Increase in Strain Energy during Conversion of [4.4.4.5]Fenestrane to [4.4.4.4]Fenestrane: a Method for Estimating the Heats of Formation of Hydrocarbons and Their Derivatives from Ab Initio Energies
Our interest in fenestranes led us to wonder how large the change in strain energy with changes in the ring size might be. This led us to consider if satisfactory estimates of heat of formation could be easily derived from ab initio calculated energies. We started by examining 21 hydrocarbons having...
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description | Our interest in fenestranes led us to wonder how large the change in strain energy with changes in the ring size might be. This led us to consider if satisfactory estimates of heat of formation could be easily derived from ab initio calculated energies. We started by examining 21 hydrocarbons having well-determined heats of formation via calculations of their enthalpies using W1BD, G4, CBS-APNO, CBS-QB3, and M062X. Making use of the molecular formula and an initial estimate of the energy of a hydrogen atom and of a carbon atom, along with the ab initio enthalpy, we calculated their heats of formation. The carbon energy parameter was adjusted slightly for each model to get the best fit between experiment and our estimate. This approach worked out very well giving an root mean square error of about 0.4 kcal/mol for most methods. This approach was also extended to a larger group of hydrocarbons, and the results were found to be generally useful. The extension to O and N compounds also was examined giving equally good results for the O-containing compounds but somewhat less satisfactory with N-containing compounds. In use, the procedure requires only the molecular formula, the calculated energy, and C, H, O, and N atomic constants given in the tables. |
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This led us to consider if satisfactory estimates of heat of formation could be easily derived from ab initio calculated energies. We started by examining 21 hydrocarbons having well-determined heats of formation via calculations of their enthalpies using W1BD, G4, CBS-APNO, CBS-QB3, and M062X. Making use of the molecular formula and an initial estimate of the energy of a hydrogen atom and of a carbon atom, along with the ab initio enthalpy, we calculated their heats of formation. The carbon energy parameter was adjusted slightly for each model to get the best fit between experiment and our estimate. This approach worked out very well giving an root mean square error of about 0.4 kcal/mol for most methods. This approach was also extended to a larger group of hydrocarbons, and the results were found to be generally useful. The extension to O and N compounds also was examined giving equally good results for the O-containing compounds but somewhat less satisfactory with N-containing compounds. In use, the procedure requires only the molecular formula, the calculated energy, and C, H, O, and N atomic constants given in the tables.</description><identifier>ISSN: 0022-3263</identifier><identifier>EISSN: 1520-6904</identifier><identifier>DOI: 10.1021/acs.joc.0c00187</identifier><identifier>PMID: 32130009</identifier><language>eng</language><publisher>WASHINGTON: American Chemical Society</publisher><subject>Chemistry ; Chemistry, Organic ; Physical Sciences ; Science & Technology</subject><ispartof>Journal of organic chemistry, 2020-04, Vol.85 (7), p.4981-4987</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>6</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000526406600036</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-a333t-a829f3fdf3a64c53266ca982a6f63d6331bff088932fe82ff6027d4b7a83dcfb3</citedby><cites>FETCH-LOGICAL-a333t-a829f3fdf3a64c53266ca982a6f63d6331bff088932fe82ff6027d4b7a83dcfb3</cites><orcidid>0000-0002-1300-1999 ; 0000-0001-8588-9854</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.joc.0c00187$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.joc.0c00187$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>315,782,786,2769,27085,27933,27934,28257,56747,56797</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32130009$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wiberg, Kenneth B</creatorcontrib><creatorcontrib>Rablen, Paul R</creatorcontrib><title>Increase in Strain Energy during Conversion of [4.4.4.5]Fenestrane to [4.4.4.4]Fenestrane: a Method for Estimating the Heats of Formation of Hydrocarbons and Their Derivatives from Ab Initio Energies</title><title>Journal of organic chemistry</title><addtitle>J ORG CHEM</addtitle><addtitle>J. Org. Chem</addtitle><description>Our interest in fenestranes led us to wonder how large the change in strain energy with changes in the ring size might be. This led us to consider if satisfactory estimates of heat of formation could be easily derived from ab initio calculated energies. We started by examining 21 hydrocarbons having well-determined heats of formation via calculations of their enthalpies using W1BD, G4, CBS-APNO, CBS-QB3, and M062X. Making use of the molecular formula and an initial estimate of the energy of a hydrogen atom and of a carbon atom, along with the ab initio enthalpy, we calculated their heats of formation. The carbon energy parameter was adjusted slightly for each model to get the best fit between experiment and our estimate. This approach worked out very well giving an root mean square error of about 0.4 kcal/mol for most methods. This approach was also extended to a larger group of hydrocarbons, and the results were found to be generally useful. The extension to O and N compounds also was examined giving equally good results for the O-containing compounds but somewhat less satisfactory with N-containing compounds. In use, the procedure requires only the molecular formula, the calculated energy, and C, H, O, and N atomic constants given in the tables.</description><subject>Chemistry</subject><subject>Chemistry, Organic</subject><subject>Physical Sciences</subject><subject>Science & Technology</subject><issn>0022-3263</issn><issn>1520-6904</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>AOWDO</sourceid><recordid>eNqNkU1vEzEQhi0EoqFw5oZ8REKb-mPX2eVWbRMSqYgD5YTQymuPG1eJXWxvUH4hfwsvmxYuSNiHsUfPvJqZF6HXlMwpYfRCqji_82pOFCG0XjxBM1oxUoiGlE_RjBDGCs4EP0MvYrwj-VRV9RydcUZ5_jQz9HPjVAAZAVuHP6cgc1g6CLdHrIdg3S1uvTtAiNY77A3-Ws7HW31bgYOYeQc4-Yd0-Vf6PZb4I6St19j4gJcx2b1Mo2LaAl6DTHEUXPkwpif19VEHr2TovYtYOo1vtmADvoJgDxk6QMQm-D2-7PHG2Vw19WohvkTPjNxFeHWK5-jLannTrovrTx827eV1ITnnqZA1aww32nApSlXl3Qglm5pJYQTXgnPaG0PquuHMQM2MEYQtdNkvZM21Mj0_R28n3fvgvw951G5vo4LdLk_sh9gxvqC1KKuGZPRiQlXwMQYw3X3IKwjHjpJudK_L7nXZve7kXq54cxIf-j3oR_7BrgzUE_ADem-isuAUPGKjvUyURIj84qK16fdiWz-4lEvf_X_pH3pqcQguL_Wfff8CsLjHJg</recordid><startdate>20200403</startdate><enddate>20200403</enddate><creator>Wiberg, Kenneth B</creator><creator>Rablen, Paul R</creator><general>American Chemical Society</general><general>Amer Chemical Soc</general><scope>AOWDO</scope><scope>BLEPL</scope><scope>DTL</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-1300-1999</orcidid><orcidid>https://orcid.org/0000-0001-8588-9854</orcidid></search><sort><creationdate>20200403</creationdate><title>Increase in Strain Energy during Conversion of [4.4.4.5]Fenestrane to [4.4.4.4]Fenestrane: a Method for Estimating the Heats of Formation of Hydrocarbons and Their Derivatives from Ab Initio Energies</title><author>Wiberg, Kenneth B ; Rablen, Paul R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a333t-a829f3fdf3a64c53266ca982a6f63d6331bff088932fe82ff6027d4b7a83dcfb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Chemistry</topic><topic>Chemistry, Organic</topic><topic>Physical Sciences</topic><topic>Science & Technology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wiberg, Kenneth B</creatorcontrib><creatorcontrib>Rablen, Paul R</creatorcontrib><collection>Web of Science - Science Citation Index Expanded - 2020</collection><collection>Web of Science Core Collection</collection><collection>Science Citation Index Expanded</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of organic chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wiberg, Kenneth B</au><au>Rablen, Paul R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Increase in Strain Energy during Conversion of [4.4.4.5]Fenestrane to [4.4.4.4]Fenestrane: a Method for Estimating the Heats of Formation of Hydrocarbons and Their Derivatives from Ab Initio Energies</atitle><jtitle>Journal of organic chemistry</jtitle><stitle>J ORG CHEM</stitle><addtitle>J. Org. Chem</addtitle><date>2020-04-03</date><risdate>2020</risdate><volume>85</volume><issue>7</issue><spage>4981</spage><epage>4987</epage><pages>4981-4987</pages><issn>0022-3263</issn><eissn>1520-6904</eissn><abstract>Our interest in fenestranes led us to wonder how large the change in strain energy with changes in the ring size might be. This led us to consider if satisfactory estimates of heat of formation could be easily derived from ab initio calculated energies. We started by examining 21 hydrocarbons having well-determined heats of formation via calculations of their enthalpies using W1BD, G4, CBS-APNO, CBS-QB3, and M062X. Making use of the molecular formula and an initial estimate of the energy of a hydrogen atom and of a carbon atom, along with the ab initio enthalpy, we calculated their heats of formation. The carbon energy parameter was adjusted slightly for each model to get the best fit between experiment and our estimate. This approach worked out very well giving an root mean square error of about 0.4 kcal/mol for most methods. This approach was also extended to a larger group of hydrocarbons, and the results were found to be generally useful. The extension to O and N compounds also was examined giving equally good results for the O-containing compounds but somewhat less satisfactory with N-containing compounds. In use, the procedure requires only the molecular formula, the calculated energy, and C, H, O, and N atomic constants given in the tables.</abstract><cop>WASHINGTON</cop><pub>American Chemical Society</pub><pmid>32130009</pmid><doi>10.1021/acs.joc.0c00187</doi><tpages>7</tpages><orcidid>https://orcid.org/0000-0002-1300-1999</orcidid><orcidid>https://orcid.org/0000-0001-8588-9854</orcidid></addata></record> |
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subjects | Chemistry Chemistry, Organic Physical Sciences Science & Technology |
title | Increase in Strain Energy during Conversion of [4.4.4.5]Fenestrane to [4.4.4.4]Fenestrane: a Method for Estimating the Heats of Formation of Hydrocarbons and Their Derivatives from Ab Initio Energies |
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