How a cofactor-free protein environment lowers the barrier to O 2 reactivity
Molecular oxygen (O )-utilizing enzymes are among the most important in biology. The abundance of O , its thermodynamic power, and the benign nature of its end products have raised interest in oxidases and oxygenases for biotechnological applications. Although most O -dependent enzymes have an absol...
Gespeichert in:
Veröffentlicht in: | The Journal of biological chemistry 2019-03, Vol.294 (10), p.3661 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 10 |
container_start_page | 3661 |
container_title | The Journal of biological chemistry |
container_volume | 294 |
creator | Machovina, Melodie M Ellis, Emerald S Carney, Thomas J Brushett, Fikile R DuBois, Jennifer L |
description | Molecular oxygen (O
)-utilizing enzymes are among the most important in biology. The abundance of O
, its thermodynamic power, and the benign nature of its end products have raised interest in oxidases and oxygenases for biotechnological applications. Although most O
-dependent enzymes have an absolute requirement for an O
-activating cofactor, several classes of oxidases and oxygenases accelerate direct reactions between substrate and O
using only the protein environment. Nogalamycin monooxygenase (NMO) from
is a cofactor-independent enzyme that catalyzes rate-limiting electron transfer between its substrate and O
Here, using enzyme-kinetic, cyclic voltammetry, and mutagenesis methods, we demonstrate that NMO initially activates the substrate, lowering its p
by 1.0 unit (Δ
* = 1.4 kcal mol
). We found that the one-electron reduction potential, measured for the deprotonated substrate both inside and outside the protein environment, increases by 85 mV inside NMO, corresponding to a ΔΔ
' of 2.0 kcal mol
(0.087 eV) and that the activation barrier, Δ
, is lowered by 4.8 kcal mol
(0.21 eV). Applying the Marcus model, we observed that this suggests a sizable decrease of 28 kcal mol
(1.4 eV) in the reorganization energy (λ), which constitutes the major portion of the protein environment's effect in lowering the reaction barrier. A similar role for the protein has been proposed in several cofactor-dependent systems and may reflect a broader trend in O
-utilizing proteins. In summary, NMO's protein environment facilitates direct electron transfer, and NMO accelerates rate-limiting electron transfer by strongly lowering the reorganization energy. |
doi_str_mv | 10.1074/jbc.RA118.006144 |
format | Article |
fullrecord | <record><control><sourceid>pubmed</sourceid><recordid>TN_cdi_pubmed_primary_30602564</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>30602564</sourcerecordid><originalsourceid>FETCH-LOGICAL-p108t-5d6491283df005f535aa587d3051b45f71c97f563a7183344005c437c4def1893</originalsourceid><addsrcrecordid>eNo1j1FLwzAUhYMgbk7ffZL8gc7c3qRJH8dQJxQGouDbSNsbzFibksaN_XsLzvNyXs45fIexBxBLEFo-7etm-b4CMEshCpDyis1BGMxQwdeM3Y7jXkySJdywGYpC5KqQc1Ztwolb3gRnmxRi5iIRH2JI5HtO_dHH0HfUJ34IJ4ojT9_Eaxujp8hT4Fue80hT1R99Ot-xa2cPI91ffME-X54_1pus2r6-rVdVNkxEKVNtMWHkBlsnhHIKlbXK6BaFgloqp6EptVMFWg0GUcop1UjUjWzJgSlxwR7_doefuqN2N0Tf2Xje_d_CX51ATKs</addsrcrecordid><sourcetype>Index Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>How a cofactor-free protein environment lowers the barrier to O 2 reactivity</title><source>MEDLINE</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><source>Alma/SFX Local Collection</source><creator>Machovina, Melodie M ; Ellis, Emerald S ; Carney, Thomas J ; Brushett, Fikile R ; DuBois, Jennifer L</creator><creatorcontrib>Machovina, Melodie M ; Ellis, Emerald S ; Carney, Thomas J ; Brushett, Fikile R ; DuBois, Jennifer L</creatorcontrib><description>Molecular oxygen (O
)-utilizing enzymes are among the most important in biology. The abundance of O
, its thermodynamic power, and the benign nature of its end products have raised interest in oxidases and oxygenases for biotechnological applications. Although most O
-dependent enzymes have an absolute requirement for an O
-activating cofactor, several classes of oxidases and oxygenases accelerate direct reactions between substrate and O
using only the protein environment. Nogalamycin monooxygenase (NMO) from
is a cofactor-independent enzyme that catalyzes rate-limiting electron transfer between its substrate and O
Here, using enzyme-kinetic, cyclic voltammetry, and mutagenesis methods, we demonstrate that NMO initially activates the substrate, lowering its p
by 1.0 unit (Δ
* = 1.4 kcal mol
). We found that the one-electron reduction potential, measured for the deprotonated substrate both inside and outside the protein environment, increases by 85 mV inside NMO, corresponding to a ΔΔ
' of 2.0 kcal mol
(0.087 eV) and that the activation barrier, Δ
, is lowered by 4.8 kcal mol
(0.21 eV). Applying the Marcus model, we observed that this suggests a sizable decrease of 28 kcal mol
(1.4 eV) in the reorganization energy (λ), which constitutes the major portion of the protein environment's effect in lowering the reaction barrier. A similar role for the protein has been proposed in several cofactor-dependent systems and may reflect a broader trend in O
-utilizing proteins. In summary, NMO's protein environment facilitates direct electron transfer, and NMO accelerates rate-limiting electron transfer by strongly lowering the reorganization energy.</description><identifier>EISSN: 1083-351X</identifier><identifier>DOI: 10.1074/jbc.RA118.006144</identifier><identifier>PMID: 30602564</identifier><language>eng</language><publisher>United States</publisher><subject>Catalytic Domain ; Electron Transport ; Mixed Function Oxygenases - chemistry ; Mixed Function Oxygenases - genetics ; Mixed Function Oxygenases - metabolism ; Models, Molecular ; Mutagenesis ; Nogalamycin - metabolism ; Oxygen - metabolism ; Streptomyces - enzymology ; Temperature ; Thermodynamics</subject><ispartof>The Journal of biological chemistry, 2019-03, Vol.294 (10), p.3661</ispartof><rights>2019 Machovina et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30602564$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Machovina, Melodie M</creatorcontrib><creatorcontrib>Ellis, Emerald S</creatorcontrib><creatorcontrib>Carney, Thomas J</creatorcontrib><creatorcontrib>Brushett, Fikile R</creatorcontrib><creatorcontrib>DuBois, Jennifer L</creatorcontrib><title>How a cofactor-free protein environment lowers the barrier to O 2 reactivity</title><title>The Journal of biological chemistry</title><addtitle>J Biol Chem</addtitle><description>Molecular oxygen (O
)-utilizing enzymes are among the most important in biology. The abundance of O
, its thermodynamic power, and the benign nature of its end products have raised interest in oxidases and oxygenases for biotechnological applications. Although most O
-dependent enzymes have an absolute requirement for an O
-activating cofactor, several classes of oxidases and oxygenases accelerate direct reactions between substrate and O
using only the protein environment. Nogalamycin monooxygenase (NMO) from
is a cofactor-independent enzyme that catalyzes rate-limiting electron transfer between its substrate and O
Here, using enzyme-kinetic, cyclic voltammetry, and mutagenesis methods, we demonstrate that NMO initially activates the substrate, lowering its p
by 1.0 unit (Δ
* = 1.4 kcal mol
). We found that the one-electron reduction potential, measured for the deprotonated substrate both inside and outside the protein environment, increases by 85 mV inside NMO, corresponding to a ΔΔ
' of 2.0 kcal mol
(0.087 eV) and that the activation barrier, Δ
, is lowered by 4.8 kcal mol
(0.21 eV). Applying the Marcus model, we observed that this suggests a sizable decrease of 28 kcal mol
(1.4 eV) in the reorganization energy (λ), which constitutes the major portion of the protein environment's effect in lowering the reaction barrier. A similar role for the protein has been proposed in several cofactor-dependent systems and may reflect a broader trend in O
-utilizing proteins. In summary, NMO's protein environment facilitates direct electron transfer, and NMO accelerates rate-limiting electron transfer by strongly lowering the reorganization energy.</description><subject>Catalytic Domain</subject><subject>Electron Transport</subject><subject>Mixed Function Oxygenases - chemistry</subject><subject>Mixed Function Oxygenases - genetics</subject><subject>Mixed Function Oxygenases - metabolism</subject><subject>Models, Molecular</subject><subject>Mutagenesis</subject><subject>Nogalamycin - metabolism</subject><subject>Oxygen - metabolism</subject><subject>Streptomyces - enzymology</subject><subject>Temperature</subject><subject>Thermodynamics</subject><issn>1083-351X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo1j1FLwzAUhYMgbk7ffZL8gc7c3qRJH8dQJxQGouDbSNsbzFibksaN_XsLzvNyXs45fIexBxBLEFo-7etm-b4CMEshCpDyis1BGMxQwdeM3Y7jXkySJdywGYpC5KqQc1Ztwolb3gRnmxRi5iIRH2JI5HtO_dHH0HfUJ34IJ4ojT9_Eaxujp8hT4Fue80hT1R99Ot-xa2cPI91ffME-X54_1pus2r6-rVdVNkxEKVNtMWHkBlsnhHIKlbXK6BaFgloqp6EptVMFWg0GUcop1UjUjWzJgSlxwR7_doefuqN2N0Tf2Xje_d_CX51ATKs</recordid><startdate>20190308</startdate><enddate>20190308</enddate><creator>Machovina, Melodie M</creator><creator>Ellis, Emerald S</creator><creator>Carney, Thomas J</creator><creator>Brushett, Fikile R</creator><creator>DuBois, Jennifer L</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope></search><sort><creationdate>20190308</creationdate><title>How a cofactor-free protein environment lowers the barrier to O 2 reactivity</title><author>Machovina, Melodie M ; Ellis, Emerald S ; Carney, Thomas J ; Brushett, Fikile R ; DuBois, Jennifer L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p108t-5d6491283df005f535aa587d3051b45f71c97f563a7183344005c437c4def1893</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Catalytic Domain</topic><topic>Electron Transport</topic><topic>Mixed Function Oxygenases - chemistry</topic><topic>Mixed Function Oxygenases - genetics</topic><topic>Mixed Function Oxygenases - metabolism</topic><topic>Models, Molecular</topic><topic>Mutagenesis</topic><topic>Nogalamycin - metabolism</topic><topic>Oxygen - metabolism</topic><topic>Streptomyces - enzymology</topic><topic>Temperature</topic><topic>Thermodynamics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Machovina, Melodie M</creatorcontrib><creatorcontrib>Ellis, Emerald S</creatorcontrib><creatorcontrib>Carney, Thomas J</creatorcontrib><creatorcontrib>Brushett, Fikile R</creatorcontrib><creatorcontrib>DuBois, Jennifer L</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><jtitle>The Journal of biological chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Machovina, Melodie M</au><au>Ellis, Emerald S</au><au>Carney, Thomas J</au><au>Brushett, Fikile R</au><au>DuBois, Jennifer L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>How a cofactor-free protein environment lowers the barrier to O 2 reactivity</atitle><jtitle>The Journal of biological chemistry</jtitle><addtitle>J Biol Chem</addtitle><date>2019-03-08</date><risdate>2019</risdate><volume>294</volume><issue>10</issue><spage>3661</spage><pages>3661-</pages><eissn>1083-351X</eissn><abstract>Molecular oxygen (O
)-utilizing enzymes are among the most important in biology. The abundance of O
, its thermodynamic power, and the benign nature of its end products have raised interest in oxidases and oxygenases for biotechnological applications. Although most O
-dependent enzymes have an absolute requirement for an O
-activating cofactor, several classes of oxidases and oxygenases accelerate direct reactions between substrate and O
using only the protein environment. Nogalamycin monooxygenase (NMO) from
is a cofactor-independent enzyme that catalyzes rate-limiting electron transfer between its substrate and O
Here, using enzyme-kinetic, cyclic voltammetry, and mutagenesis methods, we demonstrate that NMO initially activates the substrate, lowering its p
by 1.0 unit (Δ
* = 1.4 kcal mol
). We found that the one-electron reduction potential, measured for the deprotonated substrate both inside and outside the protein environment, increases by 85 mV inside NMO, corresponding to a ΔΔ
' of 2.0 kcal mol
(0.087 eV) and that the activation barrier, Δ
, is lowered by 4.8 kcal mol
(0.21 eV). Applying the Marcus model, we observed that this suggests a sizable decrease of 28 kcal mol
(1.4 eV) in the reorganization energy (λ), which constitutes the major portion of the protein environment's effect in lowering the reaction barrier. A similar role for the protein has been proposed in several cofactor-dependent systems and may reflect a broader trend in O
-utilizing proteins. In summary, NMO's protein environment facilitates direct electron transfer, and NMO accelerates rate-limiting electron transfer by strongly lowering the reorganization energy.</abstract><cop>United States</cop><pmid>30602564</pmid><doi>10.1074/jbc.RA118.006144</doi><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | EISSN: 1083-351X |
ispartof | The Journal of biological chemistry, 2019-03, Vol.294 (10), p.3661 |
issn | 1083-351X |
language | eng |
recordid | cdi_pubmed_primary_30602564 |
source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central; Alma/SFX Local Collection |
subjects | Catalytic Domain Electron Transport Mixed Function Oxygenases - chemistry Mixed Function Oxygenases - genetics Mixed Function Oxygenases - metabolism Models, Molecular Mutagenesis Nogalamycin - metabolism Oxygen - metabolism Streptomyces - enzymology Temperature Thermodynamics |
title | How a cofactor-free protein environment lowers the barrier to O 2 reactivity |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-22T17%3A10%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-pubmed&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=How%20a%20cofactor-free%20protein%20environment%20lowers%20the%20barrier%20to%20O%202%20reactivity&rft.jtitle=The%20Journal%20of%20biological%20chemistry&rft.au=Machovina,%20Melodie%20M&rft.date=2019-03-08&rft.volume=294&rft.issue=10&rft.spage=3661&rft.pages=3661-&rft.eissn=1083-351X&rft_id=info:doi/10.1074/jbc.RA118.006144&rft_dat=%3Cpubmed%3E30602564%3C/pubmed%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_id=info:pmid/30602564&rfr_iscdi=true |