Novel Negative Sense Genes in the RNA Genome of Coronaviruses

The coronavirus family consists of lipid-containing envelope viruses that have a single-stranded RNA genome that encodes 25–30 proteins in different viruses by the mechanism of positive-polarity strategy. In addition, extended open reading trnslation frames (ORFs, genes) located in a negative-sense...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Doklady. Biochemistry and biophysics 2021-05, Vol.496 (1), p.27-31
Hauptverfasser: Zhirnov, O. P., Poyarkov, S. V.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 31
container_issue 1
container_start_page 27
container_title Doklady. Biochemistry and biophysics
container_volume 496
creator Zhirnov, O. P.
Poyarkov, S. V.
description The coronavirus family consists of lipid-containing envelope viruses that have a single-stranded RNA genome that encodes 25–30 proteins in different viruses by the mechanism of positive-polarity strategy. In addition, extended open reading trnslation frames (ORFs, genes) located in a negative-sense orientation were found in the genomes of coronaviruses. The size of negative-sense genes varies in the range of 150–450 nt, which corresponds to polypeptides encoded by negative-polarity genes (negative gene proteins, NGP) with m. m. 5–30 × 10 3 kDa. Coronaviruses show marked differences from virus to virus in the number of negative genes detected. These negative-sense genes in the coronavirus genome allow this family to be considered as viruses developing an ambisense genome strategy.
doi_str_mv 10.1134/S1607672921010130
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmed_primary_33689070</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2499931516</sourcerecordid><originalsourceid>FETCH-LOGICAL-c470t-9b9b2d91f4bf093c1eb31f0837267935066de29e81f682e3c8b2d1a6855031763</originalsourceid><addsrcrecordid>eNqNkV2L1TAQhoMo7rr6A7yRgjeCVCeZNh8XLixFV2E5gqvXoe2Zns3Sk6xJe8R_b45dj18IkosMM887H7yMPebwgnOsXl5yCUoqYQSH_BDusOOc0iWC4Xe_x6rc14_Yg5SuAQQIrO-zI0SpDSg4Zq9WYUdjsaJNO7kdFZfkExXn5CkVzhfTFRUfVmf7RNhSEYaiCTH4dufinCg9ZPeGdkz06PY_YZ_evP7YvC0v3p-_a84uyr5SMJWmM51YGz5U3QAGe04d8gE0KiGVwRqkXJMwpPkgtSDsdcZ5K3VdA3Il8YSdLn1v5m5L6578FNvR3kS3beNXG1pnf694d2U3YWeVqapKYW7w7LZBDJ9nSpPdutTTOLaewpysqIwxyGu-n_X0D_Q6zNHn8xZKK8AqU3yh-hhSijQcluFg9-bYv8zJmie_XnFQ_HAjA3oBvlAXhtQ78j0dMACQQqFGniNQjZuyZcE3YfZTlj7_f2mmxUKnTPgNxZ83_nv9b_IttyQ</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2499987034</pqid></control><display><type>article</type><title>Novel Negative Sense Genes in the RNA Genome of Coronaviruses</title><source>MEDLINE</source><source>SpringerNature Journals</source><source>Web of Science - Science Citation Index Expanded - 2021&lt;img src="https://exlibris-pub.s3.amazonaws.com/fromwos-v2.jpg" /&gt;</source><creator>Zhirnov, O. P. ; Poyarkov, S. V.</creator><creatorcontrib>Zhirnov, O. P. ; Poyarkov, S. V.</creatorcontrib><description>The coronavirus family consists of lipid-containing envelope viruses that have a single-stranded RNA genome that encodes 25–30 proteins in different viruses by the mechanism of positive-polarity strategy. In addition, extended open reading trnslation frames (ORFs, genes) located in a negative-sense orientation were found in the genomes of coronaviruses. The size of negative-sense genes varies in the range of 150–450 nt, which corresponds to polypeptides encoded by negative-polarity genes (negative gene proteins, NGP) with m. m. 5–30 × 10 3 kDa. Coronaviruses show marked differences from virus to virus in the number of negative genes detected. These negative-sense genes in the coronavirus genome allow this family to be considered as viruses developing an ambisense genome strategy.</description><identifier>ISSN: 1607-6729</identifier><identifier>EISSN: 1608-3091</identifier><identifier>DOI: 10.1134/S1607672921010130</identifier><identifier>PMID: 33689070</identifier><language>eng</language><publisher>Moscow: Pleiades Publishing</publisher><subject>Base Sequence ; Biochemistry ; Biochemistry &amp; Molecular Biology ; Biochemistry, Biophysics, and Molecular Biology ; Biological and Medical Physics ; Biomedical and Life Sciences ; Biophysics ; Coronaviridae ; Coronaviruses ; Genes, Viral - genetics ; Genomes ; Genomics ; Life Sciences ; Life Sciences &amp; Biomedicine ; Molecular Biology ; Open Reading Frames - genetics ; Polarity ; RNA, Viral - genetics ; SARS-CoV-2 - genetics ; Science &amp; Technology ; Viruses</subject><ispartof>Doklady. Biochemistry and biophysics, 2021-05, Vol.496 (1), p.27-31</ispartof><rights>Pleiades Publishing, Ltd. 2021. ISSN 1607-6729, Doklady Biochemistry and Biophysics, 2021, Vol. 496, pp. 27–31. © Pleiades Publishing, Ltd., 2021. Russian Text © The Author(s), 2021, published in Doklady Rossiiskoi Akademii Nauk. Nauki o Zhizni, 2021, Vol. 496, pp. 75–79.</rights><rights>Pleiades Publishing, Ltd. 2021, ISSN 1607-6729, Doklady Biochemistry and Biophysics, 2021, Vol. 496, pp. 27–31. © Pleiades Publishing, Ltd., 2021.Russian Text © The Author(s), 2021, published in Doklady Rossiiskoi Akademii Nauk. Nauki o Zhizni, 2021, Vol. 496, pp. 75–79.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>1</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000627383100007</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-c470t-9b9b2d91f4bf093c1eb31f0837267935066de29e81f682e3c8b2d1a6855031763</citedby><cites>FETCH-LOGICAL-c470t-9b9b2d91f4bf093c1eb31f0837267935066de29e81f682e3c8b2d1a6855031763</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1134/S1607672921010130$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1134/S1607672921010130$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>230,315,781,785,886,27929,27930,39263,41493,42562,51324</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33689070$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhirnov, O. P.</creatorcontrib><creatorcontrib>Poyarkov, S. V.</creatorcontrib><title>Novel Negative Sense Genes in the RNA Genome of Coronaviruses</title><title>Doklady. Biochemistry and biophysics</title><addtitle>Dokl Biochem Biophys</addtitle><addtitle>DOKL BIOCHEM BIOPHYS</addtitle><addtitle>Dokl Biochem Biophys</addtitle><description>The coronavirus family consists of lipid-containing envelope viruses that have a single-stranded RNA genome that encodes 25–30 proteins in different viruses by the mechanism of positive-polarity strategy. In addition, extended open reading trnslation frames (ORFs, genes) located in a negative-sense orientation were found in the genomes of coronaviruses. The size of negative-sense genes varies in the range of 150–450 nt, which corresponds to polypeptides encoded by negative-polarity genes (negative gene proteins, NGP) with m. m. 5–30 × 10 3 kDa. Coronaviruses show marked differences from virus to virus in the number of negative genes detected. These negative-sense genes in the coronavirus genome allow this family to be considered as viruses developing an ambisense genome strategy.</description><subject>Base Sequence</subject><subject>Biochemistry</subject><subject>Biochemistry &amp; Molecular Biology</subject><subject>Biochemistry, Biophysics, and Molecular Biology</subject><subject>Biological and Medical Physics</subject><subject>Biomedical and Life Sciences</subject><subject>Biophysics</subject><subject>Coronaviridae</subject><subject>Coronaviruses</subject><subject>Genes, Viral - genetics</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Life Sciences</subject><subject>Life Sciences &amp; Biomedicine</subject><subject>Molecular Biology</subject><subject>Open Reading Frames - genetics</subject><subject>Polarity</subject><subject>RNA, Viral - genetics</subject><subject>SARS-CoV-2 - genetics</subject><subject>Science &amp; Technology</subject><subject>Viruses</subject><issn>1607-6729</issn><issn>1608-3091</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>HGBXW</sourceid><sourceid>EIF</sourceid><recordid>eNqNkV2L1TAQhoMo7rr6A7yRgjeCVCeZNh8XLixFV2E5gqvXoe2Zns3Sk6xJe8R_b45dj18IkosMM887H7yMPebwgnOsXl5yCUoqYQSH_BDusOOc0iWC4Xe_x6rc14_Yg5SuAQQIrO-zI0SpDSg4Zq9WYUdjsaJNO7kdFZfkExXn5CkVzhfTFRUfVmf7RNhSEYaiCTH4dufinCg9ZPeGdkz06PY_YZ_evP7YvC0v3p-_a84uyr5SMJWmM51YGz5U3QAGe04d8gE0KiGVwRqkXJMwpPkgtSDsdcZ5K3VdA3Il8YSdLn1v5m5L6578FNvR3kS3beNXG1pnf694d2U3YWeVqapKYW7w7LZBDJ9nSpPdutTTOLaewpysqIwxyGu-n_X0D_Q6zNHn8xZKK8AqU3yh-hhSijQcluFg9-bYv8zJmie_XnFQ_HAjA3oBvlAXhtQ78j0dMACQQqFGniNQjZuyZcE3YfZTlj7_f2mmxUKnTPgNxZ83_nv9b_IttyQ</recordid><startdate>20210501</startdate><enddate>20210501</enddate><creator>Zhirnov, O. P.</creator><creator>Poyarkov, S. V.</creator><general>Pleiades Publishing</general><general>Springer Nature</general><general>Springer Nature B.V</general><scope>BLEPL</scope><scope>DTL</scope><scope>HGBXW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7QR</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20210501</creationdate><title>Novel Negative Sense Genes in the RNA Genome of Coronaviruses</title><author>Zhirnov, O. P. ; Poyarkov, S. V.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c470t-9b9b2d91f4bf093c1eb31f0837267935066de29e81f682e3c8b2d1a6855031763</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Base Sequence</topic><topic>Biochemistry</topic><topic>Biochemistry &amp; Molecular Biology</topic><topic>Biochemistry, Biophysics, and Molecular Biology</topic><topic>Biological and Medical Physics</topic><topic>Biomedical and Life Sciences</topic><topic>Biophysics</topic><topic>Coronaviridae</topic><topic>Coronaviruses</topic><topic>Genes, Viral - genetics</topic><topic>Genomes</topic><topic>Genomics</topic><topic>Life Sciences</topic><topic>Life Sciences &amp; Biomedicine</topic><topic>Molecular Biology</topic><topic>Open Reading Frames - genetics</topic><topic>Polarity</topic><topic>RNA, Viral - genetics</topic><topic>SARS-CoV-2 - genetics</topic><topic>Science &amp; Technology</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhirnov, O. P.</creatorcontrib><creatorcontrib>Poyarkov, S. V.</creatorcontrib><collection>Web of Science Core Collection</collection><collection>Science Citation Index Expanded</collection><collection>Web of Science - Science Citation Index Expanded - 2021</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium &amp; Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Immunology Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health &amp; Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Doklady. Biochemistry and biophysics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhirnov, O. P.</au><au>Poyarkov, S. V.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Novel Negative Sense Genes in the RNA Genome of Coronaviruses</atitle><jtitle>Doklady. Biochemistry and biophysics</jtitle><stitle>Dokl Biochem Biophys</stitle><stitle>DOKL BIOCHEM BIOPHYS</stitle><addtitle>Dokl Biochem Biophys</addtitle><date>2021-05-01</date><risdate>2021</risdate><volume>496</volume><issue>1</issue><spage>27</spage><epage>31</epage><pages>27-31</pages><issn>1607-6729</issn><eissn>1608-3091</eissn><abstract>The coronavirus family consists of lipid-containing envelope viruses that have a single-stranded RNA genome that encodes 25–30 proteins in different viruses by the mechanism of positive-polarity strategy. In addition, extended open reading trnslation frames (ORFs, genes) located in a negative-sense orientation were found in the genomes of coronaviruses. The size of negative-sense genes varies in the range of 150–450 nt, which corresponds to polypeptides encoded by negative-polarity genes (negative gene proteins, NGP) with m. m. 5–30 × 10 3 kDa. Coronaviruses show marked differences from virus to virus in the number of negative genes detected. These negative-sense genes in the coronavirus genome allow this family to be considered as viruses developing an ambisense genome strategy.</abstract><cop>Moscow</cop><pub>Pleiades Publishing</pub><pmid>33689070</pmid><doi>10.1134/S1607672921010130</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1607-6729
ispartof Doklady. Biochemistry and biophysics, 2021-05, Vol.496 (1), p.27-31
issn 1607-6729
1608-3091
language eng
recordid cdi_pubmed_primary_33689070
source MEDLINE; SpringerNature Journals; Web of Science - Science Citation Index Expanded - 2021<img src="https://exlibris-pub.s3.amazonaws.com/fromwos-v2.jpg" />
subjects Base Sequence
Biochemistry
Biochemistry & Molecular Biology
Biochemistry, Biophysics, and Molecular Biology
Biological and Medical Physics
Biomedical and Life Sciences
Biophysics
Coronaviridae
Coronaviruses
Genes, Viral - genetics
Genomes
Genomics
Life Sciences
Life Sciences & Biomedicine
Molecular Biology
Open Reading Frames - genetics
Polarity
RNA, Viral - genetics
SARS-CoV-2 - genetics
Science & Technology
Viruses
title Novel Negative Sense Genes in the RNA Genome of Coronaviruses
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-12T15%3A07%3A39IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Novel%20Negative%20Sense%20Genes%20in%20the%20RNA%20Genome%20of%20Coronaviruses&rft.jtitle=Doklady.%20Biochemistry%20and%20biophysics&rft.au=Zhirnov,%20O.%20P.&rft.date=2021-05-01&rft.volume=496&rft.issue=1&rft.spage=27&rft.epage=31&rft.pages=27-31&rft.issn=1607-6729&rft.eissn=1608-3091&rft_id=info:doi/10.1134/S1607672921010130&rft_dat=%3Cproquest_pubme%3E2499931516%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2499987034&rft_id=info:pmid/33689070&rfr_iscdi=true