The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis

Mediator 12 (MED12) and MED13 are components of the Mediator multi-protein complex, that facilitates the initial steps of gene transcription. Here, in an Arabidopsis mutant screen, we identify MED12 and MED13 as positive gene regulators, both of which contribute broadly to morc1 de-repressed gene ex...

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Veröffentlicht in:Nature communications 2020-06, Vol.11 (1), p.2798-2798, Article 2798
Hauptverfasser: Liu, Qikun, Bischof, Sylvain, Harris, C. Jake, Zhong, Zhenhui, Zhan, Lingyu, Nguyen, Calvin, Rashoff, Andrew, Barshop, William D., Sun, Fei, Feng, Suhua, Potok, Magdalena, Gallego-Bartolome, Javier, Zhai, Jixian, Wohlschlegel, James A., Carey, Michael F., Long, Jeffrey A., Jacobsen, Steven E.
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container_title Nature communications
container_volume 11
creator Liu, Qikun
Bischof, Sylvain
Harris, C. Jake
Zhong, Zhenhui
Zhan, Lingyu
Nguyen, Calvin
Rashoff, Andrew
Barshop, William D.
Sun, Fei
Feng, Suhua
Potok, Magdalena
Gallego-Bartolome, Javier
Zhai, Jixian
Wohlschlegel, James A.
Carey, Michael F.
Long, Jeffrey A.
Jacobsen, Steven E.
description Mediator 12 (MED12) and MED13 are components of the Mediator multi-protein complex, that facilitates the initial steps of gene transcription. Here, in an Arabidopsis mutant screen, we identify MED12 and MED13 as positive gene regulators, both of which contribute broadly to morc1 de-repressed gene expression. Both MED12 and MED13 are preferentially required for the expression of genes depleted in active chromatin marks, a chromatin signature shared with morc1 re-activated loci. We further discover that MED12 tends to interact with genes that are responsive to environmental stimuli, including light and radiation. We demonstrate that light-induced transient gene expression depends on MED12, and is accompanied by a concomitant increase in MED12 enrichment during induction. In contrast, the steady-state expression level of these genes show little dependence on MED12, suggesting that MED12 is primarily required to aid the expression of genes in transition from less-active to more active states. Mediator is a multiprotein complex required to activate gene transcription by RNAPII. Here, the authors report that MED12 and MED13 are conditional positive regulators that facilitate the expression of genes depleted in active chromatin marks and the induction of gene expression in response to environmental stimuli in Arabidopsis.
doi_str_mv 10.1038/s41467-020-16651-5
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Both MED12 and MED13 are preferentially required for the expression of genes depleted in active chromatin marks, a chromatin signature shared with morc1 re-activated loci. We further discover that MED12 tends to interact with genes that are responsive to environmental stimuli, including light and radiation. We demonstrate that light-induced transient gene expression depends on MED12, and is accompanied by a concomitant increase in MED12 enrichment during induction. In contrast, the steady-state expression level of these genes show little dependence on MED12, suggesting that MED12 is primarily required to aid the expression of genes in transition from less-active to more active states. Mediator is a multiprotein complex required to activate gene transcription by RNAPII. 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Jake</creatorcontrib><creatorcontrib>Zhong, Zhenhui</creatorcontrib><creatorcontrib>Zhan, Lingyu</creatorcontrib><creatorcontrib>Nguyen, Calvin</creatorcontrib><creatorcontrib>Rashoff, Andrew</creatorcontrib><creatorcontrib>Barshop, William D.</creatorcontrib><creatorcontrib>Sun, Fei</creatorcontrib><creatorcontrib>Feng, Suhua</creatorcontrib><creatorcontrib>Potok, Magdalena</creatorcontrib><creatorcontrib>Gallego-Bartolome, Javier</creatorcontrib><creatorcontrib>Zhai, Jixian</creatorcontrib><creatorcontrib>Wohlschlegel, James A.</creatorcontrib><creatorcontrib>Carey, Michael F.</creatorcontrib><creatorcontrib>Long, Jeffrey A.</creatorcontrib><creatorcontrib>Jacobsen, Steven E.</creatorcontrib><title>The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis</title><title>Nature communications</title><addtitle>Nat Commun</addtitle><addtitle>Nat Commun</addtitle><description>Mediator 12 (MED12) and MED13 are components of the Mediator multi-protein complex, that facilitates the initial steps of gene transcription. 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subjects 38
38/15
45
45/23
45/91
631/208/176/2016
631/337/100/102
631/449/1659
Arabidopsis
Arabidopsis - genetics
Arabidopsis - radiation effects
Arabidopsis Proteins - genetics
Arabidopsis Proteins - metabolism
Chromatin
Chromatin - metabolism
Depletion
DNA Methylation - genetics
DNA Methylation - radiation effects
Environmental effects
Epigenesis, Genetic - radiation effects
Gene expression
Gene Expression Regulation, Plant - radiation effects
Genes
Genes, Plant
Genes, Suppressor
Genetic Loci
Green Fluorescent Proteins - metabolism
Humanities and Social Sciences
Light
Light effects
multidisciplinary
Plants, Genetically Modified
Radiation
Regulators
Repressor Proteins - genetics
Repressor Proteins - metabolism
Science
Science (multidisciplinary)
Stimuli
Transcription
Up-Regulation - genetics
Up-Regulation - radiation effects
title The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis
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