Characterization of ranaviruses isolated from lumpfish Cyclopterus lumpus L. in the North Atlantic area: proposal for a new ranavirus species (European North Atlantic Ranavirus)
The commercial production of lumpfish L. is expanding with the increased demand for their use as cleaner fish, to control sea-lice numbers, at marine Atlantic salmon L. aquaculture sites throughout Northern Europe. A new ranavirus has been isolated from lumpfish at multiple locations in the North At...
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Veröffentlicht in: | Journal of general virology 2020-01, Vol.101 (2), p.198 |
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creator | Stagg, Hannah E B Guðmundsdóttir, Sigríður Vendramin, Niccolò Ruane, Neil M Sigurðardóttir, Heiða Christiansen, Debes H Cuenca, Argelia Petersen, Petra E Munro, Eann S Popov, Vsevolod L Subramaniam, Kuttichantran Imnoi, Kamonchai Waltzek, Thomas B Olesen, Niels Jørgen |
description | The commercial production of lumpfish
L. is expanding with the increased demand for their use as cleaner fish, to control sea-lice numbers, at marine Atlantic salmon
L. aquaculture sites throughout Northern Europe. A new ranavirus has been isolated from lumpfish at multiple locations in the North Atlantic area. First isolated in 2014 in the Faroe Islands, the virus has subsequently been found in lumpfish from Iceland in 2015 and from Scotland and Ireland in 2016. The Icelandic lumpfish ranavirus has been characterized by immunofluorescent antibody test, optimal growth conditions and transmission electron microscopy. Partial sequences of the major capsid protein gene from 12 isolates showed 99.79-100% nt identity between the lumpfish ranaviruses. Complete genome sequencing from three of the isolates and phylogenetic analysis based on the concatenated 26 iridovirus core genes suggest these lumpfish ranavirus isolates form a distinct clade with ranaviruses from cod
L. and turbot
L. isolated in Denmark in 1979 and 1999, respectively. These data suggest that these viruses should be grouped together as a new ranavirus species, European North Atlantic Ranavirus, which encompasses ranaviruses isolated from marine fishes in European North Atlantic waters. |
doi_str_mv | 10.1099/jgv.0.001377 |
format | Article |
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L. is expanding with the increased demand for their use as cleaner fish, to control sea-lice numbers, at marine Atlantic salmon
L. aquaculture sites throughout Northern Europe. A new ranavirus has been isolated from lumpfish at multiple locations in the North Atlantic area. First isolated in 2014 in the Faroe Islands, the virus has subsequently been found in lumpfish from Iceland in 2015 and from Scotland and Ireland in 2016. The Icelandic lumpfish ranavirus has been characterized by immunofluorescent antibody test, optimal growth conditions and transmission electron microscopy. Partial sequences of the major capsid protein gene from 12 isolates showed 99.79-100% nt identity between the lumpfish ranaviruses. Complete genome sequencing from three of the isolates and phylogenetic analysis based on the concatenated 26 iridovirus core genes suggest these lumpfish ranavirus isolates form a distinct clade with ranaviruses from cod
L. and turbot
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L. is expanding with the increased demand for their use as cleaner fish, to control sea-lice numbers, at marine Atlantic salmon
L. aquaculture sites throughout Northern Europe. A new ranavirus has been isolated from lumpfish at multiple locations in the North Atlantic area. First isolated in 2014 in the Faroe Islands, the virus has subsequently been found in lumpfish from Iceland in 2015 and from Scotland and Ireland in 2016. The Icelandic lumpfish ranavirus has been characterized by immunofluorescent antibody test, optimal growth conditions and transmission electron microscopy. Partial sequences of the major capsid protein gene from 12 isolates showed 99.79-100% nt identity between the lumpfish ranaviruses. Complete genome sequencing from three of the isolates and phylogenetic analysis based on the concatenated 26 iridovirus core genes suggest these lumpfish ranavirus isolates form a distinct clade with ranaviruses from cod
L. and turbot
L. isolated in Denmark in 1979 and 1999, respectively. These data suggest that these viruses should be grouped together as a new ranavirus species, European North Atlantic Ranavirus, which encompasses ranaviruses isolated from marine fishes in European North Atlantic waters.</description><issn>1465-2099</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNpdUE1LwzAYDoK4Ob15lhz10JosXZN6G2V-wFAQPY-3aWIz2iYkqTL_lf_Qog7B0wPPJ--L0BklKSVFcbV9fUtJSghlnB-gKc3yRTIfhQk6DmE78lm24EdowmhBMkb5FH2WDXiQUXnzAdHYHluNPfTwZvwQVMAm2BaiqrH2tsPt0DltQoPLnWytG2ND-CZHWKfY9Dg2Cj9YHxu8jC300UgMXsE1dt46G6DF2noMuFfvfzs4OCXNuHaxGkabgv5_x9PeenmCDjW0QZ3-4gy93Kyey7tk_Xh7Xy7XiaNcxERQooGP5-ZCyIwXhRKkVnMuclIppYjSGgRhksyrXLJCCmBCs4xLweuCsorN0PlPrxuqTtUb500HfrfZ_459AQvqcyc</recordid><startdate>20200101</startdate><enddate>20200101</enddate><creator>Stagg, Hannah E B</creator><creator>Guðmundsdóttir, Sigríður</creator><creator>Vendramin, Niccolò</creator><creator>Ruane, Neil M</creator><creator>Sigurðardóttir, Heiða</creator><creator>Christiansen, Debes H</creator><creator>Cuenca, Argelia</creator><creator>Petersen, Petra E</creator><creator>Munro, Eann S</creator><creator>Popov, Vsevolod L</creator><creator>Subramaniam, Kuttichantran</creator><creator>Imnoi, Kamonchai</creator><creator>Waltzek, Thomas B</creator><creator>Olesen, Niels Jørgen</creator><scope>NPM</scope></search><sort><creationdate>20200101</creationdate><title>Characterization of ranaviruses isolated from lumpfish Cyclopterus lumpus L. in the North Atlantic area: proposal for a new ranavirus species (European North Atlantic Ranavirus)</title><author>Stagg, Hannah E B ; Guðmundsdóttir, Sigríður ; Vendramin, Niccolò ; Ruane, Neil M ; Sigurðardóttir, Heiða ; Christiansen, Debes H ; Cuenca, Argelia ; Petersen, Petra E ; Munro, Eann S ; Popov, Vsevolod L ; Subramaniam, Kuttichantran ; Imnoi, Kamonchai ; Waltzek, Thomas B ; Olesen, Niels Jørgen</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p178t-810fa7457688c4799e80de27860beee0effa803c02b6c39c8a38f347c87d913b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Stagg, Hannah E B</creatorcontrib><creatorcontrib>Guðmundsdóttir, Sigríður</creatorcontrib><creatorcontrib>Vendramin, Niccolò</creatorcontrib><creatorcontrib>Ruane, Neil M</creatorcontrib><creatorcontrib>Sigurðardóttir, Heiða</creatorcontrib><creatorcontrib>Christiansen, Debes H</creatorcontrib><creatorcontrib>Cuenca, Argelia</creatorcontrib><creatorcontrib>Petersen, Petra E</creatorcontrib><creatorcontrib>Munro, Eann S</creatorcontrib><creatorcontrib>Popov, Vsevolod L</creatorcontrib><creatorcontrib>Subramaniam, Kuttichantran</creatorcontrib><creatorcontrib>Imnoi, Kamonchai</creatorcontrib><creatorcontrib>Waltzek, Thomas B</creatorcontrib><creatorcontrib>Olesen, Niels Jørgen</creatorcontrib><collection>PubMed</collection><jtitle>Journal of general virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Stagg, Hannah E B</au><au>Guðmundsdóttir, Sigríður</au><au>Vendramin, Niccolò</au><au>Ruane, Neil M</au><au>Sigurðardóttir, Heiða</au><au>Christiansen, Debes H</au><au>Cuenca, Argelia</au><au>Petersen, Petra E</au><au>Munro, Eann S</au><au>Popov, Vsevolod L</au><au>Subramaniam, Kuttichantran</au><au>Imnoi, Kamonchai</au><au>Waltzek, Thomas B</au><au>Olesen, Niels Jørgen</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of ranaviruses isolated from lumpfish Cyclopterus lumpus L. in the North Atlantic area: proposal for a new ranavirus species (European North Atlantic Ranavirus)</atitle><jtitle>Journal of general virology</jtitle><addtitle>J Gen Virol</addtitle><date>2020-01-01</date><risdate>2020</risdate><volume>101</volume><issue>2</issue><spage>198</spage><pages>198-</pages><eissn>1465-2099</eissn><abstract>The commercial production of lumpfish
L. is expanding with the increased demand for their use as cleaner fish, to control sea-lice numbers, at marine Atlantic salmon
L. aquaculture sites throughout Northern Europe. A new ranavirus has been isolated from lumpfish at multiple locations in the North Atlantic area. First isolated in 2014 in the Faroe Islands, the virus has subsequently been found in lumpfish from Iceland in 2015 and from Scotland and Ireland in 2016. The Icelandic lumpfish ranavirus has been characterized by immunofluorescent antibody test, optimal growth conditions and transmission electron microscopy. Partial sequences of the major capsid protein gene from 12 isolates showed 99.79-100% nt identity between the lumpfish ranaviruses. Complete genome sequencing from three of the isolates and phylogenetic analysis based on the concatenated 26 iridovirus core genes suggest these lumpfish ranavirus isolates form a distinct clade with ranaviruses from cod
L. and turbot
L. isolated in Denmark in 1979 and 1999, respectively. These data suggest that these viruses should be grouped together as a new ranavirus species, European North Atlantic Ranavirus, which encompasses ranaviruses isolated from marine fishes in European North Atlantic waters.</abstract><cop>England</cop><pmid>31904317</pmid><doi>10.1099/jgv.0.001377</doi></addata></record> |
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source | Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
title | Characterization of ranaviruses isolated from lumpfish Cyclopterus lumpus L. in the North Atlantic area: proposal for a new ranavirus species (European North Atlantic Ranavirus) |
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