Building a Synthetic Vascular Model: Evaluation in an Intracranial Aneurysms Detection Scenario
We hereby present a full synthetic model, able to mimic the various constituents of the cerebral vascular tree, including the cerebral arteries, bifurcations and intracranial aneurysms. This model intends to provide a substantial dataset of brain arteries which could be used by a 3D convolutional ne...
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description | We hereby present a full synthetic model, able to mimic the various constituents of the cerebral vascular tree, including the cerebral arteries, bifurcations and intracranial aneurysms. This model intends to provide a substantial dataset of brain arteries which could be used by a 3D convolutional neural network to efficiently detect Intra-Cranial Aneurysms. The cerebral aneurysms most often occur on a particular structure of the vascular tree named the Circle of Willis. Various studies have been conducted to detect and monitor the aneurysms and those based on Deep Learning achieve the best performance. Specifically, in this work, we propose a full synthetic 3D model able to mimic the brain vasculature as acquired by Magnetic Resonance Angiography, Time Of Flight principle. Among the various MRI modalities, this latter allows for a good rendering of the blood vessels and is non-invasive. Our model has been designed to simultaneously mimic the arteries' geometry, the aneurysm shape, and the background noise. The vascular tree geometry is modeled thanks to an interpolation with 3D Spline functions, and the statistical properties of the background noise is collected from angiography acquisitions and reproduced within the model. In this work, we thoroughly describe the synthetic vasculature model, we build up a neural network designed for aneurysm segmentation and detection, finally, we carry out an in-depth evaluation of the performance gap gained thanks to the synthetic model data augmentation. |
doi_str_mv | 10.1109/TMI.2024.3492313 |
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This model intends to provide a substantial dataset of brain arteries which could be used by a 3D convolutional neural network to efficiently detect Intra-Cranial Aneurysms. The cerebral aneurysms most often occur on a particular structure of the vascular tree named the Circle of Willis. Various studies have been conducted to detect and monitor the aneurysms and those based on Deep Learning achieve the best performance. Specifically, in this work, we propose a full synthetic 3D model able to mimic the brain vasculature as acquired by Magnetic Resonance Angiography, Time Of Flight principle. Among the various MRI modalities, this latter allows for a good rendering of the blood vessels and is non-invasive. Our model has been designed to simultaneously mimic the arteries' geometry, the aneurysm shape, and the background noise. The vascular tree geometry is modeled thanks to an interpolation with 3D Spline functions, and the statistical properties of the background noise is collected from angiography acquisitions and reproduced within the model. 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This model intends to provide a substantial dataset of brain arteries which could be used by a 3D convolutional neural network to efficiently detect Intra-Cranial Aneurysms. The cerebral aneurysms most often occur on a particular structure of the vascular tree named the Circle of Willis. Various studies have been conducted to detect and monitor the aneurysms and those based on Deep Learning achieve the best performance. Specifically, in this work, we propose a full synthetic 3D model able to mimic the brain vasculature as acquired by Magnetic Resonance Angiography, Time Of Flight principle. Among the various MRI modalities, this latter allows for a good rendering of the blood vessels and is non-invasive. Our model has been designed to simultaneously mimic the arteries' geometry, the aneurysm shape, and the background noise. The vascular tree geometry is modeled thanks to an interpolation with 3D Spline functions, and the statistical properties of the background noise is collected from angiography acquisitions and reproduced within the model. In this work, we thoroughly describe the synthetic vasculature model, we build up a neural network designed for aneurysm segmentation and detection, finally, we carry out an in-depth evaluation of the performance gap gained thanks to the synthetic model data augmentation.</description><subject>Aneurysm</subject><subject>Arteries</subject><subject>Bifurcation</subject><subject>Biomedical imaging</subject><subject>Computational modeling</subject><subject>Deep Learning</subject><subject>Image segmentation</subject><subject>IntraCranial Aneurysms detection</subject><subject>Shape</subject><subject>Solid modeling</subject><subject>Splines (mathematics)</subject><subject>Synthetic artery/bifurcation model</subject><subject>Three-dimensional displays</subject><issn>0278-0062</issn><issn>1558-254X</issn><issn>1558-254X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>RIE</sourceid><recordid>eNpNkDtPwzAYRS0EglLYGRDyyJLiZxyzlVKgUisGHmKzHOcDjFIH7ASp_55AC2K6y7lnOAgdUTKilOiz-8VsxAgTIy4045RvoQGVssiYFE_baECYKjJCcraH9lN6I4QKSfQu2uNaEsEKOUDmovN15cMLtvhuFdpXaL3Djza5rrYRL5oK6nM8_bR1Z1vfBOwDtgHPQhutizZ4W-NxgC6u0jLhS2jB_WB3DoKNvjlAO8-2TnC42SF6uJreT26y-e31bDKeZ47SQmYUpC4tyUvqnLZFVTFFNQgBlvJSaAmU5ZpznbtSSaUrpnkunOJMaam14HyITtfe99h8dJBas_TJQV3bAE2XDKd9k0IIqnqUrFEXm5QiPJv36Jc2rgwl5jur6bOa76xmk7W_nGzsXbmE6u_w27EHjteAB4B_PiVkzhT_AuB9euk</recordid><startdate>20241106</startdate><enddate>20241106</enddate><creator>Nader, Rafic</creator><creator>Autrusseau, Florent</creator><creator>L'Allinec, Vincent</creator><creator>Bourcier, Romain</creator><general>IEEE</general><scope>97E</scope><scope>RIA</scope><scope>RIE</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-2690-0029</orcidid></search><sort><creationdate>20241106</creationdate><title>Building a Synthetic Vascular Model: Evaluation in an Intracranial Aneurysms Detection Scenario</title><author>Nader, Rafic ; Autrusseau, Florent ; L'Allinec, Vincent ; Bourcier, Romain</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c1185-1e59ba06b1cc9a8dd2719e44ea13b495e12693396cb7579d29364c73279599433</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Aneurysm</topic><topic>Arteries</topic><topic>Bifurcation</topic><topic>Biomedical imaging</topic><topic>Computational modeling</topic><topic>Deep Learning</topic><topic>Image segmentation</topic><topic>IntraCranial Aneurysms detection</topic><topic>Shape</topic><topic>Solid modeling</topic><topic>Splines (mathematics)</topic><topic>Synthetic artery/bifurcation model</topic><topic>Three-dimensional displays</topic><toplevel>online_resources</toplevel><creatorcontrib>Nader, Rafic</creatorcontrib><creatorcontrib>Autrusseau, Florent</creatorcontrib><creatorcontrib>L'Allinec, Vincent</creatorcontrib><creatorcontrib>Bourcier, Romain</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Electronic Library (IEL)</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>IEEE transactions on medical imaging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Nader, Rafic</au><au>Autrusseau, Florent</au><au>L'Allinec, Vincent</au><au>Bourcier, Romain</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Building a Synthetic Vascular Model: Evaluation in an Intracranial Aneurysms Detection Scenario</atitle><jtitle>IEEE transactions on medical imaging</jtitle><stitle>TMI</stitle><addtitle>IEEE Trans Med Imaging</addtitle><date>2024-11-06</date><risdate>2024</risdate><volume>PP</volume><spage>1</spage><epage>1</epage><pages>1-1</pages><issn>0278-0062</issn><issn>1558-254X</issn><eissn>1558-254X</eissn><coden>ITMID4</coden><abstract>We hereby present a full synthetic model, able to mimic the various constituents of the cerebral vascular tree, including the cerebral arteries, bifurcations and intracranial aneurysms. This model intends to provide a substantial dataset of brain arteries which could be used by a 3D convolutional neural network to efficiently detect Intra-Cranial Aneurysms. The cerebral aneurysms most often occur on a particular structure of the vascular tree named the Circle of Willis. Various studies have been conducted to detect and monitor the aneurysms and those based on Deep Learning achieve the best performance. Specifically, in this work, we propose a full synthetic 3D model able to mimic the brain vasculature as acquired by Magnetic Resonance Angiography, Time Of Flight principle. Among the various MRI modalities, this latter allows for a good rendering of the blood vessels and is non-invasive. Our model has been designed to simultaneously mimic the arteries' geometry, the aneurysm shape, and the background noise. The vascular tree geometry is modeled thanks to an interpolation with 3D Spline functions, and the statistical properties of the background noise is collected from angiography acquisitions and reproduced within the model. In this work, we thoroughly describe the synthetic vasculature model, we build up a neural network designed for aneurysm segmentation and detection, finally, we carry out an in-depth evaluation of the performance gap gained thanks to the synthetic model data augmentation.</abstract><cop>United States</cop><pub>IEEE</pub><pmid>39504285</pmid><doi>10.1109/TMI.2024.3492313</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0002-2690-0029</orcidid></addata></record> |
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subjects | Aneurysm Arteries Bifurcation Biomedical imaging Computational modeling Deep Learning Image segmentation IntraCranial Aneurysms detection Shape Solid modeling Splines (mathematics) Synthetic artery/bifurcation model Three-dimensional displays |
title | Building a Synthetic Vascular Model: Evaluation in an Intracranial Aneurysms Detection Scenario |
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