Development of a fused-sphere SAFT-γ Mie force field for poly(vinyl alcohol) and poly(ethylene)
SAFT-γ Mie, a group-contribution equation of state rooted in Statistical Associating Fluid Theory, provides an efficient framework for developing accurate, transferable coarse-grained force fields for molecular simulation. Building on the success of SAFT-γ Mie force fields for small molecules, we ad...
Gespeichert in:
Veröffentlicht in: | The Journal of chemical physics 2019-01, Vol.150 (3), p.034901-034901 |
---|---|
Hauptverfasser: | , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 034901 |
---|---|
container_issue | 3 |
container_start_page | 034901 |
container_title | The Journal of chemical physics |
container_volume | 150 |
creator | Walker, Christopher C. Genzer, Jan Santiso, Erik E. |
description | SAFT-γ Mie, a group-contribution equation of state rooted in Statistical Associating Fluid Theory, provides an efficient framework for developing accurate, transferable coarse-grained force fields for molecular simulation. Building on the success of SAFT-γ Mie force fields for small molecules, we address two key issues in extending the SAFT-γ Mie coarse-graining methodology to polymers: (1) the treatment of polymer chain rigidity and (2) the disparity between the structure of linear chains of tangent spheres and the structure of the real polymers. We use Boltzmann inversion to derive effective bond-stretching and angle-bending potentials mapped from all-atom oligomer molecular dynamics (MD) simulations to the coarse-grained sites and a fused-sphere version of SAFT-γ Mie as the basis for non-bonded interactions. The introduction of an overlap parameter between Mie spheres leads to a degeneracy when fitting to monomer vapor-liquid equilibria (VLE) data, which we resolve by matching polymer density from coarse-grained MD simulation with that from all-atom simulation. The result is a chain of monomers rigorously parameterized to experimental VLE data and with structural detail consistent with all-atom simulations. We test our approach on atactic poly(vinyl alcohol) and polyethylene and compare the results for SAFT-γ Mie models with structural detail mapped from the Optimized Potentials for Liquid Simulations (OPLS) and Condensed-phase Optimized Molecular Potentials for Atomistic Simulation Studies (COMPASS) all-atom force fields. |
doi_str_mv | 10.1063/1.5078742 |
format | Article |
fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_pubmed_primary_30660157</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2179410211</sourcerecordid><originalsourceid>FETCH-LOGICAL-c383t-e3f62894e3d258db0cb97092faaca7b6ab54044aa53bb977bb51664209de1e493</originalsourceid><addsrcrecordid>eNp90MtKxDAUBuAgio6XhS8gATeOUD1p06RZDt5BcaGua9qeMpVMU5N2YJ7L9_CZjMyooOAmCcnHf8JPyD6DEwYiOWUnKchM8niNjBhkKpJCwToZAcQsUgLEFtn2_gUAmIz5JtlKQAhgqRyR53Oco7HdDNue2ppqWg8eq8h3U3RIHyaXj9H7G71rkNbWlWFt0FSfZ9pZsziaN-3CUG1KO7VmTHVbLe-xny4MtjjeJRu1Nh73VvsOebq8eDy7jm7vr27OJrdRmWRJH2FSizhTHJMqTrOqgLJQElRca11qWQhdpBw41zpNivAiiyJlQvAYVIUMuUp2yNEyt3P2dUDf57PGl2iMbtEOPo-ZVJyFQligh7_oix1cG34XlJBcpSyFoMZLVTrrvcM671wz026RM8g_a89Zvqo92INV4lDMsPqWXz0HcLwEvmx63Te2_TZz636S8q6q_8N_R38AjKaXhg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2167495150</pqid></control><display><type>article</type><title>Development of a fused-sphere SAFT-γ Mie force field for poly(vinyl alcohol) and poly(ethylene)</title><source>AIP Journals Complete</source><source>Alma/SFX Local Collection</source><creator>Walker, Christopher C. ; Genzer, Jan ; Santiso, Erik E.</creator><creatorcontrib>Walker, Christopher C. ; Genzer, Jan ; Santiso, Erik E.</creatorcontrib><description>SAFT-γ Mie, a group-contribution equation of state rooted in Statistical Associating Fluid Theory, provides an efficient framework for developing accurate, transferable coarse-grained force fields for molecular simulation. Building on the success of SAFT-γ Mie force fields for small molecules, we address two key issues in extending the SAFT-γ Mie coarse-graining methodology to polymers: (1) the treatment of polymer chain rigidity and (2) the disparity between the structure of linear chains of tangent spheres and the structure of the real polymers. We use Boltzmann inversion to derive effective bond-stretching and angle-bending potentials mapped from all-atom oligomer molecular dynamics (MD) simulations to the coarse-grained sites and a fused-sphere version of SAFT-γ Mie as the basis for non-bonded interactions. The introduction of an overlap parameter between Mie spheres leads to a degeneracy when fitting to monomer vapor-liquid equilibria (VLE) data, which we resolve by matching polymer density from coarse-grained MD simulation with that from all-atom simulation. The result is a chain of monomers rigorously parameterized to experimental VLE data and with structural detail consistent with all-atom simulations. We test our approach on atactic poly(vinyl alcohol) and polyethylene and compare the results for SAFT-γ Mie models with structural detail mapped from the Optimized Potentials for Liquid Simulations (OPLS) and Condensed-phase Optimized Molecular Potentials for Atomistic Simulation Studies (COMPASS) all-atom force fields.</description><identifier>ISSN: 0021-9606</identifier><identifier>EISSN: 1089-7690</identifier><identifier>DOI: 10.1063/1.5078742</identifier><identifier>PMID: 30660157</identifier><identifier>CODEN: JCPSA6</identifier><language>eng</language><publisher>United States: American Institute of Physics</publisher><subject>Alcohol ; Atacticity ; Coarsening ; Computer simulation ; Equations of state ; Granulation ; Liquid-vapor equilibrium ; Molecular dynamics ; Monomers ; Polyethylenes ; Simulation</subject><ispartof>The Journal of chemical physics, 2019-01, Vol.150 (3), p.034901-034901</ispartof><rights>Author(s)</rights><rights>2019 Author(s). Published under license by AIP Publishing.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c383t-e3f62894e3d258db0cb97092faaca7b6ab54044aa53bb977bb51664209de1e493</citedby><cites>FETCH-LOGICAL-c383t-e3f62894e3d258db0cb97092faaca7b6ab54044aa53bb977bb51664209de1e493</cites><orcidid>0000-0003-0804-0835 ; 0000-0002-1633-238X ; 0000-0003-1768-8414 ; 0000000308040835 ; 0000000317688414 ; 000000021633238X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://pubs.aip.org/jcp/article-lookup/doi/10.1063/1.5078742$$EHTML$$P50$$Gscitation$$H</linktohtml><link.rule.ids>314,776,780,790,4497,27903,27904,76130</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30660157$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Walker, Christopher C.</creatorcontrib><creatorcontrib>Genzer, Jan</creatorcontrib><creatorcontrib>Santiso, Erik E.</creatorcontrib><title>Development of a fused-sphere SAFT-γ Mie force field for poly(vinyl alcohol) and poly(ethylene)</title><title>The Journal of chemical physics</title><addtitle>J Chem Phys</addtitle><description>SAFT-γ Mie, a group-contribution equation of state rooted in Statistical Associating Fluid Theory, provides an efficient framework for developing accurate, transferable coarse-grained force fields for molecular simulation. Building on the success of SAFT-γ Mie force fields for small molecules, we address two key issues in extending the SAFT-γ Mie coarse-graining methodology to polymers: (1) the treatment of polymer chain rigidity and (2) the disparity between the structure of linear chains of tangent spheres and the structure of the real polymers. We use Boltzmann inversion to derive effective bond-stretching and angle-bending potentials mapped from all-atom oligomer molecular dynamics (MD) simulations to the coarse-grained sites and a fused-sphere version of SAFT-γ Mie as the basis for non-bonded interactions. The introduction of an overlap parameter between Mie spheres leads to a degeneracy when fitting to monomer vapor-liquid equilibria (VLE) data, which we resolve by matching polymer density from coarse-grained MD simulation with that from all-atom simulation. The result is a chain of monomers rigorously parameterized to experimental VLE data and with structural detail consistent with all-atom simulations. We test our approach on atactic poly(vinyl alcohol) and polyethylene and compare the results for SAFT-γ Mie models with structural detail mapped from the Optimized Potentials for Liquid Simulations (OPLS) and Condensed-phase Optimized Molecular Potentials for Atomistic Simulation Studies (COMPASS) all-atom force fields.</description><subject>Alcohol</subject><subject>Atacticity</subject><subject>Coarsening</subject><subject>Computer simulation</subject><subject>Equations of state</subject><subject>Granulation</subject><subject>Liquid-vapor equilibrium</subject><subject>Molecular dynamics</subject><subject>Monomers</subject><subject>Polyethylenes</subject><subject>Simulation</subject><issn>0021-9606</issn><issn>1089-7690</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp90MtKxDAUBuAgio6XhS8gATeOUD1p06RZDt5BcaGua9qeMpVMU5N2YJ7L9_CZjMyooOAmCcnHf8JPyD6DEwYiOWUnKchM8niNjBhkKpJCwToZAcQsUgLEFtn2_gUAmIz5JtlKQAhgqRyR53Oco7HdDNue2ppqWg8eq8h3U3RIHyaXj9H7G71rkNbWlWFt0FSfZ9pZsziaN-3CUG1KO7VmTHVbLe-xny4MtjjeJRu1Nh73VvsOebq8eDy7jm7vr27OJrdRmWRJH2FSizhTHJMqTrOqgLJQElRca11qWQhdpBw41zpNivAiiyJlQvAYVIUMuUp2yNEyt3P2dUDf57PGl2iMbtEOPo-ZVJyFQligh7_oix1cG34XlJBcpSyFoMZLVTrrvcM671wz026RM8g_a89Zvqo92INV4lDMsPqWXz0HcLwEvmx63Te2_TZz636S8q6q_8N_R38AjKaXhg</recordid><startdate>20190121</startdate><enddate>20190121</enddate><creator>Walker, Christopher C.</creator><creator>Genzer, Jan</creator><creator>Santiso, Erik E.</creator><general>American Institute of Physics</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>H8D</scope><scope>L7M</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0804-0835</orcidid><orcidid>https://orcid.org/0000-0002-1633-238X</orcidid><orcidid>https://orcid.org/0000-0003-1768-8414</orcidid><orcidid>https://orcid.org/0000000308040835</orcidid><orcidid>https://orcid.org/0000000317688414</orcidid><orcidid>https://orcid.org/000000021633238X</orcidid></search><sort><creationdate>20190121</creationdate><title>Development of a fused-sphere SAFT-γ Mie force field for poly(vinyl alcohol) and poly(ethylene)</title><author>Walker, Christopher C. ; Genzer, Jan ; Santiso, Erik E.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c383t-e3f62894e3d258db0cb97092faaca7b6ab54044aa53bb977bb51664209de1e493</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Alcohol</topic><topic>Atacticity</topic><topic>Coarsening</topic><topic>Computer simulation</topic><topic>Equations of state</topic><topic>Granulation</topic><topic>Liquid-vapor equilibrium</topic><topic>Molecular dynamics</topic><topic>Monomers</topic><topic>Polyethylenes</topic><topic>Simulation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Walker, Christopher C.</creatorcontrib><creatorcontrib>Genzer, Jan</creatorcontrib><creatorcontrib>Santiso, Erik E.</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Aerospace Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>MEDLINE - Academic</collection><jtitle>The Journal of chemical physics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Walker, Christopher C.</au><au>Genzer, Jan</au><au>Santiso, Erik E.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Development of a fused-sphere SAFT-γ Mie force field for poly(vinyl alcohol) and poly(ethylene)</atitle><jtitle>The Journal of chemical physics</jtitle><addtitle>J Chem Phys</addtitle><date>2019-01-21</date><risdate>2019</risdate><volume>150</volume><issue>3</issue><spage>034901</spage><epage>034901</epage><pages>034901-034901</pages><issn>0021-9606</issn><eissn>1089-7690</eissn><coden>JCPSA6</coden><abstract>SAFT-γ Mie, a group-contribution equation of state rooted in Statistical Associating Fluid Theory, provides an efficient framework for developing accurate, transferable coarse-grained force fields for molecular simulation. Building on the success of SAFT-γ Mie force fields for small molecules, we address two key issues in extending the SAFT-γ Mie coarse-graining methodology to polymers: (1) the treatment of polymer chain rigidity and (2) the disparity between the structure of linear chains of tangent spheres and the structure of the real polymers. We use Boltzmann inversion to derive effective bond-stretching and angle-bending potentials mapped from all-atom oligomer molecular dynamics (MD) simulations to the coarse-grained sites and a fused-sphere version of SAFT-γ Mie as the basis for non-bonded interactions. The introduction of an overlap parameter between Mie spheres leads to a degeneracy when fitting to monomer vapor-liquid equilibria (VLE) data, which we resolve by matching polymer density from coarse-grained MD simulation with that from all-atom simulation. The result is a chain of monomers rigorously parameterized to experimental VLE data and with structural detail consistent with all-atom simulations. We test our approach on atactic poly(vinyl alcohol) and polyethylene and compare the results for SAFT-γ Mie models with structural detail mapped from the Optimized Potentials for Liquid Simulations (OPLS) and Condensed-phase Optimized Molecular Potentials for Atomistic Simulation Studies (COMPASS) all-atom force fields.</abstract><cop>United States</cop><pub>American Institute of Physics</pub><pmid>30660157</pmid><doi>10.1063/1.5078742</doi><tpages>16</tpages><orcidid>https://orcid.org/0000-0003-0804-0835</orcidid><orcidid>https://orcid.org/0000-0002-1633-238X</orcidid><orcidid>https://orcid.org/0000-0003-1768-8414</orcidid><orcidid>https://orcid.org/0000000308040835</orcidid><orcidid>https://orcid.org/0000000317688414</orcidid><orcidid>https://orcid.org/000000021633238X</orcidid></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0021-9606 |
ispartof | The Journal of chemical physics, 2019-01, Vol.150 (3), p.034901-034901 |
issn | 0021-9606 1089-7690 |
language | eng |
recordid | cdi_pubmed_primary_30660157 |
source | AIP Journals Complete; Alma/SFX Local Collection |
subjects | Alcohol Atacticity Coarsening Computer simulation Equations of state Granulation Liquid-vapor equilibrium Molecular dynamics Monomers Polyethylenes Simulation |
title | Development of a fused-sphere SAFT-γ Mie force field for poly(vinyl alcohol) and poly(ethylene) |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-24T11%3A37%3A14IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Development%20of%20a%20fused-sphere%20SAFT-%CE%B3%20Mie%20force%20field%20for%20poly(vinyl%20alcohol)%20and%20poly(ethylene)&rft.jtitle=The%20Journal%20of%20chemical%20physics&rft.au=Walker,%20Christopher%20C.&rft.date=2019-01-21&rft.volume=150&rft.issue=3&rft.spage=034901&rft.epage=034901&rft.pages=034901-034901&rft.issn=0021-9606&rft.eissn=1089-7690&rft.coden=JCPSA6&rft_id=info:doi/10.1063/1.5078742&rft_dat=%3Cproquest_pubme%3E2179410211%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2167495150&rft_id=info:pmid/30660157&rfr_iscdi=true |