Influence of monomer deformation on the competition between two types of σ-holes in tetrel bonds
One of several tetrel (T) atoms was covalently attached to three F atoms and a substituted phenyl ring. A NH 3 base can form a tetrel bond with TF 3 C 6 H 2 R 3 (T = Si, Ge, Sn, Pb; R = H, F, CH 3 ) in a position opposite either an F atom or the ring. The σ-hole opposite the highly electron-withdraw...
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creator | Wysoki ski, Rafa Michalczyk, Mariusz Zierkiewicz, Wiktor Scheiner, Steve |
description | One of several tetrel (T) atoms was covalently attached to three F atoms and a substituted phenyl ring. A NH
3
base can form a tetrel bond with TF
3
C
6
H
2
R
3
(T = Si, Ge, Sn, Pb; R = H, F, CH
3
) in a position opposite either an F atom or the ring. The σ-hole opposite the highly electron-withdrawing F (T-F) is more intense than that opposite the ring (T-C). However, when the Lewis base deforms from a tetrahedral to a trigonal bipyramidal shape so as to accommodate the base, it is the T-C σ-hole that is more intense. Accordingly, it is the T-C tetrel-bonded complex for which there is a larger interaction energy with NH
3
, as high as 34 kcal mol
−1
. Countering this trend, it requires more energy for the TF
3
C
6
H
2
R
3
to deform into the geometry it adopts within the T-C complex than within its T-F counterpart. There is consequently a balance between the overall binding energies of the two competing sites. The smaller tetrel atoms Si and Ge, with their larger deformation energies, show a preference for T-F tetrel binding, while the T-C site is preferred by Pb which suffers from a smaller degree of deformation energy. There is a near balance for T = Sn and the two sites show comparable binding energies.
Competition between two competing sites on a tetrel atom is explained by balance between structural deformation and σ-hole intensity. |
doi_str_mv | 10.1039/c9cp01759c |
format | Article |
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3
base can form a tetrel bond with TF
3
C
6
H
2
R
3
(T = Si, Ge, Sn, Pb; R = H, F, CH
3
) in a position opposite either an F atom or the ring. The σ-hole opposite the highly electron-withdrawing F (T-F) is more intense than that opposite the ring (T-C). However, when the Lewis base deforms from a tetrahedral to a trigonal bipyramidal shape so as to accommodate the base, it is the T-C σ-hole that is more intense. Accordingly, it is the T-C tetrel-bonded complex for which there is a larger interaction energy with NH
3
, as high as 34 kcal mol
−1
. Countering this trend, it requires more energy for the TF
3
C
6
H
2
R
3
to deform into the geometry it adopts within the T-C complex than within its T-F counterpart. There is consequently a balance between the overall binding energies of the two competing sites. The smaller tetrel atoms Si and Ge, with their larger deformation energies, show a preference for T-F tetrel binding, while the T-C site is preferred by Pb which suffers from a smaller degree of deformation energy. There is a near balance for T = Sn and the two sites show comparable binding energies.
Competition between two competing sites on a tetrel atom is explained by balance between structural deformation and σ-hole intensity.</description><identifier>ISSN: 1463-9076</identifier><identifier>EISSN: 1463-9084</identifier><identifier>DOI: 10.1039/c9cp01759c</identifier><identifier>PMID: 31073577</identifier><language>eng</language><publisher>England</publisher><ispartof>Physical chemistry chemical physics : PCCP, 2019-05, Vol.21 (2), p.1336-1346</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c345t-754765ddef7068a5187d29b68edc5c81cac76f42aabb6684e71cf21687489eb83</citedby><cites>FETCH-LOGICAL-c345t-754765ddef7068a5187d29b68edc5c81cac76f42aabb6684e71cf21687489eb83</cites><orcidid>0000-0002-6495-6963 ; 0000-0003-0793-0369 ; 0000-0002-1133-3535 ; 0000-0002-4038-5959</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31073577$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wysoki ski, Rafa</creatorcontrib><creatorcontrib>Michalczyk, Mariusz</creatorcontrib><creatorcontrib>Zierkiewicz, Wiktor</creatorcontrib><creatorcontrib>Scheiner, Steve</creatorcontrib><title>Influence of monomer deformation on the competition between two types of σ-holes in tetrel bonds</title><title>Physical chemistry chemical physics : PCCP</title><addtitle>Phys Chem Chem Phys</addtitle><description>One of several tetrel (T) atoms was covalently attached to three F atoms and a substituted phenyl ring. A NH
3
base can form a tetrel bond with TF
3
C
6
H
2
R
3
(T = Si, Ge, Sn, Pb; R = H, F, CH
3
) in a position opposite either an F atom or the ring. The σ-hole opposite the highly electron-withdrawing F (T-F) is more intense than that opposite the ring (T-C). However, when the Lewis base deforms from a tetrahedral to a trigonal bipyramidal shape so as to accommodate the base, it is the T-C σ-hole that is more intense. Accordingly, it is the T-C tetrel-bonded complex for which there is a larger interaction energy with NH
3
, as high as 34 kcal mol
−1
. Countering this trend, it requires more energy for the TF
3
C
6
H
2
R
3
to deform into the geometry it adopts within the T-C complex than within its T-F counterpart. There is consequently a balance between the overall binding energies of the two competing sites. The smaller tetrel atoms Si and Ge, with their larger deformation energies, show a preference for T-F tetrel binding, while the T-C site is preferred by Pb which suffers from a smaller degree of deformation energy. There is a near balance for T = Sn and the two sites show comparable binding energies.
Competition between two competing sites on a tetrel atom is explained by balance between structural deformation and σ-hole intensity.</description><issn>1463-9076</issn><issn>1463-9084</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNpFkU1LxDAQhoMo7rp68a70KEI1aZqPHqX4sbCgBz2XNJ2ylbapScqyZ3-gf8nshysMzDDzzDvwDkKXBN8RTLN7nekBE8EyfYSmJOU0zrBMjw-14BN05twnxpgwQk_RhBIsKBNiitS8r9sReg2RqaPO9KYDG1VQG9sp35g-CuGXEGnTDeCbbasEvwII_ZWJ_HoAt9n9-Y6Xpg11EwbgLbRRafrKnaOTWrUOLvZ5hj6eHt_zl3jx-jzPHxaxpinzsWCp4KwKlwXmUjEiRZVkJZdQaaYl0UoLXqeJUmXJuUxBEF0nhEuRygxKSWfoZqc7WPM1gvNF1zgNbat6MKMrkoSSjDEqaUBvd6i2xjkLdTHYplN2XRBcbCwt8ix_21qaB_h6rzuWHVQH9M_DAFztAOv0Yfr_E_oLe6p8mw</recordid><startdate>20190522</startdate><enddate>20190522</enddate><creator>Wysoki ski, Rafa</creator><creator>Michalczyk, Mariusz</creator><creator>Zierkiewicz, Wiktor</creator><creator>Scheiner, Steve</creator><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-6495-6963</orcidid><orcidid>https://orcid.org/0000-0003-0793-0369</orcidid><orcidid>https://orcid.org/0000-0002-1133-3535</orcidid><orcidid>https://orcid.org/0000-0002-4038-5959</orcidid></search><sort><creationdate>20190522</creationdate><title>Influence of monomer deformation on the competition between two types of σ-holes in tetrel bonds</title><author>Wysoki ski, Rafa ; Michalczyk, Mariusz ; Zierkiewicz, Wiktor ; Scheiner, Steve</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c345t-754765ddef7068a5187d29b68edc5c81cac76f42aabb6684e71cf21687489eb83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wysoki ski, Rafa</creatorcontrib><creatorcontrib>Michalczyk, Mariusz</creatorcontrib><creatorcontrib>Zierkiewicz, Wiktor</creatorcontrib><creatorcontrib>Scheiner, Steve</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Physical chemistry chemical physics : PCCP</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wysoki ski, Rafa</au><au>Michalczyk, Mariusz</au><au>Zierkiewicz, Wiktor</au><au>Scheiner, Steve</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Influence of monomer deformation on the competition between two types of σ-holes in tetrel bonds</atitle><jtitle>Physical chemistry chemical physics : PCCP</jtitle><addtitle>Phys Chem Chem Phys</addtitle><date>2019-05-22</date><risdate>2019</risdate><volume>21</volume><issue>2</issue><spage>1336</spage><epage>1346</epage><pages>1336-1346</pages><issn>1463-9076</issn><eissn>1463-9084</eissn><abstract>One of several tetrel (T) atoms was covalently attached to three F atoms and a substituted phenyl ring. A NH
3
base can form a tetrel bond with TF
3
C
6
H
2
R
3
(T = Si, Ge, Sn, Pb; R = H, F, CH
3
) in a position opposite either an F atom or the ring. The σ-hole opposite the highly electron-withdrawing F (T-F) is more intense than that opposite the ring (T-C). However, when the Lewis base deforms from a tetrahedral to a trigonal bipyramidal shape so as to accommodate the base, it is the T-C σ-hole that is more intense. Accordingly, it is the T-C tetrel-bonded complex for which there is a larger interaction energy with NH
3
, as high as 34 kcal mol
−1
. Countering this trend, it requires more energy for the TF
3
C
6
H
2
R
3
to deform into the geometry it adopts within the T-C complex than within its T-F counterpart. There is consequently a balance between the overall binding energies of the two competing sites. The smaller tetrel atoms Si and Ge, with their larger deformation energies, show a preference for T-F tetrel binding, while the T-C site is preferred by Pb which suffers from a smaller degree of deformation energy. There is a near balance for T = Sn and the two sites show comparable binding energies.
Competition between two competing sites on a tetrel atom is explained by balance between structural deformation and σ-hole intensity.</abstract><cop>England</cop><pmid>31073577</pmid><doi>10.1039/c9cp01759c</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0002-6495-6963</orcidid><orcidid>https://orcid.org/0000-0003-0793-0369</orcidid><orcidid>https://orcid.org/0000-0002-1133-3535</orcidid><orcidid>https://orcid.org/0000-0002-4038-5959</orcidid><oa>free_for_read</oa></addata></record> |
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language | eng |
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source | Royal Society Of Chemistry Journals; Alma/SFX Local Collection |
title | Influence of monomer deformation on the competition between two types of σ-holes in tetrel bonds |
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