The complete chloroplast genome sequence of Corylopsis multiflora Hance var. nivea Chang
Corylopsis multiflora Hance var. nivea Chang is a variety of the species C. multiflora in the family Hamamelidaceae and is classed as critically endangered (CR) in the Red List of China Higher Plants. The complete chloroplast genome sequence of this taxon (as C. multiflora var. nivea in GeneBank, ac...
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| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2021-01, Vol.6 (1), p.271-273 |
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| description | Corylopsis multiflora Hance var. nivea Chang is a variety of the species C. multiflora in the family Hamamelidaceae and is classed as critically endangered (CR) in the Red List of China Higher Plants. The complete chloroplast genome sequence of this taxon (as C. multiflora var. nivea in GeneBank, accession number: MW043717) was reported in this study. The genome size is 158,993 bp in length, consisting of a pair of inverted repeat regions (IR, 26,213bp), large single copy (LSC, 87,895bp) and small single copy (SSC, 18,672bp). A total of 133 genes were annotated that included 87 protein coding genes (PCGs), 37 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs) and 1 pseudo gene. GC content were 38.01%. The Bayesian phylogeny tree showed that C. multiflora var. nivea formed a monophyletic branch with Corylopis coreana and Corylopsis spicata. |
| doi_str_mv | 10.1080/23802359.2020.1861565 |
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The complete chloroplast genome sequence of this taxon (as C. multiflora var. nivea in GeneBank, accession number: MW043717) was reported in this study. The genome size is 158,993 bp in length, consisting of a pair of inverted repeat regions (IR, 26,213bp), large single copy (LSC, 87,895bp) and small single copy (SSC, 18,672bp). A total of 133 genes were annotated that included 87 protein coding genes (PCGs), 37 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs) and 1 pseudo gene. GC content were 38.01%. The Bayesian phylogeny tree showed that C. multiflora var. nivea formed a monophyletic branch with Corylopis coreana and Corylopsis spicata.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2020.1861565</identifier><identifier>PMID: 33553642</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>Bayesian analysis ; C. multiflora var. nivea ; chloroplast genome ; Chloroplasts ; Endangered species ; Genomes ; Hamamelidaceae ; Inverted repeat ; Mitogenome Announcement ; Nucleotide sequence ; Phylogeny ; Phylogeny tree ; Transfer RNA</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2021-01, Vol.6 (1), p.271-273</ispartof><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2021</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.</rights><rights>2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This work is licensed under the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2021 The Author(s). 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The Bayesian phylogeny tree showed that C. multiflora var. nivea formed a monophyletic branch with Corylopis coreana and Corylopsis spicata.</description><subject>Bayesian analysis</subject><subject>C. multiflora var. nivea</subject><subject>chloroplast genome</subject><subject>Chloroplasts</subject><subject>Endangered species</subject><subject>Genomes</subject><subject>Hamamelidaceae</subject><subject>Inverted repeat</subject><subject>Mitogenome Announcement</subject><subject>Nucleotide sequence</subject><subject>Phylogeny</subject><subject>Phylogeny tree</subject><subject>Transfer RNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9UstqHDEQHEJMbBx_gsNALrnsRo_RYy4hYUligyEXG3wTvXrsatGMJtLMGv99NNm1sXPISU1XdUnqqqq6xGiJkUSfCZWIUNYuCSKlJTlmnL2pzub-YgbevqhPq4ucdwghzKkQrXhXnVLKGOUNOavub7e21rEbgh1LsQ0xxSFAHuuN7WNn62x_T7bXto6uXsX0GOKQfa67KYzeFTbUVzDDe0jLuvd7C_VqC_3mfXXiIGR7cTzPq7sf329XV4ubXz-vV99uFppxMi5atCaEI6YxW7cWkBCOgZYOGqMZMy1D3ElrcKNF03LRyNbo1mkJhmDTYqDn1fVB10TYqSH5DtKjiuDV30ZMGwVp9DpYxahx0mCsEXJN4_AaENZMOi4RCK110fpy0BqmdWeNtv2YILwSfY30fqs2ca-EZIhSXgQ-HQVSLGvLo-p81jYE6G2csiKNFA0tpszUj_9Qd3FKfVmVIgxLyRmVorDYgaVTzDlZ9_wYjNQcBfUUBTVHQR2jUOY-vPzJ89ST8YXw9UDwvYupg4eYglEjFH-TS8VRnxX9_x1_AG1xw1M</recordid><startdate>20210127</startdate><enddate>20210127</enddate><creator>Lv, Ting</creator><creator>Chen, Shuifei</creator><creator>Zhao, Rong</creator><creator>Wang, Ningjie</creator><creator>Fang, Yanming</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-0097-9621</orcidid><orcidid>https://orcid.org/0000-0003-2320-9539</orcidid></search><sort><creationdate>20210127</creationdate><title>The complete chloroplast genome sequence of Corylopsis multiflora Hance var. nivea Chang</title><author>Lv, Ting ; Chen, Shuifei ; Zhao, Rong ; Wang, Ningjie ; Fang, Yanming</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c562t-90b22605c15b9ea077f5ac8fa4dc55d9506f8ed14c74967489dc9fc8ad21d91a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Bayesian analysis</topic><topic>C. multiflora var. nivea</topic><topic>chloroplast genome</topic><topic>Chloroplasts</topic><topic>Endangered species</topic><topic>Genomes</topic><topic>Hamamelidaceae</topic><topic>Inverted repeat</topic><topic>Mitogenome Announcement</topic><topic>Nucleotide sequence</topic><topic>Phylogeny</topic><topic>Phylogeny tree</topic><topic>Transfer RNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lv, Ting</creatorcontrib><creatorcontrib>Chen, Shuifei</creatorcontrib><creatorcontrib>Zhao, Rong</creatorcontrib><creatorcontrib>Wang, Ningjie</creatorcontrib><creatorcontrib>Fang, Yanming</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. 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The complete chloroplast genome sequence of this taxon (as C. multiflora var. nivea in GeneBank, accession number: MW043717) was reported in this study. The genome size is 158,993 bp in length, consisting of a pair of inverted repeat regions (IR, 26,213bp), large single copy (LSC, 87,895bp) and small single copy (SSC, 18,672bp). A total of 133 genes were annotated that included 87 protein coding genes (PCGs), 37 transfer RNA (tRNAs), and 8 ribosome RNA (rRNAs) and 1 pseudo gene. GC content were 38.01%. The Bayesian phylogeny tree showed that C. multiflora var. nivea formed a monophyletic branch with Corylopis coreana and Corylopsis spicata.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>33553642</pmid><doi>10.1080/23802359.2020.1861565</doi><tpages>3</tpages><orcidid>https://orcid.org/0000-0002-0097-9621</orcidid><orcidid>https://orcid.org/0000-0003-2320-9539</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Bayesian analysis C. multiflora var. nivea chloroplast genome Chloroplasts Endangered species Genomes Hamamelidaceae Inverted repeat Mitogenome Announcement Nucleotide sequence Phylogeny Phylogeny tree Transfer RNA |
| title | The complete chloroplast genome sequence of Corylopsis multiflora Hance var. nivea Chang |
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