Luteimonas lumbrici sp. nov., a novel bacterium isolated from wormcast
A Gram-stain-negative, yellow-green bacterium, designated 1.1416(T), was isolated from wormcast of Eisenia foetida. The strain was non-motile, rod-shaped, and grew optimally on NA medium at 30 degrees C, pH 7.0 and with 0 % (w/v) NaCl. On the basis of the 16S rRNA gene sequence and phylogenetic anal...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2020-01, Vol.70 (1), p.604-610 |
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| creator | Cha, Qi-Yan Zhou, Xing-Kui Zhang, Xiao-Fei Li, Miao Wei, Yu-Qian Zhang, Ti-Kun Qin, Shi-Chun Liu, Zi-Yi Wang, Xue-Jian Liu, Jian-Jin Zhu, Ming-Liang Mo, Ming-He |
| description | A Gram-stain-negative, yellow-green bacterium, designated 1.1416(T), was isolated from wormcast of Eisenia foetida. The strain was non-motile, rod-shaped, and grew optimally on NA medium at 30 degrees C, pH 7.0 and with 0 % (w/v) NaCl. On the basis of the 16S rRNA gene sequence and phylogenetic analysis, 1.1416(T) showed the highest degree of 16S rRNA gene sequence similarity to Luteimonas arsenica 26-35(T) (96.2 %), followed by Luteimonas lutimaris G3T (96.1 %). The respiratory quinone of 1.1416(T) was ubiquinone-8 (Q-8), and its major cellular fatty acids were iso-C-15:0 (39.8%), summed feature 9 (iso-C-17:1.9 omega c or C-16:0 10-methyl) (18.6%). The major polar lipids of 1.1416(T) were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and six unidentified phospholipids. The genomic DNA G+C content of 1.1416(T) was 71.0 mol%. According to the results of the phenotypic and chemotaxonomic phylogenetic analyses, strain 1.1416(T) represents a novel species of the genus Luteimonas, for which the name Luteimonas lumbrici sp. nov. is proposed, with strain 1.1416(T) (=KCTC 62979(T)=CCTCC AB 2018348(T)) as the type strain. |
| doi_str_mv | 10.1099/ijsem.0.003799 |
| format | Article |
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The strain was non-motile, rod-shaped, and grew optimally on NA medium at 30 degrees C, pH 7.0 and with 0 % (w/v) NaCl. On the basis of the 16S rRNA gene sequence and phylogenetic analysis, 1.1416(T) showed the highest degree of 16S rRNA gene sequence similarity to Luteimonas arsenica 26-35(T) (96.2 %), followed by Luteimonas lutimaris G3T (96.1 %). The respiratory quinone of 1.1416(T) was ubiquinone-8 (Q-8), and its major cellular fatty acids were iso-C-15:0 (39.8%), summed feature 9 (iso-C-17:1.9 omega c or C-16:0 10-methyl) (18.6%). The major polar lipids of 1.1416(T) were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and six unidentified phospholipids. The genomic DNA G+C content of 1.1416(T) was 71.0 mol%. According to the results of the phenotypic and chemotaxonomic phylogenetic analyses, strain 1.1416(T) represents a novel species of the genus Luteimonas, for which the name Luteimonas lumbrici sp. nov. is proposed, with strain 1.1416(T) (=KCTC 62979(T)=CCTCC AB 2018348(T)) as the type strain.</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.003799</identifier><identifier>PMID: 31697229</identifier><language>eng</language><publisher>LONDON: Microbiology Soc</publisher><subject>Animals ; Bacterial Typing Techniques ; Base Composition ; China ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Life Sciences & Biomedicine ; Microbiology ; Oligochaeta - microbiology ; Phospholipids - chemistry ; Phylogeny ; Pigmentation ; RNA, Ribosomal, 16S - genetics ; Science & Technology ; Sequence Analysis, DNA ; Ubiquinone - chemistry ; Xanthomonadaceae - classification ; Xanthomonadaceae - isolation & purification</subject><ispartof>International journal of systematic and evolutionary microbiology, 2020-01, Vol.70 (1), p.604-610</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>true</woscitedreferencessubscribed><woscitedreferencescount>5</woscitedreferencescount><woscitedreferencesoriginalsourcerecordid>wos000514419600083</woscitedreferencesoriginalsourcerecordid><citedby>FETCH-LOGICAL-c335t-fdbd26dfdeedf3005f7794552eb2ed4ea86207d6a02cc5a3f23b4bfae1216a543</citedby><cites>FETCH-LOGICAL-c335t-fdbd26dfdeedf3005f7794552eb2ed4ea86207d6a02cc5a3f23b4bfae1216a543</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31697229$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cha, Qi-Yan</creatorcontrib><creatorcontrib>Zhou, Xing-Kui</creatorcontrib><creatorcontrib>Zhang, Xiao-Fei</creatorcontrib><creatorcontrib>Li, Miao</creatorcontrib><creatorcontrib>Wei, Yu-Qian</creatorcontrib><creatorcontrib>Zhang, Ti-Kun</creatorcontrib><creatorcontrib>Qin, Shi-Chun</creatorcontrib><creatorcontrib>Liu, Zi-Yi</creatorcontrib><creatorcontrib>Wang, Xue-Jian</creatorcontrib><creatorcontrib>Liu, Jian-Jin</creatorcontrib><creatorcontrib>Zhu, Ming-Liang</creatorcontrib><creatorcontrib>Mo, Ming-He</creatorcontrib><title>Luteimonas lumbrici sp. nov., a novel bacterium isolated from wormcast</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>INT J SYST EVOL MICR</addtitle><addtitle>Int J Syst Evol Microbiol</addtitle><description>A Gram-stain-negative, yellow-green bacterium, designated 1.1416(T), was isolated from wormcast of Eisenia foetida. The strain was non-motile, rod-shaped, and grew optimally on NA medium at 30 degrees C, pH 7.0 and with 0 % (w/v) NaCl. On the basis of the 16S rRNA gene sequence and phylogenetic analysis, 1.1416(T) showed the highest degree of 16S rRNA gene sequence similarity to Luteimonas arsenica 26-35(T) (96.2 %), followed by Luteimonas lutimaris G3T (96.1 %). The respiratory quinone of 1.1416(T) was ubiquinone-8 (Q-8), and its major cellular fatty acids were iso-C-15:0 (39.8%), summed feature 9 (iso-C-17:1.9 omega c or C-16:0 10-methyl) (18.6%). The major polar lipids of 1.1416(T) were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and six unidentified phospholipids. The genomic DNA G+C content of 1.1416(T) was 71.0 mol%. According to the results of the phenotypic and chemotaxonomic phylogenetic analyses, strain 1.1416(T) represents a novel species of the genus Luteimonas, for which the name Luteimonas lumbrici sp. nov. is proposed, with strain 1.1416(T) (=KCTC 62979(T)=CCTCC AB 2018348(T)) as the type strain.</description><subject>Animals</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>China</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Life Sciences & Biomedicine</subject><subject>Microbiology</subject><subject>Oligochaeta - microbiology</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>Pigmentation</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Science & Technology</subject><subject>Sequence Analysis, DNA</subject><subject>Ubiquinone - chemistry</subject><subject>Xanthomonadaceae - classification</subject><subject>Xanthomonadaceae - isolation & purification</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>AOWDO</sourceid><sourceid>EIF</sourceid><recordid>eNqNkE1LAzEQhoMotlavHmWPgnadJPvRPUqxKhS86HnJJhNI2WxqkrX47926tWdPMwzPO8M8hFxTSClU1YPZBLQppAC8rKoTMqVZUcxz4NnpsWfFhFyEsAEYBgDnZMJpUZWMVVOyWvcRjXWdCEnb28YbaZKwTZPOfaX3idhXbJNGyIje9DYxwbUiokq0dzbZOW-lCPGSnGnRBrw61Bn5WD29L1_m67fn1-Xjei45z-Ncq0axQmmFqDQHyHVZVlmeM2wYqgzFomBQqkIAkzIXXDPeZI0WSBktRJ7xGbkd9269--wxxNqaILFtRYeuDzXjlC2AD8cGNB1R6V0IHnW99cYK_11TqPfu6l93NdSjuyFwc9jdNxbVEf-TNQCLEdhh43SQBjuJRwyGd2iW0WpQDAu-NFFE47ql67s4RO_-H-U__KGMTA</recordid><startdate>20200101</startdate><enddate>20200101</enddate><creator>Cha, Qi-Yan</creator><creator>Zhou, Xing-Kui</creator><creator>Zhang, Xiao-Fei</creator><creator>Li, Miao</creator><creator>Wei, Yu-Qian</creator><creator>Zhang, Ti-Kun</creator><creator>Qin, Shi-Chun</creator><creator>Liu, Zi-Yi</creator><creator>Wang, Xue-Jian</creator><creator>Liu, Jian-Jin</creator><creator>Zhu, Ming-Liang</creator><creator>Mo, Ming-He</creator><general>Microbiology Soc</general><scope>AOWDO</scope><scope>BLEPL</scope><scope>DTL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20200101</creationdate><title>Luteimonas lumbrici sp. nov., a novel bacterium isolated from wormcast</title><author>Cha, Qi-Yan ; Zhou, Xing-Kui ; Zhang, Xiao-Fei ; Li, Miao ; Wei, Yu-Qian ; Zhang, Ti-Kun ; Qin, Shi-Chun ; Liu, Zi-Yi ; Wang, Xue-Jian ; Liu, Jian-Jin ; Zhu, Ming-Liang ; Mo, Ming-He</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-fdbd26dfdeedf3005f7794552eb2ed4ea86207d6a02cc5a3f23b4bfae1216a543</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Animals</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>China</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Life Sciences & Biomedicine</topic><topic>Microbiology</topic><topic>Oligochaeta - microbiology</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>Pigmentation</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Science & Technology</topic><topic>Sequence Analysis, DNA</topic><topic>Ubiquinone - chemistry</topic><topic>Xanthomonadaceae - classification</topic><topic>Xanthomonadaceae - isolation & purification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cha, Qi-Yan</creatorcontrib><creatorcontrib>Zhou, Xing-Kui</creatorcontrib><creatorcontrib>Zhang, Xiao-Fei</creatorcontrib><creatorcontrib>Li, Miao</creatorcontrib><creatorcontrib>Wei, Yu-Qian</creatorcontrib><creatorcontrib>Zhang, Ti-Kun</creatorcontrib><creatorcontrib>Qin, Shi-Chun</creatorcontrib><creatorcontrib>Liu, Zi-Yi</creatorcontrib><creatorcontrib>Wang, Xue-Jian</creatorcontrib><creatorcontrib>Liu, Jian-Jin</creatorcontrib><creatorcontrib>Zhu, Ming-Liang</creatorcontrib><creatorcontrib>Mo, Ming-He</creatorcontrib><collection>Web of Science - Science Citation Index Expanded - 2020</collection><collection>Web of Science Core Collection</collection><collection>Science Citation Index Expanded</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cha, Qi-Yan</au><au>Zhou, Xing-Kui</au><au>Zhang, Xiao-Fei</au><au>Li, Miao</au><au>Wei, Yu-Qian</au><au>Zhang, Ti-Kun</au><au>Qin, Shi-Chun</au><au>Liu, Zi-Yi</au><au>Wang, Xue-Jian</au><au>Liu, Jian-Jin</au><au>Zhu, Ming-Liang</au><au>Mo, Ming-He</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Luteimonas lumbrici sp. nov., a novel bacterium isolated from wormcast</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><stitle>INT J SYST EVOL MICR</stitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2020-01-01</date><risdate>2020</risdate><volume>70</volume><issue>1</issue><spage>604</spage><epage>610</epage><pages>604-610</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-stain-negative, yellow-green bacterium, designated 1.1416(T), was isolated from wormcast of Eisenia foetida. The strain was non-motile, rod-shaped, and grew optimally on NA medium at 30 degrees C, pH 7.0 and with 0 % (w/v) NaCl. On the basis of the 16S rRNA gene sequence and phylogenetic analysis, 1.1416(T) showed the highest degree of 16S rRNA gene sequence similarity to Luteimonas arsenica 26-35(T) (96.2 %), followed by Luteimonas lutimaris G3T (96.1 %). The respiratory quinone of 1.1416(T) was ubiquinone-8 (Q-8), and its major cellular fatty acids were iso-C-15:0 (39.8%), summed feature 9 (iso-C-17:1.9 omega c or C-16:0 10-methyl) (18.6%). The major polar lipids of 1.1416(T) were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and six unidentified phospholipids. The genomic DNA G+C content of 1.1416(T) was 71.0 mol%. According to the results of the phenotypic and chemotaxonomic phylogenetic analyses, strain 1.1416(T) represents a novel species of the genus Luteimonas, for which the name Luteimonas lumbrici sp. nov. is proposed, with strain 1.1416(T) (=KCTC 62979(T)=CCTCC AB 2018348(T)) as the type strain.</abstract><cop>LONDON</cop><pub>Microbiology Soc</pub><pmid>31697229</pmid><doi>10.1099/ijsem.0.003799</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Animals Bacterial Typing Techniques Base Composition China DNA, Bacterial - genetics Fatty Acids - chemistry Life Sciences & Biomedicine Microbiology Oligochaeta - microbiology Phospholipids - chemistry Phylogeny Pigmentation RNA, Ribosomal, 16S - genetics Science & Technology Sequence Analysis, DNA Ubiquinone - chemistry Xanthomonadaceae - classification Xanthomonadaceae - isolation & purification |
| title | Luteimonas lumbrici sp. nov., a novel bacterium isolated from wormcast |
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