gplas: a comprehensive tool for plasmid analysis using short-read graphs

Abstract Summary Plasmids can horizontally transmit genetic traits, enabling rapid bacterial adaptation to new environments and hosts. Short-read whole-genome sequencing data are often applied to large-scale bacterial comparative genomics projects but the reconstruction of plasmids from these data i...

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Veröffentlicht in:	Bioinformatics 2020-06, Vol.36 (12), p.3874-3876
Hauptverfasser:	Arredondo-Alonso, Sergio, Bootsma, Martin, Hein, Yaïr, Rogers, Malbert R C, Corander, Jukka, Willems, Rob J L, Schürch, Anita C
Format:	Artikel
Sprache:	eng
Schlagworte:	Applications Notes Genome, Bacterial Genomics High-Throughput Nucleotide Sequencing Plasmids - genetics Sequence Analysis, DNA Software Whole Genome Sequencing
Online-Zugang:	Volltext
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