Genomic and Epigenomic Alterations in Chronic Lymphocytic Leukemia
Chronic lymphocytic leukemia is a common disease in Western countries and has heterogeneous clinical behavior. The relevance of the genetic basis of the disease has come to the forefront recently, with genome-wide studies that have provided a comprehensive view of structural variants, somatic mutati...
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Veröffentlicht in: | Annual review of pathology 2020-01, Vol.15 (1), p.149-177 |
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description | Chronic lymphocytic leukemia is a common disease in Western countries and has heterogeneous clinical behavior. The relevance of the genetic basis of the disease has come to the forefront recently, with genome-wide studies that have provided a comprehensive view of structural variants, somatic mutations, and different layers of epigenetic changes. The mutational landscape is characterized by relatively common copy number alterations, a few mutated genes occurring in 10-15% of cases, and a large number of genes mutated in a small number of cases. The epigenomic profile has revealed a marked reprogramming of regulatory regions in tumor cells compared with normal B cells. All of these alterations are differentially distributed in clinical and biological subsets of the disease, indicating that they may underlie the heterogeneous evolution of the disease. These global studies are revealing the molecular complexity of chronic lymphocytic leukemia and provide new perspectives that have helped to understand its pathogenic mechanisms and improve the clinical management of patients. |
doi_str_mv | 10.1146/annurev-pathmechdis-012419-032810 |
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The relevance of the genetic basis of the disease has come to the forefront recently, with genome-wide studies that have provided a comprehensive view of structural variants, somatic mutations, and different layers of epigenetic changes. The mutational landscape is characterized by relatively common copy number alterations, a few mutated genes occurring in 10-15% of cases, and a large number of genes mutated in a small number of cases. The epigenomic profile has revealed a marked reprogramming of regulatory regions in tumor cells compared with normal B cells. All of these alterations are differentially distributed in clinical and biological subsets of the disease, indicating that they may underlie the heterogeneous evolution of the disease. These global studies are revealing the molecular complexity of chronic lymphocytic leukemia and provide new perspectives that have helped to understand its pathogenic mechanisms and improve the clinical management of patients.</description><subject>chronic lymphocytic leukemia</subject><subject>cytogenetics</subject><subject>DNA Copy Number Variations</subject><subject>Epigenesis, Genetic - physiology</subject><subject>Epigenomics</subject><subject>Genome, Human - physiology</subject><subject>genomics</subject><subject>Genomics - methods</subject><subject>Humans</subject><subject>Leukemia, Lymphocytic, Chronic, B-Cell - genetics</subject><subject>Leukemia, Lymphocytic, Chronic, B-Cell - pathology</subject><subject>Mutation - physiology</subject><subject>next-generation sequencing</subject><issn>1553-4006</issn><issn>1553-4014</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqdkMtOwzAQRS0EoqXwC6hLWATs-JUsS9UWpEpsYG25zoQYEifYCah_T6qEijWreejqjOYgdEvwHSFM3GvnOg9fUaPbogJTZDZEmMSMpBGmcULwCZoSzmnEMGGnxx6LCboI4R1jRkWSnKMJJamUcSqm6GEDrq6smWuXzVeNfRvHRdmC162tXZhbN18Wvnb9eruvmqI2-_bQQ_cBldWX6CzXZYCrsc7Q63r1snyMts-bp-ViG2maijaSkMYmzbBISM5MhukukSKXwA3lfEe0EITk_ZtYM5EnDCeZ5FIwEBiolAzTGboZuI2vPzsIrapsMFCW2kHdBRVTxjlOOeN9dDFEja9D8JCrxttK-70iWB1UqlGl-qNSDSrVoLJnXI_nul0F2ZHw664PrIfAgaXLnmbhO_zj0g-U4o4N</recordid><startdate>20200124</startdate><enddate>20200124</enddate><creator>Nadeu, Ferran</creator><creator>Diaz-Navarro, Ander</creator><creator>Delgado, Julio</creator><creator>Puente, Xose S</creator><creator>Campo, Elías</creator><general>Annual Reviews</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20200124</creationdate><title>Genomic and Epigenomic Alterations in Chronic Lymphocytic Leukemia</title><author>Nadeu, Ferran ; Diaz-Navarro, Ander ; Delgado, Julio ; Puente, Xose S ; Campo, Elías</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a396t-7e92c9d0681f4cd03b876f7e5c355b1a6611f1140a46f8408d75764e60e377403</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>chronic lymphocytic leukemia</topic><topic>cytogenetics</topic><topic>DNA Copy Number Variations</topic><topic>Epigenesis, Genetic - physiology</topic><topic>Epigenomics</topic><topic>Genome, Human - physiology</topic><topic>genomics</topic><topic>Genomics - methods</topic><topic>Humans</topic><topic>Leukemia, Lymphocytic, Chronic, B-Cell - genetics</topic><topic>Leukemia, Lymphocytic, Chronic, B-Cell - pathology</topic><topic>Mutation - physiology</topic><topic>next-generation sequencing</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nadeu, Ferran</creatorcontrib><creatorcontrib>Diaz-Navarro, Ander</creatorcontrib><creatorcontrib>Delgado, Julio</creatorcontrib><creatorcontrib>Puente, Xose S</creatorcontrib><creatorcontrib>Campo, Elías</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Annual review of pathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nadeu, Ferran</au><au>Diaz-Navarro, Ander</au><au>Delgado, Julio</au><au>Puente, Xose S</au><au>Campo, Elías</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genomic and Epigenomic Alterations in Chronic Lymphocytic Leukemia</atitle><jtitle>Annual review of pathology</jtitle><addtitle>Annu Rev Pathol</addtitle><date>2020-01-24</date><risdate>2020</risdate><volume>15</volume><issue>1</issue><spage>149</spage><epage>177</epage><pages>149-177</pages><issn>1553-4006</issn><eissn>1553-4014</eissn><abstract>Chronic lymphocytic leukemia is a common disease in Western countries and has heterogeneous clinical behavior. 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subjects | chronic lymphocytic leukemia cytogenetics DNA Copy Number Variations Epigenesis, Genetic - physiology Epigenomics Genome, Human - physiology genomics Genomics - methods Humans Leukemia, Lymphocytic, Chronic, B-Cell - genetics Leukemia, Lymphocytic, Chronic, B-Cell - pathology Mutation - physiology next-generation sequencing |
title | Genomic and Epigenomic Alterations in Chronic Lymphocytic Leukemia |
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