Molecular Etiology of Isolated Congenital Cataract Using Next-Generation Sequencing: Single Center Exome Sequencing Data from Turkey
Congenital cataract, which refers to lenticular opacity diagnosed at birth or more commonly during the first year of life, is one of the leading causes of childhood blindness. Molecular understanding of the disease pathogenesis has evolved thanks to many studies based on modern technologies. In this...
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Veröffentlicht in: | Molecular syndromology 2020-12, Vol.11 (5-6), p.302-308 |
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creator | Taylan Sekeroglu, Hande Karaosmanoglu, Beren Taskiran, Ekim Z. Simsek Kiper, Pelin O. Alikasifoglu, Mehmet Boduroglu, Koray Coskun, Turgay Utine, Gulen Eda |
description | Congenital cataract, which refers to lenticular opacity diagnosed at birth or more commonly during the first year of life, is one of the leading causes of childhood blindness. Molecular understanding of the disease pathogenesis has evolved thanks to many studies based on modern technologies. In this study, we aimed to identify and discuss the molecular etiology of nonsyndromic or nonmetabolic bilateral congenital cataract by whole-exome sequencing (WES). Patients with bilateral congenital cataract presumed to be isolated after metabolic and genetic evaluation were enrolled in the study. All patients underwent detailed ophthalmological examination and bilateral cataract surgery. DNA samples of the probands, parents, and available affected family members were analyzed by WES. Variants were validated and confirmed by Sanger sequencing in all probands and in available affected family members. A total of 4 patients (3 girls and 1 boy) were recruited. Two patients had nuclear, 1 patient had total, and 1 patient had combined lamellar and sutural cataract. One family had consanguinity. A heterozygous c.215+1G>A mutation in CRYBA1, heterozygous c.432C>G (p.Tyr144Ter) mutation in CRYGC, heterozygous c.70A>C (p.Pro24Thr) mutation in CRYGD, and a heterozygous c.466G>A (p.Gly156Arg) mutation in CRYBB3 were detected. All these mutations were confirmed by Sanger sequencing in selected affected individuals. The current study identified all causative mutations of congenital cataract in the crystalline genes. The results confirmed that WES is a very useful tool in the investigation of the diseases with heterogeneous genetic background. |
doi_str_mv | 10.1159/000510481 |
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Molecular understanding of the disease pathogenesis has evolved thanks to many studies based on modern technologies. In this study, we aimed to identify and discuss the molecular etiology of nonsyndromic or nonmetabolic bilateral congenital cataract by whole-exome sequencing (WES). Patients with bilateral congenital cataract presumed to be isolated after metabolic and genetic evaluation were enrolled in the study. All patients underwent detailed ophthalmological examination and bilateral cataract surgery. DNA samples of the probands, parents, and available affected family members were analyzed by WES. Variants were validated and confirmed by Sanger sequencing in all probands and in available affected family members. A total of 4 patients (3 girls and 1 boy) were recruited. Two patients had nuclear, 1 patient had total, and 1 patient had combined lamellar and sutural cataract. One family had consanguinity. A heterozygous c.215+1G>A mutation in CRYBA1, heterozygous c.432C>G (p.Tyr144Ter) mutation in CRYGC, heterozygous c.70A>C (p.Pro24Thr) mutation in CRYGD, and a heterozygous c.466G>A (p.Gly156Arg) mutation in CRYBB3 were detected. All these mutations were confirmed by Sanger sequencing in selected affected individuals. The current study identified all causative mutations of congenital cataract in the crystalline genes. The results confirmed that WES is a very useful tool in the investigation of the diseases with heterogeneous genetic background.</description><identifier>ISSN: 1661-8769</identifier><identifier>EISSN: 1661-8777</identifier><identifier>DOI: 10.1159/000510481</identifier><identifier>PMID: 33510601</identifier><language>eng</language><publisher>Basel, Switzerland: S. Karger AG</publisher><subject>Original ; Original Article</subject><ispartof>Molecular syndromology, 2020-12, Vol.11 (5-6), p.302-308</ispartof><rights>2020 S. Karger AG, Basel</rights><rights>Copyright © 2020 by S. Karger AG, Basel.</rights><rights>Copyright © 2020 by S. Karger AG, Basel 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c424t-5bded2242afcff955a67ddd8ebf21c65e6ee91b7940abf7cb06f2eed1b779ace3</citedby><cites>FETCH-LOGICAL-c424t-5bded2242afcff955a67ddd8ebf21c65e6ee91b7940abf7cb06f2eed1b779ace3</cites><orcidid>0000-0001-7244-7766</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7802443/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7802443/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,724,777,781,882,2424,27906,27907,53773,53775</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33510601$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Taylan Sekeroglu, Hande</creatorcontrib><creatorcontrib>Karaosmanoglu, Beren</creatorcontrib><creatorcontrib>Taskiran, Ekim Z.</creatorcontrib><creatorcontrib>Simsek Kiper, Pelin O.</creatorcontrib><creatorcontrib>Alikasifoglu, Mehmet</creatorcontrib><creatorcontrib>Boduroglu, Koray</creatorcontrib><creatorcontrib>Coskun, Turgay</creatorcontrib><creatorcontrib>Utine, Gulen Eda</creatorcontrib><title>Molecular Etiology of Isolated Congenital Cataract Using Next-Generation Sequencing: Single Center Exome Sequencing Data from Turkey</title><title>Molecular syndromology</title><addtitle>Mol Syndromol</addtitle><description>Congenital cataract, which refers to lenticular opacity diagnosed at birth or more commonly during the first year of life, is one of the leading causes of childhood blindness. Molecular understanding of the disease pathogenesis has evolved thanks to many studies based on modern technologies. In this study, we aimed to identify and discuss the molecular etiology of nonsyndromic or nonmetabolic bilateral congenital cataract by whole-exome sequencing (WES). Patients with bilateral congenital cataract presumed to be isolated after metabolic and genetic evaluation were enrolled in the study. All patients underwent detailed ophthalmological examination and bilateral cataract surgery. DNA samples of the probands, parents, and available affected family members were analyzed by WES. Variants were validated and confirmed by Sanger sequencing in all probands and in available affected family members. A total of 4 patients (3 girls and 1 boy) were recruited. Two patients had nuclear, 1 patient had total, and 1 patient had combined lamellar and sutural cataract. One family had consanguinity. A heterozygous c.215+1G>A mutation in CRYBA1, heterozygous c.432C>G (p.Tyr144Ter) mutation in CRYGC, heterozygous c.70A>C (p.Pro24Thr) mutation in CRYGD, and a heterozygous c.466G>A (p.Gly156Arg) mutation in CRYBB3 were detected. All these mutations were confirmed by Sanger sequencing in selected affected individuals. The current study identified all causative mutations of congenital cataract in the crystalline genes. The results confirmed that WES is a very useful tool in the investigation of the diseases with heterogeneous genetic background.</description><subject>Original</subject><subject>Original Article</subject><issn>1661-8769</issn><issn>1661-8777</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNptkU1vFSEYhYnR2KZ24d4YEjd2MQrMBzMuTMxYa5NWF7dduCIMvIxjGbgCY3r3_eFibp3UxA0QznMOLzkIPafkDaV195YQUlNStfQROqRNQ4uWc_54PTfdATqO8UfGSNmxltKn6KAss6Uh9BDdXXoLarEy4NM0eevHHfYGn0dvZQKNe-9GcFOSFvcyySBVwtdxciP-ArepOAMHQWajwxv4uYBTWXqHN3m1gHtwCXLwrZ_hgY4_5iRsgp_x1RJuYPcMPTHSRji-34_Q9afTq_5zcfH17Lz_cFGoilWpqAcNmrGKSaOM6epaNlxr3cJgGFVNDQ1ARwfeVUQOhquBNIYB6HzFO6mgPELv97nbZZhBqzxekFZswzTLsBNeTuJfxU3fxeh_Cd4SVlVlDnh9HxB8_k1MYp6iAmulA79Ewaq2bCkjvMvoyR5VwccYwKzPUCL-FCfW4jL78uFcK_m3pgy82AM3MowQVmD1v_qvfLn5tifEVpvyN8PQrAc</recordid><startdate>20201201</startdate><enddate>20201201</enddate><creator>Taylan Sekeroglu, Hande</creator><creator>Karaosmanoglu, Beren</creator><creator>Taskiran, Ekim Z.</creator><creator>Simsek Kiper, Pelin O.</creator><creator>Alikasifoglu, Mehmet</creator><creator>Boduroglu, Koray</creator><creator>Coskun, Turgay</creator><creator>Utine, Gulen Eda</creator><general>S. Karger AG</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0001-7244-7766</orcidid></search><sort><creationdate>20201201</creationdate><title>Molecular Etiology of Isolated Congenital Cataract Using Next-Generation Sequencing: Single Center Exome Sequencing Data from Turkey</title><author>Taylan Sekeroglu, Hande ; Karaosmanoglu, Beren ; Taskiran, Ekim Z. ; Simsek Kiper, Pelin O. ; Alikasifoglu, Mehmet ; Boduroglu, Koray ; Coskun, Turgay ; Utine, Gulen Eda</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c424t-5bded2242afcff955a67ddd8ebf21c65e6ee91b7940abf7cb06f2eed1b779ace3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Original</topic><topic>Original Article</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Taylan Sekeroglu, Hande</creatorcontrib><creatorcontrib>Karaosmanoglu, Beren</creatorcontrib><creatorcontrib>Taskiran, Ekim Z.</creatorcontrib><creatorcontrib>Simsek Kiper, Pelin O.</creatorcontrib><creatorcontrib>Alikasifoglu, Mehmet</creatorcontrib><creatorcontrib>Boduroglu, Koray</creatorcontrib><creatorcontrib>Coskun, Turgay</creatorcontrib><creatorcontrib>Utine, Gulen Eda</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular syndromology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Taylan Sekeroglu, Hande</au><au>Karaosmanoglu, Beren</au><au>Taskiran, Ekim Z.</au><au>Simsek Kiper, Pelin O.</au><au>Alikasifoglu, Mehmet</au><au>Boduroglu, Koray</au><au>Coskun, Turgay</au><au>Utine, Gulen Eda</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular Etiology of Isolated Congenital Cataract Using Next-Generation Sequencing: Single Center Exome Sequencing Data from Turkey</atitle><jtitle>Molecular syndromology</jtitle><addtitle>Mol Syndromol</addtitle><date>2020-12-01</date><risdate>2020</risdate><volume>11</volume><issue>5-6</issue><spage>302</spage><epage>308</epage><pages>302-308</pages><issn>1661-8769</issn><eissn>1661-8777</eissn><abstract>Congenital cataract, which refers to lenticular opacity diagnosed at birth or more commonly during the first year of life, is one of the leading causes of childhood blindness. Molecular understanding of the disease pathogenesis has evolved thanks to many studies based on modern technologies. In this study, we aimed to identify and discuss the molecular etiology of nonsyndromic or nonmetabolic bilateral congenital cataract by whole-exome sequencing (WES). Patients with bilateral congenital cataract presumed to be isolated after metabolic and genetic evaluation were enrolled in the study. All patients underwent detailed ophthalmological examination and bilateral cataract surgery. DNA samples of the probands, parents, and available affected family members were analyzed by WES. Variants were validated and confirmed by Sanger sequencing in all probands and in available affected family members. A total of 4 patients (3 girls and 1 boy) were recruited. Two patients had nuclear, 1 patient had total, and 1 patient had combined lamellar and sutural cataract. One family had consanguinity. A heterozygous c.215+1G>A mutation in CRYBA1, heterozygous c.432C>G (p.Tyr144Ter) mutation in CRYGC, heterozygous c.70A>C (p.Pro24Thr) mutation in CRYGD, and a heterozygous c.466G>A (p.Gly156Arg) mutation in CRYBB3 were detected. All these mutations were confirmed by Sanger sequencing in selected affected individuals. The current study identified all causative mutations of congenital cataract in the crystalline genes. The results confirmed that WES is a very useful tool in the investigation of the diseases with heterogeneous genetic background.</abstract><cop>Basel, Switzerland</cop><pub>S. Karger AG</pub><pmid>33510601</pmid><doi>10.1159/000510481</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0001-7244-7766</orcidid><oa>free_for_read</oa></addata></record> |
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title | Molecular Etiology of Isolated Congenital Cataract Using Next-Generation Sequencing: Single Center Exome Sequencing Data from Turkey |
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