The complete mitochondrial genome of the edible mushroom Grifola frondosa
The culinary-medicinal mushroom Grifola frondosa is widely cultivated in East Asia. In this study, the complete mitochondrial genome of G. frondosa was determined using Illumina sequencing. The circular molecule was 197,486 bp in length with a content of 25.01% GC, which was one of the largest mitoc...
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| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2022, Vol.7 (1), p.286-288 |
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| creator | Song, Ying Wan, Jianing Shang, Jun-Jun Feng, Zhan Jin, Yuchang Li, Hewen Guo, Ting Wu, Ying-Ying Bao, Da-Peng Zhang, Min Lv, Litao Liu, Junjie Yang, Rui-Heng |
| description | The culinary-medicinal mushroom Grifola frondosa is widely cultivated in East Asia. In this study, the complete mitochondrial genome of G. frondosa was determined using Illumina sequencing. The circular molecule was 197,486 bp in length with a content of 25.01% GC, which was one of the largest mitochondrial genomes in the order Polyporales. A total of 39 known genes encoding 13 common mitochondrial genes, 24 tRNA genes, 1 ribosomal protein s3 gene (rps3), and 1 DNA polymerase gene (dpo) were predicted in this genome. The phylogenetic analysis showed that G. frondosa clustered together with Sparassis crispa, Laetiporus sulphureus, Wolfiporia cocos, and Taiwanofungus camphoratus. The complete mitochondrial genome reported here may provide new insight into genetic information and evolution for further studies. |
| doi_str_mv | 10.1080/23802359.2021.1917312 |
| format | Article |
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In this study, the complete mitochondrial genome of G. frondosa was determined using Illumina sequencing. The circular molecule was 197,486 bp in length with a content of 25.01% GC, which was one of the largest mitochondrial genomes in the order Polyporales. A total of 39 known genes encoding 13 common mitochondrial genes, 24 tRNA genes, 1 ribosomal protein s3 gene (rps3), and 1 DNA polymerase gene (dpo) were predicted in this genome. The phylogenetic analysis showed that G. frondosa clustered together with Sparassis crispa, Laetiporus sulphureus, Wolfiporia cocos, and Taiwanofungus camphoratus. The complete mitochondrial genome reported here may provide new insight into genetic information and evolution for further studies.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2021.1917312</identifier><identifier>PMID: 35111939</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>DNA-directed DNA polymerase ; Gaylussacia frondosa ; Genes ; Genomes ; Grifola frondosa ; Illumina sequencing ; Mitochondria ; Mitochondrial genome ; Mitogenome Announcement ; Mushrooms ; phylogenetic analyses ; Phylogeny ; Ribosomal protein S3 ; tRNA</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2022, Vol.7 (1), p.286-288</ispartof><rights>2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2022</rights><rights>2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.</rights><rights>2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This work is licensed under the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2022 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c562t-2e9e800fdff346369e36c35298d2c34c1d1260994628e74630f0fec8f8737b493</citedby><cites>FETCH-LOGICAL-c562t-2e9e800fdff346369e36c35298d2c34c1d1260994628e74630f0fec8f8737b493</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803107/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8803107/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2100,4022,27500,27921,27922,27923,53789,53791,59141,59142</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35111939$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Song, Ying</creatorcontrib><creatorcontrib>Wan, Jianing</creatorcontrib><creatorcontrib>Shang, Jun-Jun</creatorcontrib><creatorcontrib>Feng, Zhan</creatorcontrib><creatorcontrib>Jin, Yuchang</creatorcontrib><creatorcontrib>Li, Hewen</creatorcontrib><creatorcontrib>Guo, Ting</creatorcontrib><creatorcontrib>Wu, Ying-Ying</creatorcontrib><creatorcontrib>Bao, Da-Peng</creatorcontrib><creatorcontrib>Zhang, Min</creatorcontrib><creatorcontrib>Lv, Litao</creatorcontrib><creatorcontrib>Liu, Junjie</creatorcontrib><creatorcontrib>Yang, Rui-Heng</creatorcontrib><title>The complete mitochondrial genome of the edible mushroom Grifola frondosa</title><title>Mitochondrial DNA. Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>The culinary-medicinal mushroom Grifola frondosa is widely cultivated in East Asia. In this study, the complete mitochondrial genome of G. frondosa was determined using Illumina sequencing. The circular molecule was 197,486 bp in length with a content of 25.01% GC, which was one of the largest mitochondrial genomes in the order Polyporales. A total of 39 known genes encoding 13 common mitochondrial genes, 24 tRNA genes, 1 ribosomal protein s3 gene (rps3), and 1 DNA polymerase gene (dpo) were predicted in this genome. The phylogenetic analysis showed that G. frondosa clustered together with Sparassis crispa, Laetiporus sulphureus, Wolfiporia cocos, and Taiwanofungus camphoratus. The complete mitochondrial genome reported here may provide new insight into genetic information and evolution for further studies.</description><subject>DNA-directed DNA polymerase</subject><subject>Gaylussacia frondosa</subject><subject>Genes</subject><subject>Genomes</subject><subject>Grifola frondosa</subject><subject>Illumina sequencing</subject><subject>Mitochondria</subject><subject>Mitochondrial genome</subject><subject>Mitogenome Announcement</subject><subject>Mushrooms</subject><subject>phylogenetic analyses</subject><subject>Phylogeny</subject><subject>Ribosomal protein S3</subject><subject>tRNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9kU1v1DAQhiMEolXpTwBF4sJlF38k_rggUAVlpUpcytlynPGuV05msRNQ_z1Od1u1HDjZGj_zjO23qt5SsqZEkY-MK8J4q9eMMLqmmkpO2YvqfKmvloOXT_Zn1WXOe0IIFVxKLV9XZ7yllGquz6vN7Q5qh8MhwgT1ECZ0Oxz7FGystzDiADX6eioQ9KGLBZnzLiEO9XUKHqOtfSo8ZvumeuVtzHB5Wi-qn9--3l59X938uN5cfblZuVawacVAgyLE997zRnChgQvHW6ZVzxxvHO0pE0TrRjAFshDEEw9OeSW57BrNL6rN0duj3ZtDCoNNdwZtMPcFTFtj0xRcBNNwKGYlO9KwhjJQAspc1gBT1MumK65PR9dh7gboHYxTsvGZ9PnJGHZmi7-NUoRTIovgw0mQ8NcMeTJDyA5itCPgnA0TrGWiVXK59_t_0D3OaSxfdU-VPLRghWqPlEuYcwL_eBlKzJK9ecjeLNmbU_al793Tlzx2PSRdgM9HIIwe02D_YIq9mexdxOSTHV3Ihv9_xl_uNLwV</recordid><startdate>2022</startdate><enddate>2022</enddate><creator>Song, Ying</creator><creator>Wan, Jianing</creator><creator>Shang, Jun-Jun</creator><creator>Feng, Zhan</creator><creator>Jin, Yuchang</creator><creator>Li, Hewen</creator><creator>Guo, Ting</creator><creator>Wu, Ying-Ying</creator><creator>Bao, Da-Peng</creator><creator>Zhang, Min</creator><creator>Lv, Litao</creator><creator>Liu, Junjie</creator><creator>Yang, Rui-Heng</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>2022</creationdate><title>The complete mitochondrial genome of the edible mushroom Grifola frondosa</title><author>Song, Ying ; Wan, Jianing ; Shang, Jun-Jun ; Feng, Zhan ; Jin, Yuchang ; Li, Hewen ; Guo, Ting ; Wu, Ying-Ying ; Bao, Da-Peng ; Zhang, Min ; Lv, Litao ; Liu, Junjie ; Yang, Rui-Heng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c562t-2e9e800fdff346369e36c35298d2c34c1d1260994628e74630f0fec8f8737b493</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>DNA-directed DNA polymerase</topic><topic>Gaylussacia frondosa</topic><topic>Genes</topic><topic>Genomes</topic><topic>Grifola frondosa</topic><topic>Illumina sequencing</topic><topic>Mitochondria</topic><topic>Mitochondrial genome</topic><topic>Mitogenome Announcement</topic><topic>Mushrooms</topic><topic>phylogenetic analyses</topic><topic>Phylogeny</topic><topic>Ribosomal protein S3</topic><topic>tRNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Song, Ying</creatorcontrib><creatorcontrib>Wan, Jianing</creatorcontrib><creatorcontrib>Shang, Jun-Jun</creatorcontrib><creatorcontrib>Feng, Zhan</creatorcontrib><creatorcontrib>Jin, Yuchang</creatorcontrib><creatorcontrib>Li, Hewen</creatorcontrib><creatorcontrib>Guo, Ting</creatorcontrib><creatorcontrib>Wu, Ying-Ying</creatorcontrib><creatorcontrib>Bao, Da-Peng</creatorcontrib><creatorcontrib>Zhang, Min</creatorcontrib><creatorcontrib>Lv, Litao</creatorcontrib><creatorcontrib>Liu, Junjie</creatorcontrib><creatorcontrib>Yang, Rui-Heng</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. 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In this study, the complete mitochondrial genome of G. frondosa was determined using Illumina sequencing. The circular molecule was 197,486 bp in length with a content of 25.01% GC, which was one of the largest mitochondrial genomes in the order Polyporales. A total of 39 known genes encoding 13 common mitochondrial genes, 24 tRNA genes, 1 ribosomal protein s3 gene (rps3), and 1 DNA polymerase gene (dpo) were predicted in this genome. The phylogenetic analysis showed that G. frondosa clustered together with Sparassis crispa, Laetiporus sulphureus, Wolfiporia cocos, and Taiwanofungus camphoratus. The complete mitochondrial genome reported here may provide new insight into genetic information and evolution for further studies.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>35111939</pmid><doi>10.1080/23802359.2021.1917312</doi><tpages>3</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | DNA-directed DNA polymerase Gaylussacia frondosa Genes Genomes Grifola frondosa Illumina sequencing Mitochondria Mitochondrial genome Mitogenome Announcement Mushrooms phylogenetic analyses Phylogeny Ribosomal protein S3 tRNA |
| title | The complete mitochondrial genome of the edible mushroom Grifola frondosa |
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