A high-resolution description of β 1 -adrenergic receptor functional dynamics and allosteric coupling from backbone NMR
Signal transmission and regulation of G-protein-coupled receptors (GPCRs) by extra- and intracellular ligands occurs via modulation of complex conformational equilibria, but their exact kinetic details and underlying atomic mechanisms are unknown. Here we quantified these dynamic equilibria in the β...
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Veröffentlicht in: | Nature communications 2020-05, Vol.11 (1), p.2216 |
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description | Signal transmission and regulation of G-protein-coupled receptors (GPCRs) by extra- and intracellular ligands occurs via modulation of complex conformational equilibria, but their exact kinetic details and underlying atomic mechanisms are unknown. Here we quantified these dynamic equilibria in the β
-adrenergic receptor in its apo form and seven ligand complexes using
H/
N NMR spectroscopy. We observe three major exchanging conformations: an inactive conformation (C
), a preactive conformation (C
) and an active conformation (C
), which becomes fully populated in a ternary complex with a G protein mimicking nanobody. The C
↔ C
exchange occurs on the microsecond scale, the C
↔ C
exchange is slower than ~5 ms and only occurs in the presence of two highly conserved tyrosines (Y
, Y
), which stabilize the active conformation of TM6. The C
→C
chemical shift changes indicate a pivoting motion of the entire TM6 that couples the effector site to the orthosteric ligand pocket. |
format | Article |
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-adrenergic receptor in its apo form and seven ligand complexes using
H/
N NMR spectroscopy. We observe three major exchanging conformations: an inactive conformation (C
), a preactive conformation (C
) and an active conformation (C
), which becomes fully populated in a ternary complex with a G protein mimicking nanobody. The C
↔ C
exchange occurs on the microsecond scale, the C
↔ C
exchange is slower than ~5 ms and only occurs in the presence of two highly conserved tyrosines (Y
, Y
), which stabilize the active conformation of TM6. The C
→C
chemical shift changes indicate a pivoting motion of the entire TM6 that couples the effector site to the orthosteric ligand pocket.</description><identifier>EISSN: 2041-1723</identifier><identifier>PMID: 32371991</identifier><language>eng</language><publisher>England</publisher><subject>Algorithms ; Allosteric Regulation ; Animals ; Humans ; Ligands ; Magnetic Resonance Spectroscopy - methods ; Models, Molecular ; Models, Theoretical ; Protein Binding ; Protein Conformation ; Receptors, Adrenergic, beta-1 - chemistry ; Receptors, Adrenergic, beta-1 - genetics ; Receptors, Adrenergic, beta-1 - metabolism ; Receptors, G-Protein-Coupled - chemistry ; Receptors, G-Protein-Coupled - genetics ; Receptors, G-Protein-Coupled - metabolism ; Sf9 Cells ; Spodoptera</subject><ispartof>Nature communications, 2020-05, Vol.11 (1), p.2216</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><orcidid>0000-0003-1998-4225 ; 0000-0003-3537-534X ; 0000-0002-3768-6427 ; 0000-0002-4980-1330</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32371991$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Grahl, Anne</creatorcontrib><creatorcontrib>Abiko, Layara Akemi</creatorcontrib><creatorcontrib>Isogai, Shin</creatorcontrib><creatorcontrib>Sharpe, Timothy</creatorcontrib><creatorcontrib>Grzesiek, Stephan</creatorcontrib><title>A high-resolution description of β 1 -adrenergic receptor functional dynamics and allosteric coupling from backbone NMR</title><title>Nature communications</title><addtitle>Nat Commun</addtitle><description>Signal transmission and regulation of G-protein-coupled receptors (GPCRs) by extra- and intracellular ligands occurs via modulation of complex conformational equilibria, but their exact kinetic details and underlying atomic mechanisms are unknown. Here we quantified these dynamic equilibria in the β
-adrenergic receptor in its apo form and seven ligand complexes using
H/
N NMR spectroscopy. We observe three major exchanging conformations: an inactive conformation (C
), a preactive conformation (C
) and an active conformation (C
), which becomes fully populated in a ternary complex with a G protein mimicking nanobody. The C
↔ C
exchange occurs on the microsecond scale, the C
↔ C
exchange is slower than ~5 ms and only occurs in the presence of two highly conserved tyrosines (Y
, Y
), which stabilize the active conformation of TM6. The C
→C
chemical shift changes indicate a pivoting motion of the entire TM6 that couples the effector site to the orthosteric ligand pocket.</description><subject>Algorithms</subject><subject>Allosteric Regulation</subject><subject>Animals</subject><subject>Humans</subject><subject>Ligands</subject><subject>Magnetic Resonance Spectroscopy - methods</subject><subject>Models, Molecular</subject><subject>Models, Theoretical</subject><subject>Protein Binding</subject><subject>Protein Conformation</subject><subject>Receptors, Adrenergic, beta-1 - chemistry</subject><subject>Receptors, Adrenergic, beta-1 - genetics</subject><subject>Receptors, Adrenergic, beta-1 - metabolism</subject><subject>Receptors, G-Protein-Coupled - chemistry</subject><subject>Receptors, G-Protein-Coupled - genetics</subject><subject>Receptors, G-Protein-Coupled - metabolism</subject><subject>Sf9 Cells</subject><subject>Spodoptera</subject><issn>2041-1723</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFzk0KwjAUBOAgiIp6BXkXKJimoF2KKG50Ie4lTV5rNE3CSwt6LQ_imfxB185mZvEtpsMG6TTjCZ-los_GMZ6nr4icz7Osx_oiFTOe53zArgs4meqUEEZv28Z4BxqjIhM-25fwuAOHRGpCh1QZBYQKQ-MJytapt5IW9M3J2qgI0mmQ1vrYIL2s8m2wxlVQkq-hkOpSeIew2-5HrFtKG3H87SGbrFeH5SYJbVGjPgYytaTb8XdV_AVPap5MfQ</recordid><startdate>20200505</startdate><enddate>20200505</enddate><creator>Grahl, Anne</creator><creator>Abiko, Layara Akemi</creator><creator>Isogai, Shin</creator><creator>Sharpe, Timothy</creator><creator>Grzesiek, Stephan</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><orcidid>https://orcid.org/0000-0003-1998-4225</orcidid><orcidid>https://orcid.org/0000-0003-3537-534X</orcidid><orcidid>https://orcid.org/0000-0002-3768-6427</orcidid><orcidid>https://orcid.org/0000-0002-4980-1330</orcidid></search><sort><creationdate>20200505</creationdate><title>A high-resolution description of β 1 -adrenergic receptor functional dynamics and allosteric coupling from backbone NMR</title><author>Grahl, Anne ; Abiko, Layara Akemi ; Isogai, Shin ; Sharpe, Timothy ; Grzesiek, Stephan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-pubmed_primary_323719913</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Algorithms</topic><topic>Allosteric Regulation</topic><topic>Animals</topic><topic>Humans</topic><topic>Ligands</topic><topic>Magnetic Resonance Spectroscopy - methods</topic><topic>Models, Molecular</topic><topic>Models, Theoretical</topic><topic>Protein Binding</topic><topic>Protein Conformation</topic><topic>Receptors, Adrenergic, beta-1 - chemistry</topic><topic>Receptors, Adrenergic, beta-1 - genetics</topic><topic>Receptors, Adrenergic, beta-1 - metabolism</topic><topic>Receptors, G-Protein-Coupled - chemistry</topic><topic>Receptors, G-Protein-Coupled - genetics</topic><topic>Receptors, G-Protein-Coupled - metabolism</topic><topic>Sf9 Cells</topic><topic>Spodoptera</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Grahl, Anne</creatorcontrib><creatorcontrib>Abiko, Layara Akemi</creatorcontrib><creatorcontrib>Isogai, Shin</creatorcontrib><creatorcontrib>Sharpe, Timothy</creatorcontrib><creatorcontrib>Grzesiek, Stephan</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><jtitle>Nature communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Grahl, Anne</au><au>Abiko, Layara Akemi</au><au>Isogai, Shin</au><au>Sharpe, Timothy</au><au>Grzesiek, Stephan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A high-resolution description of β 1 -adrenergic receptor functional dynamics and allosteric coupling from backbone NMR</atitle><jtitle>Nature communications</jtitle><addtitle>Nat Commun</addtitle><date>2020-05-05</date><risdate>2020</risdate><volume>11</volume><issue>1</issue><spage>2216</spage><pages>2216-</pages><eissn>2041-1723</eissn><abstract>Signal transmission and regulation of G-protein-coupled receptors (GPCRs) by extra- and intracellular ligands occurs via modulation of complex conformational equilibria, but their exact kinetic details and underlying atomic mechanisms are unknown. Here we quantified these dynamic equilibria in the β
-adrenergic receptor in its apo form and seven ligand complexes using
H/
N NMR spectroscopy. We observe three major exchanging conformations: an inactive conformation (C
), a preactive conformation (C
) and an active conformation (C
), which becomes fully populated in a ternary complex with a G protein mimicking nanobody. The C
↔ C
exchange occurs on the microsecond scale, the C
↔ C
exchange is slower than ~5 ms and only occurs in the presence of two highly conserved tyrosines (Y
, Y
), which stabilize the active conformation of TM6. The C
→C
chemical shift changes indicate a pivoting motion of the entire TM6 that couples the effector site to the orthosteric ligand pocket.</abstract><cop>England</cop><pmid>32371991</pmid><orcidid>https://orcid.org/0000-0003-1998-4225</orcidid><orcidid>https://orcid.org/0000-0003-3537-534X</orcidid><orcidid>https://orcid.org/0000-0002-3768-6427</orcidid><orcidid>https://orcid.org/0000-0002-4980-1330</orcidid></addata></record> |
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source | MEDLINE; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Springer Nature OA Free Journals; Nature Free; PubMed Central; Alma/SFX Local Collection |
subjects | Algorithms Allosteric Regulation Animals Humans Ligands Magnetic Resonance Spectroscopy - methods Models, Molecular Models, Theoretical Protein Binding Protein Conformation Receptors, Adrenergic, beta-1 - chemistry Receptors, Adrenergic, beta-1 - genetics Receptors, Adrenergic, beta-1 - metabolism Receptors, G-Protein-Coupled - chemistry Receptors, G-Protein-Coupled - genetics Receptors, G-Protein-Coupled - metabolism Sf9 Cells Spodoptera |
title | A high-resolution description of β 1 -adrenergic receptor functional dynamics and allosteric coupling from backbone NMR |
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