Dynamic 13 C Flux Analysis Captures the Reorganization of Adipocyte Glucose Metabolism in Response to Insulin

Cellular metabolism is dynamic, but quantifying non-steady metabolic fluxes by stable isotope tracers presents unique computational challenges. Here, we developed an efficient C-tracer dynamic metabolic flux analysis (13C-DMFA) framework for modeling central carbon fluxes that vary over time. We use...

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Veröffentlicht in:iScience 2020-02, Vol.23 (2), p.100855
Hauptverfasser: Quek, Lake-Ee, Krycer, James R, Ohno, Satoshi, Yugi, Katsuyuki, Fazakerley, Daniel J, Scalzo, Richard, Elkington, Sarah D, Dai, Ziwei, Hirayama, Akiyoshi, Ikeda, Satsuki, Shoji, Futaba, Suzuki, Kumi, Locasale, Jason W, Soga, Tomoyoshi, James, David E, Kuroda, Shinya
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container_issue 2
container_start_page 100855
container_title iScience
container_volume 23
creator Quek, Lake-Ee
Krycer, James R
Ohno, Satoshi
Yugi, Katsuyuki
Fazakerley, Daniel J
Scalzo, Richard
Elkington, Sarah D
Dai, Ziwei
Hirayama, Akiyoshi
Ikeda, Satsuki
Shoji, Futaba
Suzuki, Kumi
Locasale, Jason W
Soga, Tomoyoshi
James, David E
Kuroda, Shinya
description Cellular metabolism is dynamic, but quantifying non-steady metabolic fluxes by stable isotope tracers presents unique computational challenges. Here, we developed an efficient C-tracer dynamic metabolic flux analysis (13C-DMFA) framework for modeling central carbon fluxes that vary over time. We used B-splines to generalize the flux parameterization system and to improve the stability of the optimization algorithm. As proof of concept, we investigated how 3T3-L1 cultured adipocytes acutely metabolize glucose in response to insulin. Insulin rapidly stimulates glucose uptake, but intracellular pathways responded with differing speeds and magnitudes. Fluxes in lower glycolysis increased faster than those in upper glycolysis. Glycolysis fluxes rose disproportionally larger and faster than the tricarboxylic acid cycle, with lactate a primary glucose end product. The uncovered array of flux dynamics suggests that glucose catabolism is additionally regulated beyond uptake to help shunt glucose into appropriate pathways. This work demonstrates the value of using dynamic intracellular fluxes to understand metabolic function and pathway regulation.
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title Dynamic 13 C Flux Analysis Captures the Reorganization of Adipocyte Glucose Metabolism in Response to Insulin
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