Effects of particulate matter exposure on blood 5-hydroxymethylation: results from the Beijing truck driver air pollution study
Previous studies have reported epigenetic changes induced by environmental exposures. However, previous investigations did not distinguish 5-methylcytosine (5mC) from a similar oxidative form with opposite functions, 5-hydroxymethylcytosine (5hmC). Here, we measured blood DNA global 5mC and 5hmC by...
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creator | Sanchez-Guerra, Marco Zheng, Yinan Osorio-Yanez, Citlalli Zhong, Jia Chervona, Yana Wang, Sheng Chang, Dou McCracken, John P Díaz, Anaite Bertazzi, Pier Alberto Koutrakis, Petros Kang, Choong-Min Zhang, Xiao Zhang, Wei Byun, Hyang-Min Schwartz, Joel Hou, Lifang Baccarelli, Andrea A |
description | Previous studies have reported epigenetic changes induced by environmental exposures. However, previous investigations did not distinguish 5-methylcytosine (5mC) from a similar oxidative form with opposite functions, 5-hydroxymethylcytosine (5hmC). Here, we measured blood DNA global 5mC and 5hmC by ELISA and used adjusted mixed-effects regression models to evaluate the effects of ambient PM
10
and personal PM
2.5
and its elemental components-black carbon (BC), aluminum (Al), calcium (Ca), potassium (K), iron (Fe), sulfur (S), silicon (Si), titanium (Ti), and zinc (Zn)-on blood global 5mC and 5hmC levels. The study was conducted in 60 truck drivers and 60 office workers in Beijing, China from The Beijing Truck Driver Air Pollution Study at 2 exams separated by one to 2 weeks. Blood 5hmC level (0.08%) was ∼83-fold lower than 5mC (6.61%). An inter-quartile range (IQR) increase in same-day PM
10
was associated with increases in 5hmC of 26.1% in office workers (P = 0.004), 20.2% in truck drivers (P = 0.014), and 21.9% in all participants combined (P < 0.001). PM
10
effects on 5hmC were increasingly stronger when averaged over 4, 7, and 14 d preceding assessment (up to 132.6% for the 14-d average in all participants, P < 0.001). PM
10
effects were also significant after controlling for multiple testing (family-wise error rate; FWER < 0.05). 5hmC was not correlated with personal measures of PM
2.5
and elemental components (FWER > 0.05). 5mC showed no correlations with PM
10
, PM
2.5
, and elemental components measures (FWER > 0.05). Our study suggests that exposure to ambient PM
10
affects 5hmC over time, but not 5mC. This finding demonstrates the need to differentiate 5hmC and 5mC in environmental studies of DNA methylation. |
doi_str_mv | 10.1080/15592294.2015.1050174 |
format | Article |
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10
and personal PM
2.5
and its elemental components-black carbon (BC), aluminum (Al), calcium (Ca), potassium (K), iron (Fe), sulfur (S), silicon (Si), titanium (Ti), and zinc (Zn)-on blood global 5mC and 5hmC levels. The study was conducted in 60 truck drivers and 60 office workers in Beijing, China from The Beijing Truck Driver Air Pollution Study at 2 exams separated by one to 2 weeks. Blood 5hmC level (0.08%) was ∼83-fold lower than 5mC (6.61%). An inter-quartile range (IQR) increase in same-day PM
10
was associated with increases in 5hmC of 26.1% in office workers (P = 0.004), 20.2% in truck drivers (P = 0.014), and 21.9% in all participants combined (P < 0.001). PM
10
effects on 5hmC were increasingly stronger when averaged over 4, 7, and 14 d preceding assessment (up to 132.6% for the 14-d average in all participants, P < 0.001). PM
10
effects were also significant after controlling for multiple testing (family-wise error rate; FWER < 0.05). 5hmC was not correlated with personal measures of PM
2.5
and elemental components (FWER > 0.05). 5mC showed no correlations with PM
10
, PM
2.5
, and elemental components measures (FWER > 0.05). Our study suggests that exposure to ambient PM
10
affects 5hmC over time, but not 5mC. This finding demonstrates the need to differentiate 5hmC and 5mC in environmental studies of DNA methylation.</description><identifier>ISSN: 1559-2294</identifier><identifier>EISSN: 1559-2308</identifier><identifier>DOI: 10.1080/15592294.2015.1050174</identifier><identifier>PMID: 25970091</identifier><language>eng</language><publisher>United States: Taylor & Francis</publisher><subject>5-hydroxymethylcytosine ; 5-methylcytosine ; 5-Methylcytosine - blood ; Adolescent ; Adult ; Air Pollution - adverse effects ; Beijing ; Cytosine - analogs & derivatives ; Cytosine - blood ; DNA methylation ; Environmental Exposure - adverse effects ; Epigenetics ; Female ; Humans ; Male ; Middle Aged ; Particulate Matter ; Particulate Matter - chemistry ; Particulate Matter - metabolism ; Particulate Matter - toxicity ; Research Paper ; Young Adult</subject><ispartof>Epigenetics, 2015-07, Vol.10 (7), p.633-642</ispartof><rights>2015 The Author(s). Published with license by Taylor & Francis Group, LLC © Marco Sanchez-Guerra, Yinan Zheng, Citlalli Osorio-Yanez, Jia Zhong, Yana Chervona, Sheng Wang, Dou Chang, John P McCracken, Anaite Díaz, Pier Alberto Bertazzi, Petros Koutrakis, Choong-Min Kang, Xiao Zhang, Wei Zhang, Hyang-Min Byun, Joel Schwartz, Lifang Hou, and Andrea A Baccarelli 2015</rights><rights>2015 The Author(s). Published with license by Taylor & Francis Group, LLC © Marco Sanchez-Guerra, Yinan Zheng, Citlalli Osorio-Yanez, Jia Zhong, Yana Chervona, Sheng Wang, Dou Chang, John P McCracken, Anaite Díaz, Pier Alberto Bertazzi, Petros Koutrakis, Choong-Min Kang, Xiao Zhang, Wei Zhang, Hyang-Min Byun, Joel Schwartz, Lifang Hou, and Andrea A Baccarelli 2015 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c534t-8843be5324824a8b163646160d60b236de2d74c311185ad520efd05d9fd1fc6b3</citedby><cites>FETCH-LOGICAL-c534t-8843be5324824a8b163646160d60b236de2d74c311185ad520efd05d9fd1fc6b3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623004/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4623004/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25970091$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sanchez-Guerra, Marco</creatorcontrib><creatorcontrib>Zheng, Yinan</creatorcontrib><creatorcontrib>Osorio-Yanez, Citlalli</creatorcontrib><creatorcontrib>Zhong, Jia</creatorcontrib><creatorcontrib>Chervona, Yana</creatorcontrib><creatorcontrib>Wang, Sheng</creatorcontrib><creatorcontrib>Chang, Dou</creatorcontrib><creatorcontrib>McCracken, John P</creatorcontrib><creatorcontrib>Díaz, Anaite</creatorcontrib><creatorcontrib>Bertazzi, Pier Alberto</creatorcontrib><creatorcontrib>Koutrakis, Petros</creatorcontrib><creatorcontrib>Kang, Choong-Min</creatorcontrib><creatorcontrib>Zhang, Xiao</creatorcontrib><creatorcontrib>Zhang, Wei</creatorcontrib><creatorcontrib>Byun, Hyang-Min</creatorcontrib><creatorcontrib>Schwartz, Joel</creatorcontrib><creatorcontrib>Hou, Lifang</creatorcontrib><creatorcontrib>Baccarelli, Andrea A</creatorcontrib><title>Effects of particulate matter exposure on blood 5-hydroxymethylation: results from the Beijing truck driver air pollution study</title><title>Epigenetics</title><addtitle>Epigenetics</addtitle><description>Previous studies have reported epigenetic changes induced by environmental exposures. However, previous investigations did not distinguish 5-methylcytosine (5mC) from a similar oxidative form with opposite functions, 5-hydroxymethylcytosine (5hmC). Here, we measured blood DNA global 5mC and 5hmC by ELISA and used adjusted mixed-effects regression models to evaluate the effects of ambient PM
10
and personal PM
2.5
and its elemental components-black carbon (BC), aluminum (Al), calcium (Ca), potassium (K), iron (Fe), sulfur (S), silicon (Si), titanium (Ti), and zinc (Zn)-on blood global 5mC and 5hmC levels. The study was conducted in 60 truck drivers and 60 office workers in Beijing, China from The Beijing Truck Driver Air Pollution Study at 2 exams separated by one to 2 weeks. Blood 5hmC level (0.08%) was ∼83-fold lower than 5mC (6.61%). An inter-quartile range (IQR) increase in same-day PM
10
was associated with increases in 5hmC of 26.1% in office workers (P = 0.004), 20.2% in truck drivers (P = 0.014), and 21.9% in all participants combined (P < 0.001). PM
10
effects on 5hmC were increasingly stronger when averaged over 4, 7, and 14 d preceding assessment (up to 132.6% for the 14-d average in all participants, P < 0.001). PM
10
effects were also significant after controlling for multiple testing (family-wise error rate; FWER < 0.05). 5hmC was not correlated with personal measures of PM
2.5
and elemental components (FWER > 0.05). 5mC showed no correlations with PM
10
, PM
2.5
, and elemental components measures (FWER > 0.05). Our study suggests that exposure to ambient PM
10
affects 5hmC over time, but not 5mC. This finding demonstrates the need to differentiate 5hmC and 5mC in environmental studies of DNA methylation.</description><subject>5-hydroxymethylcytosine</subject><subject>5-methylcytosine</subject><subject>5-Methylcytosine - blood</subject><subject>Adolescent</subject><subject>Adult</subject><subject>Air Pollution - adverse effects</subject><subject>Beijing</subject><subject>Cytosine - analogs & derivatives</subject><subject>Cytosine - blood</subject><subject>DNA methylation</subject><subject>Environmental Exposure - adverse effects</subject><subject>Epigenetics</subject><subject>Female</subject><subject>Humans</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Particulate Matter</subject><subject>Particulate Matter - chemistry</subject><subject>Particulate Matter - metabolism</subject><subject>Particulate Matter - toxicity</subject><subject>Research Paper</subject><subject>Young Adult</subject><issn>1559-2294</issn><issn>1559-2308</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>EIF</sourceid><recordid>eNp9kUtv1DAUhS1ERduBnwDykk2K35OwQJSqBaRK3ZS15fjRcXHiYDulWfHX8WhmKth0da-uv3OudQ8AbzE6w6hFHzDnHSEdOyMI8zriCK_ZC3CynTeEovbloa_QMTjN-R4hRkXXvQLHhHdrhDp8Av5cOmd1yTA6OKlUvJ6DKhYOqhSboH2cYp6ThXGEfYjRQN5sFpPi4zLYslkq6-P4ESab51BdXIoDLBsLv1h_78c7WNKsf0KT_EN1Uz7BKYYwb0Uwl9ksr8GRUyHbN_u6Aj-uLm8vvjXXN1-_X5xfN5pTVpq2ZbS3nBLWEqbaHgsqmMACGYF6QoWxxKyZphjjlivDCbLOIG46Z7DToqcr8GnnO839YI22Y0kqyCn5QaVFRuXl_y-j38i7-CCZqMesh1uB93uDFH_NNhc5-KxtCGq0cc4Siw7zjlPaVpTvUJ1izsm6pzUYyW148hCe3IYn9-FV3bt___ikOqRVgc87wI8upkH9jikYWdQSYnJJjdpnSZ_f8RcaDKyN</recordid><startdate>20150703</startdate><enddate>20150703</enddate><creator>Sanchez-Guerra, Marco</creator><creator>Zheng, Yinan</creator><creator>Osorio-Yanez, Citlalli</creator><creator>Zhong, Jia</creator><creator>Chervona, Yana</creator><creator>Wang, Sheng</creator><creator>Chang, Dou</creator><creator>McCracken, John P</creator><creator>Díaz, Anaite</creator><creator>Bertazzi, Pier Alberto</creator><creator>Koutrakis, Petros</creator><creator>Kang, Choong-Min</creator><creator>Zhang, Xiao</creator><creator>Zhang, Wei</creator><creator>Byun, Hyang-Min</creator><creator>Schwartz, Joel</creator><creator>Hou, Lifang</creator><creator>Baccarelli, Andrea A</creator><general>Taylor & Francis</general><scope>0YH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20150703</creationdate><title>Effects of particulate matter exposure on blood 5-hydroxymethylation: results from the Beijing truck driver air pollution study</title><author>Sanchez-Guerra, Marco ; Zheng, Yinan ; Osorio-Yanez, Citlalli ; Zhong, Jia ; Chervona, Yana ; Wang, Sheng ; Chang, Dou ; McCracken, John P ; Díaz, Anaite ; Bertazzi, Pier Alberto ; Koutrakis, Petros ; Kang, Choong-Min ; Zhang, Xiao ; Zhang, Wei ; Byun, Hyang-Min ; Schwartz, Joel ; Hou, Lifang ; Baccarelli, Andrea A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c534t-8843be5324824a8b163646160d60b236de2d74c311185ad520efd05d9fd1fc6b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>5-hydroxymethylcytosine</topic><topic>5-methylcytosine</topic><topic>5-Methylcytosine - blood</topic><topic>Adolescent</topic><topic>Adult</topic><topic>Air Pollution - adverse effects</topic><topic>Beijing</topic><topic>Cytosine - analogs & derivatives</topic><topic>Cytosine - blood</topic><topic>DNA methylation</topic><topic>Environmental Exposure - adverse effects</topic><topic>Epigenetics</topic><topic>Female</topic><topic>Humans</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Particulate Matter</topic><topic>Particulate Matter - chemistry</topic><topic>Particulate Matter - metabolism</topic><topic>Particulate Matter - toxicity</topic><topic>Research Paper</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sanchez-Guerra, Marco</creatorcontrib><creatorcontrib>Zheng, Yinan</creatorcontrib><creatorcontrib>Osorio-Yanez, Citlalli</creatorcontrib><creatorcontrib>Zhong, Jia</creatorcontrib><creatorcontrib>Chervona, Yana</creatorcontrib><creatorcontrib>Wang, Sheng</creatorcontrib><creatorcontrib>Chang, Dou</creatorcontrib><creatorcontrib>McCracken, John P</creatorcontrib><creatorcontrib>Díaz, Anaite</creatorcontrib><creatorcontrib>Bertazzi, Pier Alberto</creatorcontrib><creatorcontrib>Koutrakis, Petros</creatorcontrib><creatorcontrib>Kang, Choong-Min</creatorcontrib><creatorcontrib>Zhang, Xiao</creatorcontrib><creatorcontrib>Zhang, Wei</creatorcontrib><creatorcontrib>Byun, Hyang-Min</creatorcontrib><creatorcontrib>Schwartz, Joel</creatorcontrib><creatorcontrib>Hou, Lifang</creatorcontrib><creatorcontrib>Baccarelli, Andrea A</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Epigenetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sanchez-Guerra, Marco</au><au>Zheng, Yinan</au><au>Osorio-Yanez, Citlalli</au><au>Zhong, Jia</au><au>Chervona, Yana</au><au>Wang, Sheng</au><au>Chang, Dou</au><au>McCracken, John P</au><au>Díaz, Anaite</au><au>Bertazzi, Pier Alberto</au><au>Koutrakis, Petros</au><au>Kang, Choong-Min</au><au>Zhang, Xiao</au><au>Zhang, Wei</au><au>Byun, Hyang-Min</au><au>Schwartz, Joel</au><au>Hou, Lifang</au><au>Baccarelli, Andrea A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Effects of particulate matter exposure on blood 5-hydroxymethylation: results from the Beijing truck driver air pollution study</atitle><jtitle>Epigenetics</jtitle><addtitle>Epigenetics</addtitle><date>2015-07-03</date><risdate>2015</risdate><volume>10</volume><issue>7</issue><spage>633</spage><epage>642</epage><pages>633-642</pages><issn>1559-2294</issn><eissn>1559-2308</eissn><abstract>Previous studies have reported epigenetic changes induced by environmental exposures. However, previous investigations did not distinguish 5-methylcytosine (5mC) from a similar oxidative form with opposite functions, 5-hydroxymethylcytosine (5hmC). Here, we measured blood DNA global 5mC and 5hmC by ELISA and used adjusted mixed-effects regression models to evaluate the effects of ambient PM
10
and personal PM
2.5
and its elemental components-black carbon (BC), aluminum (Al), calcium (Ca), potassium (K), iron (Fe), sulfur (S), silicon (Si), titanium (Ti), and zinc (Zn)-on blood global 5mC and 5hmC levels. The study was conducted in 60 truck drivers and 60 office workers in Beijing, China from The Beijing Truck Driver Air Pollution Study at 2 exams separated by one to 2 weeks. Blood 5hmC level (0.08%) was ∼83-fold lower than 5mC (6.61%). An inter-quartile range (IQR) increase in same-day PM
10
was associated with increases in 5hmC of 26.1% in office workers (P = 0.004), 20.2% in truck drivers (P = 0.014), and 21.9% in all participants combined (P < 0.001). PM
10
effects on 5hmC were increasingly stronger when averaged over 4, 7, and 14 d preceding assessment (up to 132.6% for the 14-d average in all participants, P < 0.001). PM
10
effects were also significant after controlling for multiple testing (family-wise error rate; FWER < 0.05). 5hmC was not correlated with personal measures of PM
2.5
and elemental components (FWER > 0.05). 5mC showed no correlations with PM
10
, PM
2.5
, and elemental components measures (FWER > 0.05). Our study suggests that exposure to ambient PM
10
affects 5hmC over time, but not 5mC. This finding demonstrates the need to differentiate 5hmC and 5mC in environmental studies of DNA methylation.</abstract><cop>United States</cop><pub>Taylor & Francis</pub><pmid>25970091</pmid><doi>10.1080/15592294.2015.1050174</doi><tpages>10</tpages><oa>free_for_read</oa></addata></record> |
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subjects | 5-hydroxymethylcytosine 5-methylcytosine 5-Methylcytosine - blood Adolescent Adult Air Pollution - adverse effects Beijing Cytosine - analogs & derivatives Cytosine - blood DNA methylation Environmental Exposure - adverse effects Epigenetics Female Humans Male Middle Aged Particulate Matter Particulate Matter - chemistry Particulate Matter - metabolism Particulate Matter - toxicity Research Paper Young Adult |
title | Effects of particulate matter exposure on blood 5-hydroxymethylation: results from the Beijing truck driver air pollution study |
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