Alkalicaulis satelles gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium Geitlerinema species and proposals of Maricaulaceae fam. nov., Robiginitomaculaceae fam. nov., Maricaulales ord. nov. and Hyphomonadales ord. nov
A prosthecate bacterial strain, designated G-192T, was isolated from decaying biomass of a haloalkaliphilic cyanobacterium Geitlerinema sp. Z- T0701. The cells were aerobic, Gram- negative, non- endospore- forming and dimorphic, occurring either as sessile bacteria with a characteristic stalk or as...
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| creator | Kevbrin, Vadim Boltyanskaya, Yulia Koziaeva, Veronika Uzun, Maria Grouzdev, Denis |
| description | A prosthecate bacterial strain, designated G-192T, was isolated from decaying biomass of a haloalkaliphilic cyanobacterium Geitlerinema sp. Z- T0701. The cells were aerobic, Gram- negative, non- endospore- forming and dimorphic, occurring either as sessile bacteria with a characteristic stalk or as motile flagellated cells. The strain utilized a limited range of substrates, mostly peptonaceous, but was able to degrade whole proteins. Growth occurred at 5?46 ?C (optimum, 35?40 ?C), pH 7.3?10.3 (optimum, pH 8.0?9.0), 0?14 % NaCl (v/w; optimum, 2.0?6.0 %, v/w). The G+C content of the genomic DNA of strain G-192T was 66.8%. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain G-192T formed a distinct evolutionary lineage within the family Hyphomonadaceae. Strain G-192T showed the highest 16S rRNA sequence similarity to Glycocaulis profundi ZYF765T (95.2%), Oceanicaulis stylophorae GISW-4T (94.2%) and Marinicauda salina WD6-1T (95.5%). The major cellular fatty acids (>5% of the total) were C18:1?9c, C18:0 and 11-methyl-C18:1 ?7c. The major polar lipids were glycolipids and phospholipids. The only respiratory quinone was ubiquinone-10 (Q-10). Based on polyphasic results including phylogenomic data, the novel strain could be distinguished from other genera, which suggests that strain G-192T represents a novel species of a new genus, for which the name Alkalicaulis satelles gen. nov., sp. nov. is proposed. The type strain is G-192T (=VKM B-3306T=KCTC 72746T). The strain is the first representative of the stalked bacteria associated with a haloalkaliphilic cyanobacterium. Based on phylogenomic indices and phenotypic data, it is proposed to evolve two novel families Maricaulaceae fam. nov. and Robiginitomaculaceae fam. nov. out of the current family Hyphomonadaceae. In addition, it is proposed to place the first two families in the novel order Maricaulales ord. nov. and novel order Hyphomonadales ord. nov. is proposed to accommodate the family Hyphomonadaceae. |
| doi_str_mv | 10.1099/ijsem.0.004614 |
| format | Article |
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Z- T0701. The cells were aerobic, Gram- negative, non- endospore- forming and dimorphic, occurring either as sessile bacteria with a characteristic stalk or as motile flagellated cells. The strain utilized a limited range of substrates, mostly peptonaceous, but was able to degrade whole proteins. Growth occurred at 5?46 ?C (optimum, 35?40 ?C), pH 7.3?10.3 (optimum, pH 8.0?9.0), 0?14 % NaCl (v/w; optimum, 2.0?6.0 %, v/w). The G+C content of the genomic DNA of strain G-192T was 66.8%. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain G-192T formed a distinct evolutionary lineage within the family Hyphomonadaceae. Strain G-192T showed the highest 16S rRNA sequence similarity to Glycocaulis profundi ZYF765T (95.2%), Oceanicaulis stylophorae GISW-4T (94.2%) and Marinicauda salina WD6-1T (95.5%). The major cellular fatty acids (>5% of the total) were C18:1?9c, C18:0 and 11-methyl-C18:1 ?7c. The major polar lipids were glycolipids and phospholipids. The only respiratory quinone was ubiquinone-10 (Q-10). Based on polyphasic results including phylogenomic data, the novel strain could be distinguished from other genera, which suggests that strain G-192T represents a novel species of a new genus, for which the name Alkalicaulis satelles gen. nov., sp. nov. is proposed. The type strain is G-192T (=VKM B-3306T=KCTC 72746T). The strain is the first representative of the stalked bacteria associated with a haloalkaliphilic cyanobacterium. Based on phylogenomic indices and phenotypic data, it is proposed to evolve two novel families Maricaulaceae fam. nov. and Robiginitomaculaceae fam. nov. out of the current family Hyphomonadaceae. In addition, it is proposed to place the first two families in the novel order Maricaulales ord. nov. and novel order Hyphomonadales ord. nov. is proposed to accommodate the family Hyphomonadaceae.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.004614</identifier><identifier>PMID: 33351741</identifier><language>eng</language><publisher>LONDON: Microbiology Soc</publisher><subject>Alphaproteobacteria - classification ; Alphaproteobacteria - isolation & purification ; Bacterial Typing Techniques ; Base Composition ; Cyanobacteria ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Glycolipids - chemistry ; Laboratories ; Life Sciences & Biomedicine ; Microbiology ; Phospholipids - chemistry ; Phylogeny ; RNA, Ribosomal, 16S - genetics ; Science & Technology ; Sequence Analysis, DNA ; Ubiquinone - analogs & derivatives ; Ubiquinone - chemistry</subject><ispartof>International journal of systematic and evolutionary microbiology, 2021-01, Vol.71 (1), Article 004614</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>8</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000636433500027</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-c335t-31e4f6a1f7632296f557e7176b25963862c29e23c0b1468d281328e016cdb8e23</citedby><cites>FETCH-LOGICAL-c335t-31e4f6a1f7632296f557e7176b25963862c29e23c0b1468d281328e016cdb8e23</cites><orcidid>0000-0002-1358-5146 ; 0000-0002-3802-6906 ; 0000-0001-9046-2361 ; 0000-0001-5299-6880</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,782,786,3748,27931,27932,39265</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33351741$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kevbrin, Vadim</creatorcontrib><creatorcontrib>Boltyanskaya, Yulia</creatorcontrib><creatorcontrib>Koziaeva, Veronika</creatorcontrib><creatorcontrib>Uzun, Maria</creatorcontrib><creatorcontrib>Grouzdev, Denis</creatorcontrib><title>Alkalicaulis satelles gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium Geitlerinema species and proposals of Maricaulaceae fam. nov., Robiginitomaculaceae fam. nov., Maricaulales ord. nov. and Hyphomonadales ord. nov</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>INT J SYST EVOL MICR</addtitle><addtitle>Int J Syst Evol Microbiol</addtitle><description>A prosthecate bacterial strain, designated G-192T, was isolated from decaying biomass of a haloalkaliphilic cyanobacterium Geitlerinema sp. Z- T0701. The cells were aerobic, Gram- negative, non- endospore- forming and dimorphic, occurring either as sessile bacteria with a characteristic stalk or as motile flagellated cells. The strain utilized a limited range of substrates, mostly peptonaceous, but was able to degrade whole proteins. Growth occurred at 5?46 ?C (optimum, 35?40 ?C), pH 7.3?10.3 (optimum, pH 8.0?9.0), 0?14 % NaCl (v/w; optimum, 2.0?6.0 %, v/w). The G+C content of the genomic DNA of strain G-192T was 66.8%. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain G-192T formed a distinct evolutionary lineage within the family Hyphomonadaceae. Strain G-192T showed the highest 16S rRNA sequence similarity to Glycocaulis profundi ZYF765T (95.2%), Oceanicaulis stylophorae GISW-4T (94.2%) and Marinicauda salina WD6-1T (95.5%). The major cellular fatty acids (>5% of the total) were C18:1?9c, C18:0 and 11-methyl-C18:1 ?7c. The major polar lipids were glycolipids and phospholipids. The only respiratory quinone was ubiquinone-10 (Q-10). Based on polyphasic results including phylogenomic data, the novel strain could be distinguished from other genera, which suggests that strain G-192T represents a novel species of a new genus, for which the name Alkalicaulis satelles gen. nov., sp. nov. is proposed. The type strain is G-192T (=VKM B-3306T=KCTC 72746T). The strain is the first representative of the stalked bacteria associated with a haloalkaliphilic cyanobacterium. Based on phylogenomic indices and phenotypic data, it is proposed to evolve two novel families Maricaulaceae fam. nov. and Robiginitomaculaceae fam. nov. out of the current family Hyphomonadaceae. In addition, it is proposed to place the first two families in the novel order Maricaulales ord. nov. and novel order Hyphomonadales ord. nov. is proposed to accommodate the family Hyphomonadaceae.</description><subject>Alphaproteobacteria - classification</subject><subject>Alphaproteobacteria - isolation & purification</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>Cyanobacteria</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Glycolipids - chemistry</subject><subject>Laboratories</subject><subject>Life Sciences & Biomedicine</subject><subject>Microbiology</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Science & Technology</subject><subject>Sequence Analysis, DNA</subject><subject>Ubiquinone - analogs & derivatives</subject><subject>Ubiquinone - chemistry</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>HGBXW</sourceid><sourceid>EIF</sourceid><recordid>eNqNkctv1DAQhwPi0VK4ckQ-IsEGPxInOVYraJGKkBCco4kz6br4EWynaP97vLvdlZA4cJrRzDfzm0dRvGa0ZLTrPui7iLakJaWVZNXj4pxVUq5qKqonJ5_Ls-JFjHeU5gClz4szIUTNmoqdP3p2aX6C0QoWoyOJkNAYjOQWXUmcvy_fkzgfPdhZNGQDxsO-bN5og0RHb3LhSKbgbaYMDD5A8mFL1GLSEpCoLTg_gEoY9GLJFepksuvQQhZApbMmuJHMwc8-gonET-QLhP1goBCQTGCPg3zzg77VTidvQf0jfyrcreLDeIjvBa6388Zb72D8K_myeDplVXz1YC-KH58-fl9fr26-Xn1eX96sVL5YWgmG1SSBTY0UnHdyqusGG9bIgdedFK3kinfIhaJDPnU78pYJ3iJlUo1DmxMXxdtD37zorwVj6q2OKt8cHPol9rxqREVF0-zQ8oCq4GMMOPVz0BbCtme03_2-3_--p_3h97ngzUPvZbA4nvDjszPw7gD8xsFPMR_dKTxhlFIpZJXh7PEm0-3_02udIGnv1n5xSfwBaa3PJQ</recordid><startdate>20210101</startdate><enddate>20210101</enddate><creator>Kevbrin, Vadim</creator><creator>Boltyanskaya, Yulia</creator><creator>Koziaeva, Veronika</creator><creator>Uzun, Maria</creator><creator>Grouzdev, Denis</creator><general>Microbiology Soc</general><scope>BLEPL</scope><scope>DTL</scope><scope>HGBXW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-1358-5146</orcidid><orcidid>https://orcid.org/0000-0002-3802-6906</orcidid><orcidid>https://orcid.org/0000-0001-9046-2361</orcidid><orcidid>https://orcid.org/0000-0001-5299-6880</orcidid></search><sort><creationdate>20210101</creationdate><title>Alkalicaulis satelles gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium Geitlerinema species and proposals of Maricaulaceae fam. nov., Robiginitomaculaceae fam. nov., Maricaulales ord. nov. and Hyphomonadales ord. nov</title><author>Kevbrin, Vadim ; 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Z- T0701. The cells were aerobic, Gram- negative, non- endospore- forming and dimorphic, occurring either as sessile bacteria with a characteristic stalk or as motile flagellated cells. The strain utilized a limited range of substrates, mostly peptonaceous, but was able to degrade whole proteins. Growth occurred at 5?46 ?C (optimum, 35?40 ?C), pH 7.3?10.3 (optimum, pH 8.0?9.0), 0?14 % NaCl (v/w; optimum, 2.0?6.0 %, v/w). The G+C content of the genomic DNA of strain G-192T was 66.8%. Phylogenetic analysis of the 16S rRNA gene sequence revealed that strain G-192T formed a distinct evolutionary lineage within the family Hyphomonadaceae. Strain G-192T showed the highest 16S rRNA sequence similarity to Glycocaulis profundi ZYF765T (95.2%), Oceanicaulis stylophorae GISW-4T (94.2%) and Marinicauda salina WD6-1T (95.5%). The major cellular fatty acids (>5% of the total) were C18:1?9c, C18:0 and 11-methyl-C18:1 ?7c. The major polar lipids were glycolipids and phospholipids. The only respiratory quinone was ubiquinone-10 (Q-10). Based on polyphasic results including phylogenomic data, the novel strain could be distinguished from other genera, which suggests that strain G-192T represents a novel species of a new genus, for which the name Alkalicaulis satelles gen. nov., sp. nov. is proposed. The type strain is G-192T (=VKM B-3306T=KCTC 72746T). The strain is the first representative of the stalked bacteria associated with a haloalkaliphilic cyanobacterium. Based on phylogenomic indices and phenotypic data, it is proposed to evolve two novel families Maricaulaceae fam. nov. and Robiginitomaculaceae fam. nov. out of the current family Hyphomonadaceae. In addition, it is proposed to place the first two families in the novel order Maricaulales ord. nov. and novel order Hyphomonadales ord. nov. is proposed to accommodate the family Hyphomonadaceae.</abstract><cop>LONDON</cop><pub>Microbiology Soc</pub><pmid>33351741</pmid><doi>10.1099/ijsem.0.004614</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0002-1358-5146</orcidid><orcidid>https://orcid.org/0000-0002-3802-6906</orcidid><orcidid>https://orcid.org/0000-0001-9046-2361</orcidid><orcidid>https://orcid.org/0000-0001-5299-6880</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Alphaproteobacteria - classification Alphaproteobacteria - isolation & purification Bacterial Typing Techniques Base Composition Cyanobacteria DNA, Bacterial - genetics Fatty Acids - chemistry Glycolipids - chemistry Laboratories Life Sciences & Biomedicine Microbiology Phospholipids - chemistry Phylogeny RNA, Ribosomal, 16S - genetics Science & Technology Sequence Analysis, DNA Ubiquinone - analogs & derivatives Ubiquinone - chemistry |
| title | Alkalicaulis satelles gen. nov., sp. nov., a novel haloalkaliphile isolated from a laboratory culture cyanobacterium Geitlerinema species and proposals of Maricaulaceae fam. nov., Robiginitomaculaceae fam. nov., Maricaulales ord. nov. and Hyphomonadales ord. nov |
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