Assessment of a three-dimensional line-of-response probability density function system matrix for PET
To achieve optimal PET image reconstruction through better system modeling, we developed a system matrix that is based on the probability density function for each line of response (LOR-PDF). The LOR-PDFs are grouped by LOR-to-detector incident angles to form a highly compact system matrix. The syst...
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description | To achieve optimal PET image reconstruction through better system modeling, we developed a system matrix that is based on the probability density function for each line of response (LOR-PDF). The LOR-PDFs are grouped by LOR-to-detector incident angles to form a highly compact system matrix. The system matrix was implemented in the MOLAR list mode reconstruction algorithm for a small animal PET scanner. The impact of LOR-PDF on reconstructed image quality was assessed qualitatively as well as quantitatively in terms of contrast recovery coefficient (CRC) and coefficient of variance (COV), and its performance was compared with a fixed Gaussian (iso-Gaussian) line spread function. The LOR-PDFs of three coincidence signal emitting sources, (1) ideal positron emitter that emits perfect back-to-back γ rays (γγ) in air; (2) fluorine-18 (18F) nuclide in water; and (3) oxygen-15 (15O) nuclide in water, were derived, and assessed with simulated and experimental phantom data. The derived LOR-PDFs showed anisotropic and asymmetric characteristics dependent on LOR-detector angle, coincidence emitting source, and the medium, consistent with common PET physical principles. The comparison of the iso-Gaussian function and LOR-PDF showed that: (1) without positron range and acollinearity effects, the LOR-PDF achieved better or similar trade-offs of contrast recovery and noise for objects of 4 mm radius or larger, and this advantage extended to smaller objects (e.g. 2 mm radius sphere, 0.6 mm radius hot-rods) at higher iteration numbers; and (2) with positron range and acollinearity effects, the iso-Gaussian achieved similar or better resolution recovery depending on the significance of positron range effect. We conclude that the 3D LOR-PDF approach is an effective method to generate an accurate and compact system matrix. However, when used directly in expectation-maximization based list-mode iterative reconstruction algorithms such as MOLAR, its superiority is not clear. For this application, using an iso-Gaussian function in MOLAR is a simple but effective technique for PET reconstruction. |
doi_str_mv | 10.1088/0031-9155/57/21/6827 |
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The LOR-PDFs are grouped by LOR-to-detector incident angles to form a highly compact system matrix. The system matrix was implemented in the MOLAR list mode reconstruction algorithm for a small animal PET scanner. The impact of LOR-PDF on reconstructed image quality was assessed qualitatively as well as quantitatively in terms of contrast recovery coefficient (CRC) and coefficient of variance (COV), and its performance was compared with a fixed Gaussian (iso-Gaussian) line spread function. The LOR-PDFs of three coincidence signal emitting sources, (1) ideal positron emitter that emits perfect back-to-back γ rays (γγ) in air; (2) fluorine-18 (18F) nuclide in water; and (3) oxygen-15 (15O) nuclide in water, were derived, and assessed with simulated and experimental phantom data. The derived LOR-PDFs showed anisotropic and asymmetric characteristics dependent on LOR-detector angle, coincidence emitting source, and the medium, consistent with common PET physical principles. The comparison of the iso-Gaussian function and LOR-PDF showed that: (1) without positron range and acollinearity effects, the LOR-PDF achieved better or similar trade-offs of contrast recovery and noise for objects of 4 mm radius or larger, and this advantage extended to smaller objects (e.g. 2 mm radius sphere, 0.6 mm radius hot-rods) at higher iteration numbers; and (2) with positron range and acollinearity effects, the iso-Gaussian achieved similar or better resolution recovery depending on the significance of positron range effect. We conclude that the 3D LOR-PDF approach is an effective method to generate an accurate and compact system matrix. However, when used directly in expectation-maximization based list-mode iterative reconstruction algorithms such as MOLAR, its superiority is not clear. For this application, using an iso-Gaussian function in MOLAR is a simple but effective technique for PET reconstruction.</description><identifier>ISSN: 0031-9155</identifier><identifier>EISSN: 1361-6560</identifier><identifier>DOI: 10.1088/0031-9155/57/21/6827</identifier><identifier>PMID: 23032702</identifier><identifier>CODEN: PHMBA7</identifier><language>eng</language><publisher>England: IOP Publishing</publisher><subject>Animals ; Imaging, Three-Dimensional - methods ; line-of-response ; Monte Carlo Method ; PET ; Phantoms, Imaging ; Photons ; Positron-Emission Tomography - instrumentation ; Positron-Emission Tomography - methods ; Probability ; probability density function ; Sensitivity and Specificity ; system matrix</subject><ispartof>Physics in medicine & biology, 2012-11, Vol.57 (21), p.6827-6848</ispartof><rights>2012 Institute of Physics and Engineering in Medicine</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c449t-5ea80b51af1d82a5d09ca13142bccea301ec48e5b61c3f9bafd4f38579e85a813</citedby><cites>FETCH-LOGICAL-c449t-5ea80b51af1d82a5d09ca13142bccea301ec48e5b61c3f9bafd4f38579e85a813</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://iopscience.iop.org/article/10.1088/0031-9155/57/21/6827/pdf$$EPDF$$P50$$Giop$$H</linktopdf><link.rule.ids>230,314,780,784,885,27924,27925,53846,53893</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23032702$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yao, Rutao</creatorcontrib><creatorcontrib>Ramachandra, Ranjith M</creatorcontrib><creatorcontrib>Mahajan, Neeraj</creatorcontrib><creatorcontrib>Rathod, Vinay</creatorcontrib><creatorcontrib>Gunasekar, Noel</creatorcontrib><creatorcontrib>Panse, Ashish</creatorcontrib><creatorcontrib>Ma, Tianyu</creatorcontrib><creatorcontrib>Jian, Yiqiang</creatorcontrib><creatorcontrib>Yan, Jianhua</creatorcontrib><creatorcontrib>Carson, Richard E</creatorcontrib><title>Assessment of a three-dimensional line-of-response probability density function system matrix for PET</title><title>Physics in medicine & biology</title><addtitle>PMB</addtitle><addtitle>Phys. Med. Biol</addtitle><description>To achieve optimal PET image reconstruction through better system modeling, we developed a system matrix that is based on the probability density function for each line of response (LOR-PDF). The LOR-PDFs are grouped by LOR-to-detector incident angles to form a highly compact system matrix. The system matrix was implemented in the MOLAR list mode reconstruction algorithm for a small animal PET scanner. The impact of LOR-PDF on reconstructed image quality was assessed qualitatively as well as quantitatively in terms of contrast recovery coefficient (CRC) and coefficient of variance (COV), and its performance was compared with a fixed Gaussian (iso-Gaussian) line spread function. The LOR-PDFs of three coincidence signal emitting sources, (1) ideal positron emitter that emits perfect back-to-back γ rays (γγ) in air; (2) fluorine-18 (18F) nuclide in water; and (3) oxygen-15 (15O) nuclide in water, were derived, and assessed with simulated and experimental phantom data. The derived LOR-PDFs showed anisotropic and asymmetric characteristics dependent on LOR-detector angle, coincidence emitting source, and the medium, consistent with common PET physical principles. The comparison of the iso-Gaussian function and LOR-PDF showed that: (1) without positron range and acollinearity effects, the LOR-PDF achieved better or similar trade-offs of contrast recovery and noise for objects of 4 mm radius or larger, and this advantage extended to smaller objects (e.g. 2 mm radius sphere, 0.6 mm radius hot-rods) at higher iteration numbers; and (2) with positron range and acollinearity effects, the iso-Gaussian achieved similar or better resolution recovery depending on the significance of positron range effect. We conclude that the 3D LOR-PDF approach is an effective method to generate an accurate and compact system matrix. However, when used directly in expectation-maximization based list-mode iterative reconstruction algorithms such as MOLAR, its superiority is not clear. For this application, using an iso-Gaussian function in MOLAR is a simple but effective technique for PET reconstruction.</description><subject>Animals</subject><subject>Imaging, Three-Dimensional - methods</subject><subject>line-of-response</subject><subject>Monte Carlo Method</subject><subject>PET</subject><subject>Phantoms, Imaging</subject><subject>Photons</subject><subject>Positron-Emission Tomography - instrumentation</subject><subject>Positron-Emission Tomography - methods</subject><subject>Probability</subject><subject>probability density function</subject><subject>Sensitivity and Specificity</subject><subject>system matrix</subject><issn>0031-9155</issn><issn>1361-6560</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kctu1TAQhi0Eooe2b4CQl2zC8fiSOBukqioXqVK7KGvLccbUVRIHO0Gct8fRKUewYTXSzDf_XH5C3gL7AEzrPWMCqhaU2qtmz2Ffa968IDsQNVS1qtlLsjshZ-RNzk-MAWguX5MzLpjgDeM7glc5Y84jTguNnlq6PCbEqg8lk0Oc7ECHMGEVfZUwz3HKSOcUO9uFISwH2m9YiX6d3FJ4mg95wZGOdknhF_Ux0fubhwvyytsh4-VzPCffPt08XH-pbu8-f72-uq2clO1SKbSadQqsh15zq3rWOgsCJO-cQysYoJMaVVeDE77trO-lF1o1LWplNYhz8vGoO6_diL0rVyU7mDmF0aaDiTaYfytTeDTf408jZNPWUhSB988CKf5YMS9mDNnhMNgJ45oNAAgOUHNdUHlEXYo5J_SnMcDM5pDZ3m-29xvVGA5mc6i0vft7xVPTH0sKwI5AiLN5imsqHuT_a_4GwB-dkA</recordid><startdate>20121107</startdate><enddate>20121107</enddate><creator>Yao, Rutao</creator><creator>Ramachandra, Ranjith M</creator><creator>Mahajan, Neeraj</creator><creator>Rathod, Vinay</creator><creator>Gunasekar, Noel</creator><creator>Panse, Ashish</creator><creator>Ma, Tianyu</creator><creator>Jian, Yiqiang</creator><creator>Yan, Jianhua</creator><creator>Carson, Richard E</creator><general>IOP Publishing</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20121107</creationdate><title>Assessment of a three-dimensional line-of-response probability density function system matrix for PET</title><author>Yao, Rutao ; Ramachandra, Ranjith M ; Mahajan, Neeraj ; Rathod, Vinay ; Gunasekar, Noel ; Panse, Ashish ; Ma, Tianyu ; Jian, Yiqiang ; Yan, Jianhua ; Carson, Richard E</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c449t-5ea80b51af1d82a5d09ca13142bccea301ec48e5b61c3f9bafd4f38579e85a813</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animals</topic><topic>Imaging, Three-Dimensional - methods</topic><topic>line-of-response</topic><topic>Monte Carlo Method</topic><topic>PET</topic><topic>Phantoms, Imaging</topic><topic>Photons</topic><topic>Positron-Emission Tomography - instrumentation</topic><topic>Positron-Emission Tomography - methods</topic><topic>Probability</topic><topic>probability density function</topic><topic>Sensitivity and Specificity</topic><topic>system matrix</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yao, Rutao</creatorcontrib><creatorcontrib>Ramachandra, Ranjith M</creatorcontrib><creatorcontrib>Mahajan, Neeraj</creatorcontrib><creatorcontrib>Rathod, Vinay</creatorcontrib><creatorcontrib>Gunasekar, Noel</creatorcontrib><creatorcontrib>Panse, Ashish</creatorcontrib><creatorcontrib>Ma, Tianyu</creatorcontrib><creatorcontrib>Jian, Yiqiang</creatorcontrib><creatorcontrib>Yan, Jianhua</creatorcontrib><creatorcontrib>Carson, Richard E</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Physics in medicine & biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yao, Rutao</au><au>Ramachandra, Ranjith M</au><au>Mahajan, Neeraj</au><au>Rathod, Vinay</au><au>Gunasekar, Noel</au><au>Panse, Ashish</au><au>Ma, Tianyu</au><au>Jian, Yiqiang</au><au>Yan, Jianhua</au><au>Carson, Richard E</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessment of a three-dimensional line-of-response probability density function system matrix for PET</atitle><jtitle>Physics in medicine & biology</jtitle><stitle>PMB</stitle><addtitle>Phys. Med. Biol</addtitle><date>2012-11-07</date><risdate>2012</risdate><volume>57</volume><issue>21</issue><spage>6827</spage><epage>6848</epage><pages>6827-6848</pages><issn>0031-9155</issn><eissn>1361-6560</eissn><coden>PHMBA7</coden><abstract>To achieve optimal PET image reconstruction through better system modeling, we developed a system matrix that is based on the probability density function for each line of response (LOR-PDF). The LOR-PDFs are grouped by LOR-to-detector incident angles to form a highly compact system matrix. The system matrix was implemented in the MOLAR list mode reconstruction algorithm for a small animal PET scanner. The impact of LOR-PDF on reconstructed image quality was assessed qualitatively as well as quantitatively in terms of contrast recovery coefficient (CRC) and coefficient of variance (COV), and its performance was compared with a fixed Gaussian (iso-Gaussian) line spread function. The LOR-PDFs of three coincidence signal emitting sources, (1) ideal positron emitter that emits perfect back-to-back γ rays (γγ) in air; (2) fluorine-18 (18F) nuclide in water; and (3) oxygen-15 (15O) nuclide in water, were derived, and assessed with simulated and experimental phantom data. The derived LOR-PDFs showed anisotropic and asymmetric characteristics dependent on LOR-detector angle, coincidence emitting source, and the medium, consistent with common PET physical principles. The comparison of the iso-Gaussian function and LOR-PDF showed that: (1) without positron range and acollinearity effects, the LOR-PDF achieved better or similar trade-offs of contrast recovery and noise for objects of 4 mm radius or larger, and this advantage extended to smaller objects (e.g. 2 mm radius sphere, 0.6 mm radius hot-rods) at higher iteration numbers; and (2) with positron range and acollinearity effects, the iso-Gaussian achieved similar or better resolution recovery depending on the significance of positron range effect. We conclude that the 3D LOR-PDF approach is an effective method to generate an accurate and compact system matrix. However, when used directly in expectation-maximization based list-mode iterative reconstruction algorithms such as MOLAR, its superiority is not clear. For this application, using an iso-Gaussian function in MOLAR is a simple but effective technique for PET reconstruction.</abstract><cop>England</cop><pub>IOP Publishing</pub><pmid>23032702</pmid><doi>10.1088/0031-9155/57/21/6827</doi><tpages>22</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Imaging, Three-Dimensional - methods line-of-response Monte Carlo Method PET Phantoms, Imaging Photons Positron-Emission Tomography - instrumentation Positron-Emission Tomography - methods Probability probability density function Sensitivity and Specificity system matrix |
title | Assessment of a three-dimensional line-of-response probability density function system matrix for PET |
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