Nucleolin Promotes IRES-Driven Translation of Foot-and-Mouth Disease Virus by Supporting the Assembly of Translation Initiation Complexes

Nucleolin (NCL), a stress-responsive RNA-binding protein, has been implicated in the translation of internal ribosome entry site (IRES)-containing mRNAs, which encode proteins involved in cell proliferation, carcinogenesis, and viral infection (type I IRESs). However, the details of the mechanisms b...

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Veröffentlicht in:Journal of virology 2021-06, Vol.95 (13), p.e0023821
Hauptverfasser: Han, Shichong, Wang, Xiaojia, Guan, Junyong, Wu, Jinen, Zhang, Yun, Li, Pinghua, Liu, Zaixin, Abdullah, Sahibzada Waheed, Zhang, Zhihui, Jin, Ye, Sun, Shiqi, Guo, Huichen
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container_issue 13
container_start_page e0023821
container_title Journal of virology
container_volume 95
creator Han, Shichong
Wang, Xiaojia
Guan, Junyong
Wu, Jinen
Zhang, Yun
Li, Pinghua
Liu, Zaixin
Abdullah, Sahibzada Waheed
Zhang, Zhihui
Jin, Ye
Sun, Shiqi
Guo, Huichen
description Nucleolin (NCL), a stress-responsive RNA-binding protein, has been implicated in the translation of internal ribosome entry site (IRES)-containing mRNAs, which encode proteins involved in cell proliferation, carcinogenesis, and viral infection (type I IRESs). However, the details of the mechanisms by which NCL participates in IRES-driven translation have not hitherto been described. Here, we identified NCL as a protein that interacts with the IRES of foot-and-mouth disease virus (FMDV), which is a type II IRES. We also mapped the interactive regions within FMDV IRES and NCL . We found that NCL serves as a substantial regulator of FMDV IRES-driven translation but not of bulk cellular or vesicular stomatitis virus cap-dependent translation. NCL also modulates the translation of and infection by Seneca Valley virus (type III-like IRES) and classical swine fever virus (type III IRES), which suggests that its function is conserved in unrelated IRES-containing viruses. We also show that NCL affects viral replication by directly regulating the production of viral proteins and indirectly regulating FMDV RNA synthesis. Importantly, we observed that the cytoplasmic relocalization of NCL during FMDV infection is a substantial step for viral IRES-driven translation and that NCL specifically promotes the initiation phase of the translation process by recruiting translation initiation complexes to viral IRES. Finally, the functional importance of NCL in FMDV pathogenicity was confirmed . Taken together, our findings demonstrate a specific function for NCL in selective mRNA translation and identify a target for the development of a broad-spectrum class of antiviral interventions. FMDV usurps the cellular translation machinery to initiate viral protein synthesis via a mechanism driven by IRES elements. It allows the virus to shut down bulk cellular translation, while providing an advantage for its own gene expression. With limited coding capacity in its own genome, FMDV has evolved a mechanism to hijack host proteins to promote the recruitment of the host translation machinery, a process that is still not well understood. Here, we identified nucleolin (NCL) as a positive regulator of the IRES-driven translation of FMDV. Our study supports a model in which NCL relocalizes from the nucleus to the cytoplasm during the course of FMDV infection, where the cytoplasmic NCL promotes FMDV IRES-driven translation by bridging the translation initiation complexes with viral IRES. Our
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However, the details of the mechanisms by which NCL participates in IRES-driven translation have not hitherto been described. Here, we identified NCL as a protein that interacts with the IRES of foot-and-mouth disease virus (FMDV), which is a type II IRES. We also mapped the interactive regions within FMDV IRES and NCL . We found that NCL serves as a substantial regulator of FMDV IRES-driven translation but not of bulk cellular or vesicular stomatitis virus cap-dependent translation. NCL also modulates the translation of and infection by Seneca Valley virus (type III-like IRES) and classical swine fever virus (type III IRES), which suggests that its function is conserved in unrelated IRES-containing viruses. We also show that NCL affects viral replication by directly regulating the production of viral proteins and indirectly regulating FMDV RNA synthesis. Importantly, we observed that the cytoplasmic relocalization of NCL during FMDV infection is a substantial step for viral IRES-driven translation and that NCL specifically promotes the initiation phase of the translation process by recruiting translation initiation complexes to viral IRES. Finally, the functional importance of NCL in FMDV pathogenicity was confirmed . Taken together, our findings demonstrate a specific function for NCL in selective mRNA translation and identify a target for the development of a broad-spectrum class of antiviral interventions. FMDV usurps the cellular translation machinery to initiate viral protein synthesis via a mechanism driven by IRES elements. It allows the virus to shut down bulk cellular translation, while providing an advantage for its own gene expression. With limited coding capacity in its own genome, FMDV has evolved a mechanism to hijack host proteins to promote the recruitment of the host translation machinery, a process that is still not well understood. Here, we identified nucleolin (NCL) as a positive regulator of the IRES-driven translation of FMDV. Our study supports a model in which NCL relocalizes from the nucleus to the cytoplasm during the course of FMDV infection, where the cytoplasmic NCL promotes FMDV IRES-driven translation by bridging the translation initiation complexes with viral IRES. Our study demonstrates a previously uncharacterized role of NCL in the translation initiation of IRES-containing viruses, with important implications for the development of broad antiviral interventions.</description><identifier>ISSN: 0022-538X</identifier><identifier>EISSN: 1098-5514</identifier><identifier>DOI: 10.1128/JVI.00238-21</identifier><identifier>PMID: 33853964</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Animals ; Cell Line ; Cell Proliferation - genetics ; Chlorocebus aethiops ; Classical Swine Fever Virus - genetics ; Cricetinae ; Foot-and-Mouth Disease Virus - genetics ; Foot-and-Mouth Disease Virus - growth &amp; development ; Gene Expression Regulation, Viral - genetics ; Internal Ribosome Entry Sites - genetics ; Mice ; Mice, Inbred BALB C ; Nucleolin ; Peptide Chain Initiation, Translational - genetics ; Phosphoproteins - metabolism ; Picornaviridae - genetics ; RNA Interference ; RNA, Messenger - genetics ; RNA, Small Interfering - genetics ; RNA-Binding Proteins - metabolism ; Spotlight ; Swine ; Vero Cells ; Virus Replication - genetics ; Virus-Cell Interactions</subject><ispartof>Journal of virology, 2021-06, Vol.95 (13), p.e0023821</ispartof><rights>Copyright © 2021 American Society for Microbiology.</rights><rights>Copyright © 2021 American Society for Microbiology. 2021 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a461t-30b60794be2796db49d79a96ad089c134bbf51aca8560833d2bd01d5a66e67983</citedby><cites>FETCH-LOGICAL-a461t-30b60794be2796db49d79a96ad089c134bbf51aca8560833d2bd01d5a66e67983</cites><orcidid>0000-0002-1670-8607</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8315980/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC8315980/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33853964$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>López, Susana</contributor><creatorcontrib>Han, Shichong</creatorcontrib><creatorcontrib>Wang, Xiaojia</creatorcontrib><creatorcontrib>Guan, Junyong</creatorcontrib><creatorcontrib>Wu, Jinen</creatorcontrib><creatorcontrib>Zhang, Yun</creatorcontrib><creatorcontrib>Li, Pinghua</creatorcontrib><creatorcontrib>Liu, Zaixin</creatorcontrib><creatorcontrib>Abdullah, Sahibzada Waheed</creatorcontrib><creatorcontrib>Zhang, Zhihui</creatorcontrib><creatorcontrib>Jin, Ye</creatorcontrib><creatorcontrib>Sun, Shiqi</creatorcontrib><creatorcontrib>Guo, Huichen</creatorcontrib><title>Nucleolin Promotes IRES-Driven Translation of Foot-and-Mouth Disease Virus by Supporting the Assembly of Translation Initiation Complexes</title><title>Journal of virology</title><addtitle>J Virol</addtitle><addtitle>J Virol</addtitle><description>Nucleolin (NCL), a stress-responsive RNA-binding protein, has been implicated in the translation of internal ribosome entry site (IRES)-containing mRNAs, which encode proteins involved in cell proliferation, carcinogenesis, and viral infection (type I IRESs). However, the details of the mechanisms by which NCL participates in IRES-driven translation have not hitherto been described. Here, we identified NCL as a protein that interacts with the IRES of foot-and-mouth disease virus (FMDV), which is a type II IRES. We also mapped the interactive regions within FMDV IRES and NCL . We found that NCL serves as a substantial regulator of FMDV IRES-driven translation but not of bulk cellular or vesicular stomatitis virus cap-dependent translation. NCL also modulates the translation of and infection by Seneca Valley virus (type III-like IRES) and classical swine fever virus (type III IRES), which suggests that its function is conserved in unrelated IRES-containing viruses. We also show that NCL affects viral replication by directly regulating the production of viral proteins and indirectly regulating FMDV RNA synthesis. Importantly, we observed that the cytoplasmic relocalization of NCL during FMDV infection is a substantial step for viral IRES-driven translation and that NCL specifically promotes the initiation phase of the translation process by recruiting translation initiation complexes to viral IRES. Finally, the functional importance of NCL in FMDV pathogenicity was confirmed . Taken together, our findings demonstrate a specific function for NCL in selective mRNA translation and identify a target for the development of a broad-spectrum class of antiviral interventions. FMDV usurps the cellular translation machinery to initiate viral protein synthesis via a mechanism driven by IRES elements. It allows the virus to shut down bulk cellular translation, while providing an advantage for its own gene expression. With limited coding capacity in its own genome, FMDV has evolved a mechanism to hijack host proteins to promote the recruitment of the host translation machinery, a process that is still not well understood. Here, we identified nucleolin (NCL) as a positive regulator of the IRES-driven translation of FMDV. Our study supports a model in which NCL relocalizes from the nucleus to the cytoplasm during the course of FMDV infection, where the cytoplasmic NCL promotes FMDV IRES-driven translation by bridging the translation initiation complexes with viral IRES. Our study demonstrates a previously uncharacterized role of NCL in the translation initiation of IRES-containing viruses, with important implications for the development of broad antiviral interventions.</description><subject>Animals</subject><subject>Cell Line</subject><subject>Cell Proliferation - genetics</subject><subject>Chlorocebus aethiops</subject><subject>Classical Swine Fever Virus - genetics</subject><subject>Cricetinae</subject><subject>Foot-and-Mouth Disease Virus - genetics</subject><subject>Foot-and-Mouth Disease Virus - growth &amp; development</subject><subject>Gene Expression Regulation, Viral - genetics</subject><subject>Internal Ribosome Entry Sites - genetics</subject><subject>Mice</subject><subject>Mice, Inbred BALB C</subject><subject>Nucleolin</subject><subject>Peptide Chain Initiation, Translational - genetics</subject><subject>Phosphoproteins - metabolism</subject><subject>Picornaviridae - genetics</subject><subject>RNA Interference</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Small Interfering - genetics</subject><subject>RNA-Binding Proteins - metabolism</subject><subject>Spotlight</subject><subject>Swine</subject><subject>Vero Cells</subject><subject>Virus Replication - genetics</subject><subject>Virus-Cell Interactions</subject><issn>0022-538X</issn><issn>1098-5514</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kUFPGzEQha0KVFLaG2fkKxIGe-117AsSClBShbZqKOJm2btO4mjXXtle1PyE_muWpiA4cJrRzHufZvQAOCD4hJBCnH67m55gXFCBCvIBjAiWApUlYTtgNIwLVFJxvwc-pbTGmDDG2UewR6koqeRsBP5-76vGhsZ5-DOGNmSb4PTX5RxdRPdgPbyN2qdGZxc8DAt4FUJG2tfoJvR5BS9csjpZeOdin6DZwHnfdSFm55cwryw8T8m2ptk8WV-Tpt5lt20noe0a-8emz2B3oZtkv_yv--D31eXt5BrNfnydTs5nSDNOMqLYcDyWzNhiLHltmKzHUkuuayxkRSgzZlESXWlRciworQtTY1KXmnPLx1LQfXC25Xa9aW1dWZ-jblQXXavjRgXt1NuNdyu1DA9KUFJKgQfA8RZQxZBStIsXL8HqKRI1RKL-RaIKMsiPtnKd2kKtQx_98N572sPXt72An_Oij7EIly4</recordid><startdate>20210610</startdate><enddate>20210610</enddate><creator>Han, Shichong</creator><creator>Wang, Xiaojia</creator><creator>Guan, Junyong</creator><creator>Wu, Jinen</creator><creator>Zhang, Yun</creator><creator>Li, Pinghua</creator><creator>Liu, Zaixin</creator><creator>Abdullah, Sahibzada Waheed</creator><creator>Zhang, Zhihui</creator><creator>Jin, Ye</creator><creator>Sun, Shiqi</creator><creator>Guo, Huichen</creator><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-1670-8607</orcidid></search><sort><creationdate>20210610</creationdate><title>Nucleolin Promotes IRES-Driven Translation of Foot-and-Mouth Disease Virus by Supporting the Assembly of Translation Initiation Complexes</title><author>Han, Shichong ; Wang, Xiaojia ; Guan, Junyong ; Wu, Jinen ; Zhang, Yun ; Li, Pinghua ; Liu, Zaixin ; Abdullah, Sahibzada Waheed ; Zhang, Zhihui ; Jin, Ye ; Sun, Shiqi ; Guo, Huichen</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a461t-30b60794be2796db49d79a96ad089c134bbf51aca8560833d2bd01d5a66e67983</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Animals</topic><topic>Cell Line</topic><topic>Cell Proliferation - genetics</topic><topic>Chlorocebus aethiops</topic><topic>Classical Swine Fever Virus - genetics</topic><topic>Cricetinae</topic><topic>Foot-and-Mouth Disease Virus - genetics</topic><topic>Foot-and-Mouth Disease Virus - growth &amp; development</topic><topic>Gene Expression Regulation, Viral - genetics</topic><topic>Internal Ribosome Entry Sites - genetics</topic><topic>Mice</topic><topic>Mice, Inbred BALB C</topic><topic>Nucleolin</topic><topic>Peptide Chain Initiation, Translational - genetics</topic><topic>Phosphoproteins - metabolism</topic><topic>Picornaviridae - genetics</topic><topic>RNA Interference</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Small Interfering - genetics</topic><topic>RNA-Binding Proteins - metabolism</topic><topic>Spotlight</topic><topic>Swine</topic><topic>Vero Cells</topic><topic>Virus Replication - genetics</topic><topic>Virus-Cell Interactions</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Han, Shichong</creatorcontrib><creatorcontrib>Wang, Xiaojia</creatorcontrib><creatorcontrib>Guan, Junyong</creatorcontrib><creatorcontrib>Wu, Jinen</creatorcontrib><creatorcontrib>Zhang, Yun</creatorcontrib><creatorcontrib>Li, Pinghua</creatorcontrib><creatorcontrib>Liu, Zaixin</creatorcontrib><creatorcontrib>Abdullah, Sahibzada Waheed</creatorcontrib><creatorcontrib>Zhang, Zhihui</creatorcontrib><creatorcontrib>Jin, Ye</creatorcontrib><creatorcontrib>Sun, Shiqi</creatorcontrib><creatorcontrib>Guo, Huichen</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Journal of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Han, Shichong</au><au>Wang, Xiaojia</au><au>Guan, Junyong</au><au>Wu, Jinen</au><au>Zhang, Yun</au><au>Li, Pinghua</au><au>Liu, Zaixin</au><au>Abdullah, Sahibzada Waheed</au><au>Zhang, Zhihui</au><au>Jin, Ye</au><au>Sun, Shiqi</au><au>Guo, Huichen</au><au>López, Susana</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Nucleolin Promotes IRES-Driven Translation of Foot-and-Mouth Disease Virus by Supporting the Assembly of Translation Initiation Complexes</atitle><jtitle>Journal of virology</jtitle><stitle>J Virol</stitle><addtitle>J Virol</addtitle><date>2021-06-10</date><risdate>2021</risdate><volume>95</volume><issue>13</issue><spage>e0023821</spage><pages>e0023821-</pages><issn>0022-538X</issn><eissn>1098-5514</eissn><abstract>Nucleolin (NCL), a stress-responsive RNA-binding protein, has been implicated in the translation of internal ribosome entry site (IRES)-containing mRNAs, which encode proteins involved in cell proliferation, carcinogenesis, and viral infection (type I IRESs). However, the details of the mechanisms by which NCL participates in IRES-driven translation have not hitherto been described. Here, we identified NCL as a protein that interacts with the IRES of foot-and-mouth disease virus (FMDV), which is a type II IRES. We also mapped the interactive regions within FMDV IRES and NCL . We found that NCL serves as a substantial regulator of FMDV IRES-driven translation but not of bulk cellular or vesicular stomatitis virus cap-dependent translation. NCL also modulates the translation of and infection by Seneca Valley virus (type III-like IRES) and classical swine fever virus (type III IRES), which suggests that its function is conserved in unrelated IRES-containing viruses. We also show that NCL affects viral replication by directly regulating the production of viral proteins and indirectly regulating FMDV RNA synthesis. Importantly, we observed that the cytoplasmic relocalization of NCL during FMDV infection is a substantial step for viral IRES-driven translation and that NCL specifically promotes the initiation phase of the translation process by recruiting translation initiation complexes to viral IRES. Finally, the functional importance of NCL in FMDV pathogenicity was confirmed . Taken together, our findings demonstrate a specific function for NCL in selective mRNA translation and identify a target for the development of a broad-spectrum class of antiviral interventions. FMDV usurps the cellular translation machinery to initiate viral protein synthesis via a mechanism driven by IRES elements. It allows the virus to shut down bulk cellular translation, while providing an advantage for its own gene expression. With limited coding capacity in its own genome, FMDV has evolved a mechanism to hijack host proteins to promote the recruitment of the host translation machinery, a process that is still not well understood. Here, we identified nucleolin (NCL) as a positive regulator of the IRES-driven translation of FMDV. Our study supports a model in which NCL relocalizes from the nucleus to the cytoplasm during the course of FMDV infection, where the cytoplasmic NCL promotes FMDV IRES-driven translation by bridging the translation initiation complexes with viral IRES. Our study demonstrates a previously uncharacterized role of NCL in the translation initiation of IRES-containing viruses, with important implications for the development of broad antiviral interventions.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>33853964</pmid><doi>10.1128/JVI.00238-21</doi><tpages>22</tpages><orcidid>https://orcid.org/0000-0002-1670-8607</orcidid><oa>free_for_read</oa></addata></record>
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subjects Animals
Cell Line
Cell Proliferation - genetics
Chlorocebus aethiops
Classical Swine Fever Virus - genetics
Cricetinae
Foot-and-Mouth Disease Virus - genetics
Foot-and-Mouth Disease Virus - growth & development
Gene Expression Regulation, Viral - genetics
Internal Ribosome Entry Sites - genetics
Mice
Mice, Inbred BALB C
Nucleolin
Peptide Chain Initiation, Translational - genetics
Phosphoproteins - metabolism
Picornaviridae - genetics
RNA Interference
RNA, Messenger - genetics
RNA, Small Interfering - genetics
RNA-Binding Proteins - metabolism
Spotlight
Swine
Vero Cells
Virus Replication - genetics
Virus-Cell Interactions
title Nucleolin Promotes IRES-Driven Translation of Foot-and-Mouth Disease Virus by Supporting the Assembly of Translation Initiation Complexes
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