Pathogenesis and genetic characteristics of novel reassortant low-pathogenic avian influenza H7 viruses isolated from migratory birds in the Republic of Korea in the winter of 2016-2017
In this study, we characterized H7 subtype low-pathogenicity (LP) influenza A viruses (IAVs) isolated from wild bird habitats in the Republic of Korea from 2010 to early 2017. Through national surveillance, 104 H7 IAVs were isolated, accounting for an average of 14.9% of annual IAV isolations. In ea...
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description | In this study, we characterized H7 subtype low-pathogenicity (LP) influenza A viruses (IAVs) isolated from wild bird habitats in the Republic of Korea from 2010 to early 2017. Through national surveillance, 104 H7 IAVs were isolated, accounting for an average of 14.9% of annual IAV isolations. In early 2017, H7 subtypes accounted for an unusually high prevalence (43.6%) of IAV detections in wild birds. Phylogenetic analysis revealed that all the viruses isolated in the winter of 2016-2017 fell within cluster II of group C, belonging to the Eurasian lineage of H7 IAVs. Notably, cluster II of group C included the H7 gene from the highly pathogenic H7N7 IAV that was detected in northeastern Italy in April of 2016. Through a gene-constellation analysis, the H7 LPIAVs that we isolated constituted ≥11 distinct genotypes. Because the viruses belonging to the genotypes G2.1 and G1 were observed most frequently, we compared the replication and transmission of representative viruses to these genotypes in specific-pathogen-free chickens. Notably, the representative G2.1 strain was capable of systemic replication and efficient transmission in chickens (as evidenced by virus isolation and histopathological examination) without any clinical signs except mortality (in one infected chicken). The efficient subclinical viral replication and shedding of the G2.1 virus in chickens may facilitate its silent spread among poultry after introduction. Given that wild birds harbor novel strains that could affect poultry, our results highlight the need for enhanced IAV surveillance in both wild birds and poultry in Eurasia. |
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Through national surveillance, 104 H7 IAVs were isolated, accounting for an average of 14.9% of annual IAV isolations. In early 2017, H7 subtypes accounted for an unusually high prevalence (43.6%) of IAV detections in wild birds. Phylogenetic analysis revealed that all the viruses isolated in the winter of 2016-2017 fell within cluster II of group C, belonging to the Eurasian lineage of H7 IAVs. Notably, cluster II of group C included the H7 gene from the highly pathogenic H7N7 IAV that was detected in northeastern Italy in April of 2016. Through a gene-constellation analysis, the H7 LPIAVs that we isolated constituted ≥11 distinct genotypes. Because the viruses belonging to the genotypes G2.1 and G1 were observed most frequently, we compared the replication and transmission of representative viruses to these genotypes in specific-pathogen-free chickens. Notably, the representative G2.1 strain was capable of systemic replication and efficient transmission in chickens (as evidenced by virus isolation and histopathological examination) without any clinical signs except mortality (in one infected chicken). The efficient subclinical viral replication and shedding of the G2.1 virus in chickens may facilitate its silent spread among poultry after introduction. Given that wild birds harbor novel strains that could affect poultry, our results highlight the need for enhanced IAV surveillance in both wild birds and poultry in Eurasia.</description><identifier>ISSN: 2222-1751</identifier><identifier>EISSN: 2222-1751</identifier><identifier>DOI: 10.1038/s41426-018-0181-3</identifier><identifier>PMID: 30442892</identifier><language>eng</language><publisher>United States: Taylor & Francis</publisher><subject>Animal Migration ; Animals ; Animals, Wild - virology ; Birds - virology ; Chickens ; Cold Temperature ; Genotype ; Influenza ; Influenza A Virus, H7N7 Subtype - genetics ; Influenza A Virus, H7N7 Subtype - pathogenicity ; Influenza in Birds - epidemiology ; Phylogeny ; Poultry ; Reassortant Viruses - genetics ; Reassortant Viruses - pathogenicity ; Republic of Korea - epidemiology ; Seasons ; Surveillance ; Virus Replication ; Viruses</subject><ispartof>Emerging microbes & infections, 2018-11, Vol.7 (1), p.1-13</ispartof><rights>The Author(s) 2018 2018</rights><rights>2018. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2018. This work is licensed under the Creative Commons Attribution License https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2018</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c640t-f9962228f24bb75053959a68c0d5dc648063480f28adbf579c5e30e11efec31d3</citedby><cites>FETCH-LOGICAL-c640t-f9962228f24bb75053959a68c0d5dc648063480f28adbf579c5e30e11efec31d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6237977/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6237977/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,315,729,782,786,866,887,2104,27509,27931,27932,53798,53800,59150,59151</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30442892$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Yu-Na</creatorcontrib><creatorcontrib>Cheon, Sun-Ha</creatorcontrib><creatorcontrib>Lee, Eun-Kyoung</creatorcontrib><creatorcontrib>Heo, Gyeong-Beom</creatorcontrib><creatorcontrib>Bae, You-Chan</creatorcontrib><creatorcontrib>Joh, Seong-Joon</creatorcontrib><creatorcontrib>Lee, Myoung-Heon</creatorcontrib><creatorcontrib>Lee, Youn-Jeong</creatorcontrib><title>Pathogenesis and genetic characteristics of novel reassortant low-pathogenic avian influenza H7 viruses isolated from migratory birds in the Republic of Korea in the winter of 2016-2017</title><title>Emerging microbes & infections</title><addtitle>Emerg Microbes Infect</addtitle><description>In this study, we characterized H7 subtype low-pathogenicity (LP) influenza A viruses (IAVs) isolated from wild bird habitats in the Republic of Korea from 2010 to early 2017. Through national surveillance, 104 H7 IAVs were isolated, accounting for an average of 14.9% of annual IAV isolations. In early 2017, H7 subtypes accounted for an unusually high prevalence (43.6%) of IAV detections in wild birds. Phylogenetic analysis revealed that all the viruses isolated in the winter of 2016-2017 fell within cluster II of group C, belonging to the Eurasian lineage of H7 IAVs. Notably, cluster II of group C included the H7 gene from the highly pathogenic H7N7 IAV that was detected in northeastern Italy in April of 2016. Through a gene-constellation analysis, the H7 LPIAVs that we isolated constituted ≥11 distinct genotypes. Because the viruses belonging to the genotypes G2.1 and G1 were observed most frequently, we compared the replication and transmission of representative viruses to these genotypes in specific-pathogen-free chickens. Notably, the representative G2.1 strain was capable of systemic replication and efficient transmission in chickens (as evidenced by virus isolation and histopathological examination) without any clinical signs except mortality (in one infected chicken). The efficient subclinical viral replication and shedding of the G2.1 virus in chickens may facilitate its silent spread among poultry after introduction. Given that wild birds harbor novel strains that could affect poultry, our results highlight the need for enhanced IAV surveillance in both wild birds and poultry in Eurasia.</description><subject>Animal Migration</subject><subject>Animals</subject><subject>Animals, Wild - virology</subject><subject>Birds - virology</subject><subject>Chickens</subject><subject>Cold Temperature</subject><subject>Genotype</subject><subject>Influenza</subject><subject>Influenza A Virus, H7N7 Subtype - genetics</subject><subject>Influenza A Virus, H7N7 Subtype - pathogenicity</subject><subject>Influenza in Birds - epidemiology</subject><subject>Phylogeny</subject><subject>Poultry</subject><subject>Reassortant Viruses - genetics</subject><subject>Reassortant Viruses - pathogenicity</subject><subject>Republic of Korea - epidemiology</subject><subject>Seasons</subject><subject>Surveillance</subject><subject>Virus Replication</subject><subject>Viruses</subject><issn>2222-1751</issn><issn>2222-1751</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>DOA</sourceid><recordid>eNp9Um1rFDEQXkSxpfYH-EUCfvHLal52s7sggpRqiwVF9HOYzSZ3OfaSM8necf4z_52z3rW0goZkksw880wyPEXxnNHXjIr2TapYxWVJWTsvVopHxSnHUbKmZo_vnU-K85RWFEdDJSY9LU4ErSredvy0-PUF8jIsjDfJJQJ-IPM5O030EiLobKJLeE0kWOLD1owkGkgpxAw-kzHsys2RAXNg68AT5-04Gf8TyFVDti5OySTiUhghm4HYGNZk7RYRcoh70rs4YNSTvDTkq9lM_YhEWOxTwEK3gZ3z-JLZzSmTJZrmWfHEwpjM-XE_K75_uPx2cVXefP54ffH-ptSyorm0XSexE63lVd83Na1FV3cgW02HekBIS6VAY3kLQ2_rptO1EdQwZqzRgg3irLg-8A4BVmoT3RriXgVw6o8jxIWCiB0ajQLettBwXcueVu1gO9nZqoaBC4nupkeudwcu_ObaDNr4HGF8QPow4t1SLcJWSS6armmQ4NWRIIYfk0lZrV3SZhzBmzAlxZmoGe-6doa-_Au6ClP02CrFayap7HD-F8WEaEXVSIEodkDpGFKKxt49mVE1q1Ed1KhQifNias55cf-vdxm32kPA2wMA9RLiGnYhjoPKsB9DtBG8dkmJf_P_Bu9a7zg</recordid><startdate>20181115</startdate><enddate>20181115</enddate><creator>Lee, Yu-Na</creator><creator>Cheon, Sun-Ha</creator><creator>Lee, Eun-Kyoung</creator><creator>Heo, Gyeong-Beom</creator><creator>Bae, You-Chan</creator><creator>Joh, Seong-Joon</creator><creator>Lee, Myoung-Heon</creator><creator>Lee, Youn-Jeong</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Nature Publishing Group UK</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20181115</creationdate><title>Pathogenesis and genetic characteristics of novel reassortant low-pathogenic avian influenza H7 viruses isolated from migratory birds in the Republic of Korea in the winter of 2016-2017</title><author>Lee, Yu-Na ; Cheon, Sun-Ha ; Lee, Eun-Kyoung ; Heo, Gyeong-Beom ; Bae, You-Chan ; Joh, Seong-Joon ; Lee, Myoung-Heon ; Lee, Youn-Jeong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c640t-f9962228f24bb75053959a68c0d5dc648063480f28adbf579c5e30e11efec31d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Animal Migration</topic><topic>Animals</topic><topic>Animals, Wild - virology</topic><topic>Birds - virology</topic><topic>Chickens</topic><topic>Cold Temperature</topic><topic>Genotype</topic><topic>Influenza</topic><topic>Influenza A Virus, H7N7 Subtype - genetics</topic><topic>Influenza A Virus, H7N7 Subtype - pathogenicity</topic><topic>Influenza in Birds - epidemiology</topic><topic>Phylogeny</topic><topic>Poultry</topic><topic>Reassortant Viruses - genetics</topic><topic>Reassortant Viruses - pathogenicity</topic><topic>Republic of Korea - epidemiology</topic><topic>Seasons</topic><topic>Surveillance</topic><topic>Virus Replication</topic><topic>Viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Yu-Na</creatorcontrib><creatorcontrib>Cheon, Sun-Ha</creatorcontrib><creatorcontrib>Lee, Eun-Kyoung</creatorcontrib><creatorcontrib>Heo, Gyeong-Beom</creatorcontrib><creatorcontrib>Bae, You-Chan</creatorcontrib><creatorcontrib>Joh, Seong-Joon</creatorcontrib><creatorcontrib>Lee, Myoung-Heon</creatorcontrib><creatorcontrib>Lee, Youn-Jeong</creatorcontrib><collection>Access via Taylor & Francis (Open Access Collection)</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Access via ProQuest (Open Access)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Emerging microbes & infections</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Yu-Na</au><au>Cheon, Sun-Ha</au><au>Lee, Eun-Kyoung</au><au>Heo, Gyeong-Beom</au><au>Bae, You-Chan</au><au>Joh, Seong-Joon</au><au>Lee, Myoung-Heon</au><au>Lee, Youn-Jeong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pathogenesis and genetic characteristics of novel reassortant low-pathogenic avian influenza H7 viruses isolated from migratory birds in the Republic of Korea in the winter of 2016-2017</atitle><jtitle>Emerging microbes & infections</jtitle><addtitle>Emerg Microbes Infect</addtitle><date>2018-11-15</date><risdate>2018</risdate><volume>7</volume><issue>1</issue><spage>1</spage><epage>13</epage><pages>1-13</pages><issn>2222-1751</issn><eissn>2222-1751</eissn><abstract>In this study, we characterized H7 subtype low-pathogenicity (LP) influenza A viruses (IAVs) isolated from wild bird habitats in the Republic of Korea from 2010 to early 2017. Through national surveillance, 104 H7 IAVs were isolated, accounting for an average of 14.9% of annual IAV isolations. In early 2017, H7 subtypes accounted for an unusually high prevalence (43.6%) of IAV detections in wild birds. Phylogenetic analysis revealed that all the viruses isolated in the winter of 2016-2017 fell within cluster II of group C, belonging to the Eurasian lineage of H7 IAVs. Notably, cluster II of group C included the H7 gene from the highly pathogenic H7N7 IAV that was detected in northeastern Italy in April of 2016. Through a gene-constellation analysis, the H7 LPIAVs that we isolated constituted ≥11 distinct genotypes. Because the viruses belonging to the genotypes G2.1 and G1 were observed most frequently, we compared the replication and transmission of representative viruses to these genotypes in specific-pathogen-free chickens. Notably, the representative G2.1 strain was capable of systemic replication and efficient transmission in chickens (as evidenced by virus isolation and histopathological examination) without any clinical signs except mortality (in one infected chicken). The efficient subclinical viral replication and shedding of the G2.1 virus in chickens may facilitate its silent spread among poultry after introduction. Given that wild birds harbor novel strains that could affect poultry, our results highlight the need for enhanced IAV surveillance in both wild birds and poultry in Eurasia.</abstract><cop>United States</cop><pub>Taylor & Francis</pub><pmid>30442892</pmid><doi>10.1038/s41426-018-0181-3</doi><tpages>13</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animal Migration Animals Animals, Wild - virology Birds - virology Chickens Cold Temperature Genotype Influenza Influenza A Virus, H7N7 Subtype - genetics Influenza A Virus, H7N7 Subtype - pathogenicity Influenza in Birds - epidemiology Phylogeny Poultry Reassortant Viruses - genetics Reassortant Viruses - pathogenicity Republic of Korea - epidemiology Seasons Surveillance Virus Replication Viruses |
title | Pathogenesis and genetic characteristics of novel reassortant low-pathogenic avian influenza H7 viruses isolated from migratory birds in the Republic of Korea in the winter of 2016-2017 |
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