ALKBH5 regulates chicken adipogenesis by mediating LCAT mRNA stability depending on m 6 A modification

Previous studies have demonstrated the role of N6-methyladenosine (m A) RNA methylation in various biological processes, our research is the first to elucidate its specific impact on LCAT mRNA stability and adipogenesis in poultry. The 6 100-day-old female chickens were categorized into high (n = 3)...

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Veröffentlicht in:BMC genomics 2024-06, Vol.25 (1), p.634
Hauptverfasser: Chao, Xiaohuan, Guo, Lijin, Ye, Chutian, Liu, Aijun, Wang, Xiaomeng, Ye, Mao, Fan, Zhexia, Luan, Kang, Chen, Jiahao, Zhang, Chunlei, Liu, Manqing, Zhou, Bo, Zhang, Xiquan, Li, Zhenhui, Luo, Qingbin
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container_title BMC genomics
container_volume 25
creator Chao, Xiaohuan
Guo, Lijin
Ye, Chutian
Liu, Aijun
Wang, Xiaomeng
Ye, Mao
Fan, Zhexia
Luan, Kang
Chen, Jiahao
Zhang, Chunlei
Liu, Manqing
Zhou, Bo
Zhang, Xiquan
Li, Zhenhui
Luo, Qingbin
description Previous studies have demonstrated the role of N6-methyladenosine (m A) RNA methylation in various biological processes, our research is the first to elucidate its specific impact on LCAT mRNA stability and adipogenesis in poultry. The 6 100-day-old female chickens were categorized into high (n = 3) and low-fat chickens (n = 3) based on their abdominal fat ratios, and their abdominal fat tissues were processed for MeRIP-seq and RNA-seq. An integrated analysis of MeRIP-seq and RNA-seq omics data revealed 16 differentially expressed genes associated with to differential m A modifications. Among them, ELOVL fatty acid elongase 2 (ELOVL2), pyruvate dehydrogenase kinase 4 (PDK4), fatty acid binding protein 9 (PMP2), fatty acid binding protein 1 (FABP1), lysosomal associated membrane protein 3 (LAMP3), lecithin-cholesterol acyltransferase (LCAT) and solute carrier family 2 member 1 (SLC2A1) have ever been reported to be associated with adipogenesis. Interestingly, LCAT was down-regulated and expressed along with decreased levels of mRNA methylation methylation in the low-fat group. Mechanistically, the highly expressed ALKBH5 gene regulates LCAT RNA demethylation and affects LCAT mRNA stability. In addition, LCAT inhibits preadipocyte proliferation and promotes preadipocyte differentiation, and plays a key role in adipogenesis. In conclusion, ALKBH5 mediates RNA stability of LCAT through demethylation and affects chicken adipogenesis. This study provides a theoretical basis for further understanding of RNA methylation regulation in chicken adipogenesis.
doi_str_mv 10.1186/s12864-024-10537-2
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The 6 100-day-old female chickens were categorized into high (n = 3) and low-fat chickens (n = 3) based on their abdominal fat ratios, and their abdominal fat tissues were processed for MeRIP-seq and RNA-seq. An integrated analysis of MeRIP-seq and RNA-seq omics data revealed 16 differentially expressed genes associated with to differential m A modifications. Among them, ELOVL fatty acid elongase 2 (ELOVL2), pyruvate dehydrogenase kinase 4 (PDK4), fatty acid binding protein 9 (PMP2), fatty acid binding protein 1 (FABP1), lysosomal associated membrane protein 3 (LAMP3), lecithin-cholesterol acyltransferase (LCAT) and solute carrier family 2 member 1 (SLC2A1) have ever been reported to be associated with adipogenesis. Interestingly, LCAT was down-regulated and expressed along with decreased levels of mRNA methylation methylation in the low-fat group. Mechanistically, the highly expressed ALKBH5 gene regulates LCAT RNA demethylation and affects LCAT mRNA stability. 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In addition, LCAT inhibits preadipocyte proliferation and promotes preadipocyte differentiation, and plays a key role in adipogenesis. In conclusion, ALKBH5 mediates RNA stability of LCAT through demethylation and affects chicken adipogenesis. 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In addition, LCAT inhibits preadipocyte proliferation and promotes preadipocyte differentiation, and plays a key role in adipogenesis. In conclusion, ALKBH5 mediates RNA stability of LCAT through demethylation and affects chicken adipogenesis. This study provides a theoretical basis for further understanding of RNA methylation regulation in chicken adipogenesis.</abstract><cop>England</cop><pmid>38918701</pmid><doi>10.1186/s12864-024-10537-2</doi></addata></record>
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subjects Adenosine - analogs & derivatives
Adenosine - metabolism
Adipogenesis - genetics
AlkB Homolog 5, RNA Demethylase - genetics
AlkB Homolog 5, RNA Demethylase - metabolism
Animals
Chickens - genetics
Chickens - metabolism
Female
Methylation
Phosphatidylcholine-Sterol O-Acyltransferase - genetics
Phosphatidylcholine-Sterol O-Acyltransferase - metabolism
RNA Stability
RNA, Messenger - genetics
RNA, Messenger - metabolism
title ALKBH5 regulates chicken adipogenesis by mediating LCAT mRNA stability depending on m 6 A modification
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