Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina
A collection of rhizobial isolates from nodules of wild beans, Phaseolus vulgaris var. aborigineus, found growing in virgin lands in 17 geographically separate sites in northwest Argentina was characterized on the basis of host range, growth, hybridization to a nifH probe, analysis of genes coding f...
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| Veröffentlicht in: | Applied and Environmental Microbiology 1998-09, Vol.64 (9), p.3520-3524 |
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| creator | Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.) Lopez, M.V Riccillo, P.M Gonzalez, R.A Pagano, M Grasso, D.H Puhler, A Favelukes, G |
| description | A collection of rhizobial isolates from nodules of wild beans, Phaseolus vulgaris var. aborigineus, found growing in virgin lands in 17 geographically separate sites in northwest Argentina was characterized on the basis of host range, growth, hybridization to a nifH probe, analysis of genes coding for 16S rRNA (16S rDNA), DNA fingerprinting, and plasmid profiles. Nodules in field-collected wild bean plants were largely dominated by rhizobia carrying the 16S rDNA allele of Rhizobium etli. A similar prevalence of the R. etli allele was observed among rhizobia trapped from nearby soil. Intragroup diversity of wild bean isolates with either R. etli-like or Rhizobium leguminosarum bv. phaseoli-like alleles was generally found across northwest Argentina. The predominance of the R. etli allele suggests that in this center of origin of P. vulgaris the coevolution of Rhizobium spp. and primitive beans has resulted in this preferential symbiotic association |
| doi_str_mv | 10.1128/aem.64.9.3520-3524.1998 |
| format | Article |
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(Universidad Nacional de La Plata, La Plata, Argentina.) ; Lopez, M.V ; Riccillo, P.M ; Gonzalez, R.A ; Pagano, M ; Grasso, D.H ; Puhler, A ; Favelukes, G</creator><creatorcontrib>Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.) ; Lopez, M.V ; Riccillo, P.M ; Gonzalez, R.A ; Pagano, M ; Grasso, D.H ; Puhler, A ; Favelukes, G</creatorcontrib><description>A collection of rhizobial isolates from nodules of wild beans, Phaseolus vulgaris var. aborigineus, found growing in virgin lands in 17 geographically separate sites in northwest Argentina was characterized on the basis of host range, growth, hybridization to a nifH probe, analysis of genes coding for 16S rRNA (16S rDNA), DNA fingerprinting, and plasmid profiles. Nodules in field-collected wild bean plants were largely dominated by rhizobia carrying the 16S rDNA allele of Rhizobium etli. A similar prevalence of the R. etli allele was observed among rhizobia trapped from nearby soil. Intragroup diversity of wild bean isolates with either R. etli-like or Rhizobium leguminosarum bv. phaseoli-like alleles was generally found across northwest Argentina. The predominance of the R. etli allele suggests that in this center of origin of P. vulgaris the coevolution of Rhizobium spp. and primitive beans has resulted in this preferential symbiotic association</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>DOI: 10.1128/aem.64.9.3520-3524.1998</identifier><identifier>PMID: 9726909</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>ADN ; Agronomy. Soil science and plant productions ; Alleles ; ARGENTINA ; ARGENTINE ; Base Sequence ; Beans ; Biological and medical sciences ; Deoxyribonucleic acid ; DNA ; DNA Fingerprinting ; DNA, Ribosomal - analysis ; Economic plant physiology ; Fabaceae - microbiology ; Fundamental and applied biological sciences. Psychology ; GENBANK/AF071113 ; GENBANK/AF071114 ; GENBANK/AF071115 ; GENBANK/AF071116 ; GENBANK/AF071117 ; GENBANK/AF071118 ; GENBANK/AF071119 ; GENBANK/AF071120 ; Genes ; Genes, Bacterial ; Genes, rRNA ; Microbiology ; MOLECULAR SEQUENCE DATA ; Nitrogenase - genetics ; NUCLEOTIDE SEQUENCE ; Oxidoreductases ; Phaseolus vulgaris ; Phylogeny ; Plant Microbiology ; Plants, Medicinal ; Plasmids - genetics ; RHIZOBIUM ; Rhizobium - genetics ; Rhizobium etli ; Rhizobium leguminosarum ; Ribonucleic acid ; RIBOSOMAS ; RIBOSOME ; RIBOSOMES ; RNA ; RNA, Ribosomal, 16S - genetics ; SECUENCIA NUCLEOTIDICA ; SEQUENCE NUCLEOTIDIQUE ; Symbiosis ; Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</subject><ispartof>Applied and Environmental Microbiology, 1998-09, Vol.64 (9), p.3520-3524</ispartof><rights>1999 INIST-CNRS</rights><rights>Copyright American Society for Microbiology Sep 1998</rights><rights>Copyright © 1998, American Society for Microbiology 1998</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c546t-f39016090076b01d739141342b19cd50effcddc4450b1275cf2b67cf50bcb8043</citedby><cites>FETCH-LOGICAL-c546t-f39016090076b01d739141342b19cd50effcddc4450b1275cf2b67cf50bcb8043</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC106759/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC106759/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,3176,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=1635974$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9726909$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.)</creatorcontrib><creatorcontrib>Lopez, M.V</creatorcontrib><creatorcontrib>Riccillo, P.M</creatorcontrib><creatorcontrib>Gonzalez, R.A</creatorcontrib><creatorcontrib>Pagano, M</creatorcontrib><creatorcontrib>Grasso, D.H</creatorcontrib><creatorcontrib>Puhler, A</creatorcontrib><creatorcontrib>Favelukes, G</creatorcontrib><title>Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>A collection of rhizobial isolates from nodules of wild beans, Phaseolus vulgaris var. aborigineus, found growing in virgin lands in 17 geographically separate sites in northwest Argentina was characterized on the basis of host range, growth, hybridization to a nifH probe, analysis of genes coding for 16S rRNA (16S rDNA), DNA fingerprinting, and plasmid profiles. Nodules in field-collected wild bean plants were largely dominated by rhizobia carrying the 16S rDNA allele of Rhizobium etli. A similar prevalence of the R. etli allele was observed among rhizobia trapped from nearby soil. Intragroup diversity of wild bean isolates with either R. etli-like or Rhizobium leguminosarum bv. phaseoli-like alleles was generally found across northwest Argentina. The predominance of the R. etli allele suggests that in this center of origin of P. vulgaris the coevolution of Rhizobium spp. and primitive beans has resulted in this preferential symbiotic association</description><subject>ADN</subject><subject>Agronomy. Soil science and plant productions</subject><subject>Alleles</subject><subject>ARGENTINA</subject><subject>ARGENTINE</subject><subject>Base Sequence</subject><subject>Beans</subject><subject>Biological and medical sciences</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA Fingerprinting</subject><subject>DNA, Ribosomal - analysis</subject><subject>Economic plant physiology</subject><subject>Fabaceae - microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>GENBANK/AF071113</subject><subject>GENBANK/AF071114</subject><subject>GENBANK/AF071115</subject><subject>GENBANK/AF071116</subject><subject>GENBANK/AF071117</subject><subject>GENBANK/AF071118</subject><subject>GENBANK/AF071119</subject><subject>GENBANK/AF071120</subject><subject>Genes</subject><subject>Genes, Bacterial</subject><subject>Genes, rRNA</subject><subject>Microbiology</subject><subject>MOLECULAR SEQUENCE DATA</subject><subject>Nitrogenase - genetics</subject><subject>NUCLEOTIDE SEQUENCE</subject><subject>Oxidoreductases</subject><subject>Phaseolus vulgaris</subject><subject>Phylogeny</subject><subject>Plant Microbiology</subject><subject>Plants, Medicinal</subject><subject>Plasmids - genetics</subject><subject>RHIZOBIUM</subject><subject>Rhizobium - genetics</subject><subject>Rhizobium etli</subject><subject>Rhizobium leguminosarum</subject><subject>Ribonucleic acid</subject><subject>RIBOSOMAS</subject><subject>RIBOSOME</subject><subject>RIBOSOMES</subject><subject>RNA</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>SECUENCIA NUCLEOTIDICA</subject><subject>SEQUENCE NUCLEOTIDIQUE</subject><subject>Symbiosis</subject><subject>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFUk1v1DAQjRCoLIWfgDAIccsyThw7PnBYVeVDKi3q0rPlOM7GxbEXO2kFP41fh9NddYELlxnZ896b8fhl2QsMS4yL-q3Uw5KSJV-WVQF5CmSJOa8fZAsMvM6rsqQPswUA53lREHicPYnxGgAI0PooO-KsoBz4Ivv1JegbabVTGvkOjb1Gl7356RszDUiP1uTWfNNIWqutRsahjXY6IuVb4zao8wFhukbh8nyF5ODT1axgXGsSzk8RhZ2YtGjrt5OVo_EuJt7kWiRj9MrIUbfo1ox9CrZFjZYzIPjhTmrtp5SCQyvXpr5pgFVI0qNx8mn2qJM26mf7fJxdvT_9evIxP7v48OlkdZaritAx70oOmAIHYLQB3LKSY4JLUjSYq7YC3XWqbRUhFTS4YJXqioYy1aWjamog5XH2bqe7nZpBtyp1D9KKbTCDDD-El0b8XXGmFxt_IzBQVvHEf7PnB_990nEUg4lKWyudTisSrKxrwmv8XyBmuGYEswR89Q_w2k_BpSWIAipOAO5AbAdSwccYdHc_MQYxe0isTj8LSgQXs4fmQMTsocR8_ueD73l706T6631dRiVtF6RTJh7kaVlxNu_t5Q7Wm01_a4IWMg4iGffQ9NCqk17ITUgyV-s0RPqtsqBQ_garaOcQ</recordid><startdate>19980901</startdate><enddate>19980901</enddate><creator>Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.)</creator><creator>Lopez, M.V</creator><creator>Riccillo, P.M</creator><creator>Gonzalez, R.A</creator><creator>Pagano, M</creator><creator>Grasso, D.H</creator><creator>Puhler, A</creator><creator>Favelukes, G</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>19980901</creationdate><title>Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina</title><author>Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.) ; Lopez, M.V ; Riccillo, P.M ; Gonzalez, R.A ; Pagano, M ; Grasso, D.H ; Puhler, A ; Favelukes, G</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c546t-f39016090076b01d739141342b19cd50effcddc4450b1275cf2b67cf50bcb8043</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>ADN</topic><topic>Agronomy. Soil science and plant productions</topic><topic>Alleles</topic><topic>ARGENTINA</topic><topic>ARGENTINE</topic><topic>Base Sequence</topic><topic>Beans</topic><topic>Biological and medical sciences</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>DNA Fingerprinting</topic><topic>DNA, Ribosomal - analysis</topic><topic>Economic plant physiology</topic><topic>Fabaceae - microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>GENBANK/AF071113</topic><topic>GENBANK/AF071114</topic><topic>GENBANK/AF071115</topic><topic>GENBANK/AF071116</topic><topic>GENBANK/AF071117</topic><topic>GENBANK/AF071118</topic><topic>GENBANK/AF071119</topic><topic>GENBANK/AF071120</topic><topic>Genes</topic><topic>Genes, Bacterial</topic><topic>Genes, rRNA</topic><topic>Microbiology</topic><topic>MOLECULAR SEQUENCE DATA</topic><topic>Nitrogenase - genetics</topic><topic>NUCLEOTIDE SEQUENCE</topic><topic>Oxidoreductases</topic><topic>Phaseolus vulgaris</topic><topic>Phylogeny</topic><topic>Plant Microbiology</topic><topic>Plants, Medicinal</topic><topic>Plasmids - genetics</topic><topic>RHIZOBIUM</topic><topic>Rhizobium - genetics</topic><topic>Rhizobium etli</topic><topic>Rhizobium leguminosarum</topic><topic>Ribonucleic acid</topic><topic>RIBOSOMAS</topic><topic>RIBOSOME</topic><topic>RIBOSOMES</topic><topic>RNA</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>SECUENCIA NUCLEOTIDICA</topic><topic>SEQUENCE NUCLEOTIDIQUE</topic><topic>Symbiosis</topic><topic>Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...)</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.)</creatorcontrib><creatorcontrib>Lopez, M.V</creatorcontrib><creatorcontrib>Riccillo, P.M</creatorcontrib><creatorcontrib>Gonzalez, R.A</creatorcontrib><creatorcontrib>Pagano, M</creatorcontrib><creatorcontrib>Grasso, D.H</creatorcontrib><creatorcontrib>Puhler, A</creatorcontrib><creatorcontrib>Favelukes, G</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and Environmental Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Aguilar, O.M. (Universidad Nacional de La Plata, La Plata, Argentina.)</au><au>Lopez, M.V</au><au>Riccillo, P.M</au><au>Gonzalez, R.A</au><au>Pagano, M</au><au>Grasso, D.H</au><au>Puhler, A</au><au>Favelukes, G</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>1998-09-01</date><risdate>1998</risdate><volume>64</volume><issue>9</issue><spage>3520</spage><epage>3524</epage><pages>3520-3524</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>A collection of rhizobial isolates from nodules of wild beans, Phaseolus vulgaris var. aborigineus, found growing in virgin lands in 17 geographically separate sites in northwest Argentina was characterized on the basis of host range, growth, hybridization to a nifH probe, analysis of genes coding for 16S rRNA (16S rDNA), DNA fingerprinting, and plasmid profiles. Nodules in field-collected wild bean plants were largely dominated by rhizobia carrying the 16S rDNA allele of Rhizobium etli. A similar prevalence of the R. etli allele was observed among rhizobia trapped from nearby soil. Intragroup diversity of wild bean isolates with either R. etli-like or Rhizobium leguminosarum bv. phaseoli-like alleles was generally found across northwest Argentina. The predominance of the R. etli allele suggests that in this center of origin of P. vulgaris the coevolution of Rhizobium spp. and primitive beans has resulted in this preferential symbiotic association</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>9726909</pmid><doi>10.1128/aem.64.9.3520-3524.1998</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Applied and Environmental Microbiology, 1998-09, Vol.64 (9), p.3520-3524 |
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| language | eng |
| recordid | cdi_pubmed_primary_9726909 |
| source | American Society for Microbiology; MEDLINE; PubMed Central; Alma/SFX Local Collection |
| subjects | ADN Agronomy. Soil science and plant productions Alleles ARGENTINA ARGENTINE Base Sequence Beans Biological and medical sciences Deoxyribonucleic acid DNA DNA Fingerprinting DNA, Ribosomal - analysis Economic plant physiology Fabaceae - microbiology Fundamental and applied biological sciences. Psychology GENBANK/AF071113 GENBANK/AF071114 GENBANK/AF071115 GENBANK/AF071116 GENBANK/AF071117 GENBANK/AF071118 GENBANK/AF071119 GENBANK/AF071120 Genes Genes, Bacterial Genes, rRNA Microbiology MOLECULAR SEQUENCE DATA Nitrogenase - genetics NUCLEOTIDE SEQUENCE Oxidoreductases Phaseolus vulgaris Phylogeny Plant Microbiology Plants, Medicinal Plasmids - genetics RHIZOBIUM Rhizobium - genetics Rhizobium etli Rhizobium leguminosarum Ribonucleic acid RIBOSOMAS RIBOSOME RIBOSOMES RNA RNA, Ribosomal, 16S - genetics SECUENCIA NUCLEOTIDICA SEQUENCE NUCLEOTIDIQUE Symbiosis Symbiosis (nodules, symbiotic nitrogen fixation, mycorrhiza...) |
| title | Prevalence of the Rhizobium etli-like allele in genes coding for 16S rRNA among the indigenous rhizobial populations found associated with wild beans from the Southern Andes in Argentina |
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