Comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with other Saccharomyces species
An endo-poly-galacturonase (PGU1) gene product is responsible for the pectolytic activity in Saccharomyces bayanus. Therefore, it is of interest to document the comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with those in other Saccharomyces related spe...
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| Veröffentlicht in: | Bioinformation 2022-05, Vol.18 (5), p.864-469 |
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| creator | Vidyasagar, Chennupati Santhosh Kumar, Pasupuleti Vijayakumar, Poondla Alekya, Saggam Umamahesh, Katike Sarathi Reddy, Obulam Vijaya |
| description | An endo-poly-galacturonase (PGU1) gene product is responsible for the pectolytic activity in Saccharomyces bayanus. Therefore, it is of interest to document the comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with those in other Saccharomyces related species. The molecular docking analyses of pectin with the different homology models of PGU1 protein from several Saccharomyces species are reported. |
| doi_str_mv | 10.6026/97320630018464 |
| format | Article |
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Therefore, it is of interest to document the comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with those in other Saccharomyces related species. The molecular docking analyses of pectin with the different homology models of PGU1 protein from several Saccharomyces species are reported.</description><identifier>ISSN: 0973-2063</identifier><identifier>ISSN: 0973-8894</identifier><identifier>EISSN: 0973-2063</identifier><identifier>DOI: 10.6026/97320630018464</identifier><identifier>PMID: 36945224</identifier><language>eng</language><publisher>Singapore: Biomedical Informatics</publisher><subject>Functional analysis ; Fungi ; Homology ; Molecular docking ; Pectin ; Proteins ; Saccharomyces ; Saccharomyces bayanus ; Species ; Structure-function relationships</subject><ispartof>Bioinformation, 2022-05, Vol.18 (5), p.864-469</ispartof><rights>2022 Biomedical Informatics.</rights><rights>Copyright Biomedical Informatics May 2022</rights><rights>2022 Biomedical Informatics 2022</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c349t-b7fd7c6b96a9f05cd26a76a3c447c468f1b30ba63226ef79a348d175a35db0c13</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10024774/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10024774/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36945224$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Vidyasagar, Chennupati</creatorcontrib><creatorcontrib>Santhosh Kumar, Pasupuleti</creatorcontrib><creatorcontrib>Vijayakumar, Poondla</creatorcontrib><creatorcontrib>Alekya, Saggam</creatorcontrib><creatorcontrib>Umamahesh, Katike</creatorcontrib><creatorcontrib>Sarathi Reddy, Obulam Vijaya</creatorcontrib><creatorcontrib>Department of Biochemistry, S.V.University, Tirupati 517 502, India</creatorcontrib><title>Comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with other Saccharomyces species</title><title>Bioinformation</title><addtitle>Bioinformation</addtitle><description>An endo-poly-galacturonase (PGU1) gene product is responsible for the pectolytic activity in Saccharomyces bayanus. 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The molecular docking analyses of pectin with the different homology models of PGU1 protein from several Saccharomyces species are reported.</description><subject>Functional analysis</subject><subject>Fungi</subject><subject>Homology</subject><subject>Molecular docking</subject><subject>Pectin</subject><subject>Proteins</subject><subject>Saccharomyces</subject><subject>Saccharomyces bayanus</subject><subject>Species</subject><subject>Structure-function relationships</subject><issn>0973-2063</issn><issn>0973-8894</issn><issn>0973-2063</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><recordid>eNpdkU1P3DAQhi0EAkp77RFZ4tLLgr9iJ6eqWrW0ElKRYM_WxLG7RkkcbAe0l_72emGLgNN8-JlXM34R-kzJuSRMXjSKMyI5IbQWUuyhY1I6i21r_1V-hD6kdEeIoEpVh-iIy0ZUjIlj9HcZhgkiZP9gccpxNnmO0GMYO-zm0WQfxqcS-k3yCQeH89ri68sVxVMM2foRuxgGfAPGrKFkG2MTbmED45zwo89rHMpEfAekyRpv00d04KBP9tMunqDVj--3y5-Lq9-Xv5bfrhaGiyYvWuU6ZWTbSGgcqUzHJCgJ3AihjJC1oy0nLUjOmLRONcBF3VFVAa-6lhjKT9DXZ91pbgfbGTvmcqWeoh8gbnQAr9--jH6t_4QHTQlhQilRFL7sFGK4n23KevDJ2L6H0YY5aabqRlFWc1XQs3foXZhj-cFCSdXUFZN0u9L5M2ViSCla97INJXrrrX7rbRk4fX3DC_7fTP4PNl2hcw</recordid><startdate>20220531</startdate><enddate>20220531</enddate><creator>Vidyasagar, Chennupati</creator><creator>Santhosh Kumar, Pasupuleti</creator><creator>Vijayakumar, Poondla</creator><creator>Alekya, Saggam</creator><creator>Umamahesh, Katike</creator><creator>Sarathi Reddy, Obulam Vijaya</creator><general>Biomedical Informatics</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20220531</creationdate><title>Comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with other Saccharomyces species</title><author>Vidyasagar, Chennupati ; 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| subjects | Functional analysis Fungi Homology Molecular docking Pectin Proteins Saccharomyces Saccharomyces bayanus Species Structure-function relationships |
| title | Comparative structural and functional analysis of the PGU1 protein from Saccharomyces bayanus with other Saccharomyces species |
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