Heteroatom-vacancy centres in molecular nanodiamonds: a computational study of organic molecules possessing triplet ground states through σ-overlap
Small molecules possessing a triplet ground state are fundamentally intriguing but also in high demand for applications such as quantum sensing and quantum computing. Such molecules are rare, and most examples involve extended π-systems. Topology and shape of the spin density will be very different...
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description | Small molecules possessing a triplet ground state are fundamentally intriguing but also in high demand for applications such as quantum sensing and quantum computing. Such molecules are rare, and most examples involve extended π-systems. Topology and shape of the spin density will be very different for molecules where the triplet state arises from σ-overlap. Drawing inspiration from NV
−
(anionic nitrogen-vacancy) centres in a diamond crystal, which possess triplet ground states that are robust due to the distortion-preventing crystal lattice, we investigate hetero-atom substituted diamondoids (molecular nanodiamonds) as molecular mimics for NV
−
centres. It is found that even in these small systems, distortions that stabilize singlet states are energetically costly, and the triplet states are more stable than the singlets. The stabilization of the triplet over the singlet is 13, 16, and 18 kcal mol
−1
, in anionic
C
3v
-C
33
H
36
N
−
and in the charge-neutral molecules
C
3v
-C
33
H
36
O and
C
3v
-C
33
H
36
S, respectively, using CAM-B3LYP-D3(BJ)/Def2-QZVPP. Comparable numbers are obtained with other density functional theory (DFT) methods, including double-hybrids. Wavefunction-based approaches on the other hand disagree in their predictions: While the MP2 method applied with the DLPNO approximation predicts a preference for the singlet, density matrix renormalization group (DMRG) calculations qualitatively agree with DFT in their prediction of a triplet ground state, although by a small margin, for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O, but not for
C
3v
-C
33
H
36
S. Weighing the evidence, we conclude, with reasonable confidence for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O and lesser confidence for
C
3v
-C
33
H
36
S, that the ground state for the molecular nanodiamonds studied is a triplet state.
Can doped nanodiamonds with a central vacancy be small-molecule-sized and still retain a desirable triplet ground state? Computational results are encouraging for doped and hollow decamantane derivatives of
C
3v
symmetry. |
doi_str_mv | 10.1039/d4cp02667e |
format | Article |
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−
(anionic nitrogen-vacancy) centres in a diamond crystal, which possess triplet ground states that are robust due to the distortion-preventing crystal lattice, we investigate hetero-atom substituted diamondoids (molecular nanodiamonds) as molecular mimics for NV
−
centres. It is found that even in these small systems, distortions that stabilize singlet states are energetically costly, and the triplet states are more stable than the singlets. The stabilization of the triplet over the singlet is 13, 16, and 18 kcal mol
−1
, in anionic
C
3v
-C
33
H
36
N
−
and in the charge-neutral molecules
C
3v
-C
33
H
36
O and
C
3v
-C
33
H
36
S, respectively, using CAM-B3LYP-D3(BJ)/Def2-QZVPP. Comparable numbers are obtained with other density functional theory (DFT) methods, including double-hybrids. Wavefunction-based approaches on the other hand disagree in their predictions: While the MP2 method applied with the DLPNO approximation predicts a preference for the singlet, density matrix renormalization group (DMRG) calculations qualitatively agree with DFT in their prediction of a triplet ground state, although by a small margin, for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O, but not for
C
3v
-C
33
H
36
S. Weighing the evidence, we conclude, with reasonable confidence for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O and lesser confidence for
C
3v
-C
33
H
36
S, that the ground state for the molecular nanodiamonds studied is a triplet state.
Can doped nanodiamonds with a central vacancy be small-molecule-sized and still retain a desirable triplet ground state? Computational results are encouraging for doped and hollow decamantane derivatives of
C
3v
symmetry.</description><identifier>ISSN: 1463-9076</identifier><identifier>ISSN: 1463-9084</identifier><identifier>EISSN: 1463-9084</identifier><identifier>DOI: 10.1039/d4cp02667e</identifier><identifier>PMID: 39318192</identifier><language>eng</language><publisher>England: Royal Society of Chemistry</publisher><subject>Atomic energy levels ; Crystal lattices ; Density functional theory ; Diamonds ; Ground state ; Lattice vacancies ; Nanostructure ; Organic chemistry ; Quantum computing ; Topology ; Wave functions</subject><ispartof>Physical chemistry chemical physics : PCCP, 2024-10, Vol.26 (39), p.25412-25417</ispartof><rights>Copyright Royal Society of Chemistry 2024</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c226t-ccf4afbece9c83b8865c07e0a06a4f3442daa41f3714a72a598cd55a19f3a9943</cites><orcidid>0000-0002-1049-8581 ; 0000-0001-7345-1716 ; 0000-0003-0982-3129 ; 0000-0003-0397-8410</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39318192$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Macarios, Colette Maya</creatorcontrib><creatorcontrib>Pittner, Ji í</creatorcontrib><creatorcontrib>Prasad, Viki Kumar</creatorcontrib><creatorcontrib>Fekl, Ulrich</creatorcontrib><title>Heteroatom-vacancy centres in molecular nanodiamonds: a computational study of organic molecules possessing triplet ground states through σ-overlap</title><title>Physical chemistry chemical physics : PCCP</title><addtitle>Phys Chem Chem Phys</addtitle><description>Small molecules possessing a triplet ground state are fundamentally intriguing but also in high demand for applications such as quantum sensing and quantum computing. Such molecules are rare, and most examples involve extended π-systems. Topology and shape of the spin density will be very different for molecules where the triplet state arises from σ-overlap. Drawing inspiration from NV
−
(anionic nitrogen-vacancy) centres in a diamond crystal, which possess triplet ground states that are robust due to the distortion-preventing crystal lattice, we investigate hetero-atom substituted diamondoids (molecular nanodiamonds) as molecular mimics for NV
−
centres. It is found that even in these small systems, distortions that stabilize singlet states are energetically costly, and the triplet states are more stable than the singlets. The stabilization of the triplet over the singlet is 13, 16, and 18 kcal mol
−1
, in anionic
C
3v
-C
33
H
36
N
−
and in the charge-neutral molecules
C
3v
-C
33
H
36
O and
C
3v
-C
33
H
36
S, respectively, using CAM-B3LYP-D3(BJ)/Def2-QZVPP. Comparable numbers are obtained with other density functional theory (DFT) methods, including double-hybrids. Wavefunction-based approaches on the other hand disagree in their predictions: While the MP2 method applied with the DLPNO approximation predicts a preference for the singlet, density matrix renormalization group (DMRG) calculations qualitatively agree with DFT in their prediction of a triplet ground state, although by a small margin, for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O, but not for
C
3v
-C
33
H
36
S. Weighing the evidence, we conclude, with reasonable confidence for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O and lesser confidence for
C
3v
-C
33
H
36
S, that the ground state for the molecular nanodiamonds studied is a triplet state.
Can doped nanodiamonds with a central vacancy be small-molecule-sized and still retain a desirable triplet ground state? Computational results are encouraging for doped and hollow decamantane derivatives of
C
3v
symmetry.</description><subject>Atomic energy levels</subject><subject>Crystal lattices</subject><subject>Density functional theory</subject><subject>Diamonds</subject><subject>Ground state</subject><subject>Lattice vacancies</subject><subject>Nanostructure</subject><subject>Organic chemistry</subject><subject>Quantum computing</subject><subject>Topology</subject><subject>Wave functions</subject><issn>1463-9076</issn><issn>1463-9084</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><recordid>eNpd0c1O3DAQB3CrAhVKe-kdZIlLVSnUjp0Pc0NbWpCQ6AHO0exksgQldmo7SHvuK_S9-kr1dmErcbIt_2akmT9jH6U4k0KZL63GSeRlWdEbdih1qTIjar23u1flAXsXwqMQQhZSvWUHyihZS5Mfst9XFMk7iG7MngDB4poj2egp8N7y0Q2E8wCeW7Cu7WF0tg3nHDi6cZojxN5ZGHiIc7vmruPOr8D2-FKYukwuBAqhtysefT8NFPnKu9m2qQhiAvEhPVcP_M-vzD2RH2B6z_Y7GAJ9eD6P2P23y7vFVXZz-_16cXGTYZ6XMUPsNHRLQjJYq2VdlwWKigSIEnSntM5bAC07VUkNVQ6FqbEtCpCmU2CMVkfs07bv5N3PmUJsxj4gDQNYcnNolBRG55udJXr6ij662afRN0pqrYwoZVKftwp9mtpT10y-H8GvGymaTVbNV7348S-ry4RPnlvOy5HaHX0JJ4HjLfABd7__w1Z_AYDunVM</recordid><startdate>20241009</startdate><enddate>20241009</enddate><creator>Macarios, Colette Maya</creator><creator>Pittner, Ji í</creator><creator>Prasad, Viki Kumar</creator><creator>Fekl, Ulrich</creator><general>Royal Society of Chemistry</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SR</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>JG9</scope><scope>L7M</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-1049-8581</orcidid><orcidid>https://orcid.org/0000-0001-7345-1716</orcidid><orcidid>https://orcid.org/0000-0003-0982-3129</orcidid><orcidid>https://orcid.org/0000-0003-0397-8410</orcidid></search><sort><creationdate>20241009</creationdate><title>Heteroatom-vacancy centres in molecular nanodiamonds: a computational study of organic molecules possessing triplet ground states through σ-overlap</title><author>Macarios, Colette Maya ; Pittner, Ji í ; Prasad, Viki Kumar ; Fekl, Ulrich</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c226t-ccf4afbece9c83b8865c07e0a06a4f3442daa41f3714a72a598cd55a19f3a9943</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Atomic energy levels</topic><topic>Crystal lattices</topic><topic>Density functional theory</topic><topic>Diamonds</topic><topic>Ground state</topic><topic>Lattice vacancies</topic><topic>Nanostructure</topic><topic>Organic chemistry</topic><topic>Quantum computing</topic><topic>Topology</topic><topic>Wave functions</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Macarios, Colette Maya</creatorcontrib><creatorcontrib>Pittner, Ji í</creatorcontrib><creatorcontrib>Prasad, Viki Kumar</creatorcontrib><creatorcontrib>Fekl, Ulrich</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Macarios, Colette Maya</au><au>Pittner, Ji í</au><au>Prasad, Viki Kumar</au><au>Fekl, Ulrich</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Heteroatom-vacancy centres in molecular nanodiamonds: a computational study of organic molecules possessing triplet ground states through σ-overlap</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2024-10-09</date><risdate>2024</risdate><volume>26</volume><issue>39</issue><spage>25412</spage><epage>25417</epage><pages>25412-25417</pages><issn>1463-9076</issn><issn>1463-9084</issn><eissn>1463-9084</eissn><abstract>Small molecules possessing a triplet ground state are fundamentally intriguing but also in high demand for applications such as quantum sensing and quantum computing. Such molecules are rare, and most examples involve extended π-systems. Topology and shape of the spin density will be very different for molecules where the triplet state arises from σ-overlap. Drawing inspiration from NV
−
(anionic nitrogen-vacancy) centres in a diamond crystal, which possess triplet ground states that are robust due to the distortion-preventing crystal lattice, we investigate hetero-atom substituted diamondoids (molecular nanodiamonds) as molecular mimics for NV
−
centres. It is found that even in these small systems, distortions that stabilize singlet states are energetically costly, and the triplet states are more stable than the singlets. The stabilization of the triplet over the singlet is 13, 16, and 18 kcal mol
−1
, in anionic
C
3v
-C
33
H
36
N
−
and in the charge-neutral molecules
C
3v
-C
33
H
36
O and
C
3v
-C
33
H
36
S, respectively, using CAM-B3LYP-D3(BJ)/Def2-QZVPP. Comparable numbers are obtained with other density functional theory (DFT) methods, including double-hybrids. Wavefunction-based approaches on the other hand disagree in their predictions: While the MP2 method applied with the DLPNO approximation predicts a preference for the singlet, density matrix renormalization group (DMRG) calculations qualitatively agree with DFT in their prediction of a triplet ground state, although by a small margin, for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O, but not for
C
3v
-C
33
H
36
S. Weighing the evidence, we conclude, with reasonable confidence for
C
3v
-C
33
H
36
N
−
and
C
3v
-C
33
H
36
O and lesser confidence for
C
3v
-C
33
H
36
S, that the ground state for the molecular nanodiamonds studied is a triplet state.
Can doped nanodiamonds with a central vacancy be small-molecule-sized and still retain a desirable triplet ground state? Computational results are encouraging for doped and hollow decamantane derivatives of
C
3v
symmetry.</abstract><cop>England</cop><pub>Royal Society of Chemistry</pub><pmid>39318192</pmid><doi>10.1039/d4cp02667e</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0002-1049-8581</orcidid><orcidid>https://orcid.org/0000-0001-7345-1716</orcidid><orcidid>https://orcid.org/0000-0003-0982-3129</orcidid><orcidid>https://orcid.org/0000-0003-0397-8410</orcidid></addata></record> |
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issn | 1463-9076 1463-9084 1463-9084 |
language | eng |
recordid | cdi_pubmed_primary_39318192 |
source | Royal Society Of Chemistry Journals 2008-; Alma/SFX Local Collection |
subjects | Atomic energy levels Crystal lattices Density functional theory Diamonds Ground state Lattice vacancies Nanostructure Organic chemistry Quantum computing Topology Wave functions |
title | Heteroatom-vacancy centres in molecular nanodiamonds: a computational study of organic molecules possessing triplet ground states through σ-overlap |
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