EGFR Mutations in Lung Adenocarcinomas: Clinical Testing Experience and Relationship to EGFR Gene Copy Number and Immunohistochemical Expression
Lung adenocarcinomas responsive to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors possess EGFR mutations and often increased EGFR copy number. We prospectively studied 334 clinical cases using polymerase chain reaction-based assays to detect deletions within exon 19 and the L858R...
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creator | Li, Allan R Chitale, Dhananjay Riely, Gregory J Pao, William Miller, Vincent A Zakowski, Maureen F Rusch, Valerie Kris, Mark G Ladanyi, Marc |
description | Lung adenocarcinomas responsive to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors possess EGFR mutations and often increased EGFR copy number. We prospectively studied 334 clinical cases using polymerase chain reaction-based assays to detect deletions within exon 19 and the L858R mutation in exon 21, which together account for approximately 90% of EGFR mutations. Seventy-eight (23%) of these tumors had an EGFR mutation, with 55 (71%) exon 19 deletions and 23 (29%) exon 21 L858R mutations. We were able to compare mutant and normal EGFR alleles and found a preferential amplification of the mutant allele. The association of mutations with EGFR amplification (determined by chromogenic in situ hybridization) and EGFR expression (determined by immunohistochemistry) was further examined in a subset of 60 tumors. EGFR amplification (> or =5 EGFR signals per nucleus) was seen in 15 of 29 (52%) EGFR-mutated tumors but in only five of 31 (6%) non-mutated tumors (P = 0.006). EGFR overexpression was strongly associated with amplification but was statistically independent of EGFR mutation. Most patients with EGFR mutations (17 of 29, 59%) never smoked compared with 13% (four of 31) of patients lacking such mutations (P = 0.0003). The association of amplification with smoking status was marginal and was nonexistent with EGFR expression. Thus, these results indicate that EGFR amplification, preferentially of the mutant allele, often accompanies EGFR mutation, whereas EGFR immunohistochemical staining associates with amplification but cannot predict EGFR mutation status. |
doi_str_mv | 10.2353/jmoldx.2008.070178 |
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We prospectively studied 334 clinical cases using polymerase chain reaction-based assays to detect deletions within exon 19 and the L858R mutation in exon 21, which together account for approximately 90% of EGFR mutations. Seventy-eight (23%) of these tumors had an EGFR mutation, with 55 (71%) exon 19 deletions and 23 (29%) exon 21 L858R mutations. We were able to compare mutant and normal EGFR alleles and found a preferential amplification of the mutant allele. The association of mutations with EGFR amplification (determined by chromogenic in situ hybridization) and EGFR expression (determined by immunohistochemistry) was further examined in a subset of 60 tumors. EGFR amplification (> or =5 EGFR signals per nucleus) was seen in 15 of 29 (52%) EGFR-mutated tumors but in only five of 31 (6%) non-mutated tumors (P = 0.006). EGFR overexpression was strongly associated with amplification but was statistically independent of EGFR mutation. Most patients with EGFR mutations (17 of 29, 59%) never smoked compared with 13% (four of 31) of patients lacking such mutations (P = 0.0003). The association of amplification with smoking status was marginal and was nonexistent with EGFR expression. Thus, these results indicate that EGFR amplification, preferentially of the mutant allele, often accompanies EGFR mutation, whereas EGFR immunohistochemical staining associates with amplification but cannot predict EGFR mutation status.</description><identifier>ISSN: 1525-1578</identifier><identifier>EISSN: 1943-7811</identifier><identifier>DOI: 10.2353/jmoldx.2008.070178</identifier><identifier>PMID: 18403609</identifier><language>eng</language><publisher>United States: ASIP</publisher><subject>Adenocarcinoma - genetics ; Adenocarcinoma - metabolism ; Adenocarcinoma - pathology ; DNA Mutational Analysis ; Gene Amplification ; Genes, erbB-1 ; Humans ; In Situ Hybridization ; Lung Neoplasms - genetics ; Lung Neoplasms - metabolism ; Lung Neoplasms - pathology ; Mutation ; Receptor, Epidermal Growth Factor - genetics ; Receptor, Epidermal Growth Factor - metabolism ; Tissue Array Analysis</subject><ispartof>The Journal of molecular diagnostics : JMD, 2008-05, Vol.10 (3), p.242</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/18403609$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Li, Allan R</creatorcontrib><creatorcontrib>Chitale, Dhananjay</creatorcontrib><creatorcontrib>Riely, Gregory J</creatorcontrib><creatorcontrib>Pao, William</creatorcontrib><creatorcontrib>Miller, Vincent A</creatorcontrib><creatorcontrib>Zakowski, Maureen F</creatorcontrib><creatorcontrib>Rusch, Valerie</creatorcontrib><creatorcontrib>Kris, Mark G</creatorcontrib><creatorcontrib>Ladanyi, Marc</creatorcontrib><title>EGFR Mutations in Lung Adenocarcinomas: Clinical Testing Experience and Relationship to EGFR Gene Copy Number and Immunohistochemical Expression</title><title>The Journal of molecular diagnostics : JMD</title><addtitle>J Mol Diagn</addtitle><description>Lung adenocarcinomas responsive to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors possess EGFR mutations and often increased EGFR copy number. We prospectively studied 334 clinical cases using polymerase chain reaction-based assays to detect deletions within exon 19 and the L858R mutation in exon 21, which together account for approximately 90% of EGFR mutations. Seventy-eight (23%) of these tumors had an EGFR mutation, with 55 (71%) exon 19 deletions and 23 (29%) exon 21 L858R mutations. We were able to compare mutant and normal EGFR alleles and found a preferential amplification of the mutant allele. The association of mutations with EGFR amplification (determined by chromogenic in situ hybridization) and EGFR expression (determined by immunohistochemistry) was further examined in a subset of 60 tumors. EGFR amplification (> or =5 EGFR signals per nucleus) was seen in 15 of 29 (52%) EGFR-mutated tumors but in only five of 31 (6%) non-mutated tumors (P = 0.006). EGFR overexpression was strongly associated with amplification but was statistically independent of EGFR mutation. Most patients with EGFR mutations (17 of 29, 59%) never smoked compared with 13% (four of 31) of patients lacking such mutations (P = 0.0003). The association of amplification with smoking status was marginal and was nonexistent with EGFR expression. Thus, these results indicate that EGFR amplification, preferentially of the mutant allele, often accompanies EGFR mutation, whereas EGFR immunohistochemical staining associates with amplification but cannot predict EGFR mutation status.</description><subject>Adenocarcinoma - genetics</subject><subject>Adenocarcinoma - metabolism</subject><subject>Adenocarcinoma - pathology</subject><subject>DNA Mutational Analysis</subject><subject>Gene Amplification</subject><subject>Genes, erbB-1</subject><subject>Humans</subject><subject>In Situ Hybridization</subject><subject>Lung Neoplasms - genetics</subject><subject>Lung Neoplasms - metabolism</subject><subject>Lung Neoplasms - pathology</subject><subject>Mutation</subject><subject>Receptor, Epidermal Growth Factor - genetics</subject><subject>Receptor, Epidermal Growth Factor - metabolism</subject><subject>Tissue Array Analysis</subject><issn>1525-1578</issn><issn>1943-7811</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2008</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo1kL1OwzAUhS0EolB4AQbkhTHFf7EdtqpqS6UCUtU9cpObxlXsRHEi2rfgkYlaWO45w3e-4SL0RMmE8Zi_Hlxd5ccJI0RPiCJU6St0RxPBI6UpvR56zOKIxkqP0H0IB0KoEJLdohHVgnBJkjv0M18uNvij70xnax-w9Xjd-z2e5uDrzLSZ9bUz4Q3PKuttZiq8hdDZgZgfG2gt-Ayw8TneQHVRlLbBXY3P3iV4wLO6OeHP3u2gPZMr53pflzZ0dVaCO0sHWQshDPsHdFOYKsDjX47RdjHfzt6j9ddyNZuuo1KLJCo00UIlPE5imVOTM8G1ymRBE6pinvFCCmKUkpoxxZU0MgGeFJkajgSQnI_R80Xb9DsHedq01pn2lP5_ZgBeLkBp9-W3bSENzlTVgNP04HJKUp4ywfgvTUp0hQ</recordid><startdate>20080501</startdate><enddate>20080501</enddate><creator>Li, Allan R</creator><creator>Chitale, Dhananjay</creator><creator>Riely, Gregory J</creator><creator>Pao, William</creator><creator>Miller, Vincent A</creator><creator>Zakowski, Maureen F</creator><creator>Rusch, Valerie</creator><creator>Kris, Mark G</creator><creator>Ladanyi, Marc</creator><general>ASIP</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope></search><sort><creationdate>20080501</creationdate><title>EGFR Mutations in Lung Adenocarcinomas: Clinical Testing Experience and Relationship to EGFR Gene Copy Number and Immunohistochemical Expression</title><author>Li, Allan R ; Chitale, Dhananjay ; Riely, Gregory J ; Pao, William ; Miller, Vincent A ; Zakowski, Maureen F ; Rusch, Valerie ; Kris, Mark G ; Ladanyi, Marc</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-h849-f80847935956d1ad24387c6f191753c3f640a7768227376a69e39fc739f6ee633</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2008</creationdate><topic>Adenocarcinoma - genetics</topic><topic>Adenocarcinoma - metabolism</topic><topic>Adenocarcinoma - pathology</topic><topic>DNA Mutational Analysis</topic><topic>Gene Amplification</topic><topic>Genes, erbB-1</topic><topic>Humans</topic><topic>In Situ Hybridization</topic><topic>Lung Neoplasms - genetics</topic><topic>Lung Neoplasms - metabolism</topic><topic>Lung Neoplasms - pathology</topic><topic>Mutation</topic><topic>Receptor, Epidermal Growth Factor - genetics</topic><topic>Receptor, Epidermal Growth Factor - metabolism</topic><topic>Tissue Array Analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Li, Allan R</creatorcontrib><creatorcontrib>Chitale, Dhananjay</creatorcontrib><creatorcontrib>Riely, Gregory J</creatorcontrib><creatorcontrib>Pao, William</creatorcontrib><creatorcontrib>Miller, Vincent A</creatorcontrib><creatorcontrib>Zakowski, Maureen F</creatorcontrib><creatorcontrib>Rusch, Valerie</creatorcontrib><creatorcontrib>Kris, Mark G</creatorcontrib><creatorcontrib>Ladanyi, Marc</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><jtitle>The Journal of molecular diagnostics : JMD</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Li, Allan R</au><au>Chitale, Dhananjay</au><au>Riely, Gregory J</au><au>Pao, William</au><au>Miller, Vincent A</au><au>Zakowski, Maureen F</au><au>Rusch, Valerie</au><au>Kris, Mark G</au><au>Ladanyi, Marc</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>EGFR Mutations in Lung Adenocarcinomas: Clinical Testing Experience and Relationship to EGFR Gene Copy Number and Immunohistochemical Expression</atitle><jtitle>The Journal of molecular diagnostics : JMD</jtitle><addtitle>J Mol Diagn</addtitle><date>2008-05-01</date><risdate>2008</risdate><volume>10</volume><issue>3</issue><spage>242</spage><pages>242-</pages><issn>1525-1578</issn><eissn>1943-7811</eissn><abstract>Lung adenocarcinomas responsive to epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors possess EGFR mutations and often increased EGFR copy number. We prospectively studied 334 clinical cases using polymerase chain reaction-based assays to detect deletions within exon 19 and the L858R mutation in exon 21, which together account for approximately 90% of EGFR mutations. Seventy-eight (23%) of these tumors had an EGFR mutation, with 55 (71%) exon 19 deletions and 23 (29%) exon 21 L858R mutations. We were able to compare mutant and normal EGFR alleles and found a preferential amplification of the mutant allele. The association of mutations with EGFR amplification (determined by chromogenic in situ hybridization) and EGFR expression (determined by immunohistochemistry) was further examined in a subset of 60 tumors. EGFR amplification (> or =5 EGFR signals per nucleus) was seen in 15 of 29 (52%) EGFR-mutated tumors but in only five of 31 (6%) non-mutated tumors (P = 0.006). EGFR overexpression was strongly associated with amplification but was statistically independent of EGFR mutation. Most patients with EGFR mutations (17 of 29, 59%) never smoked compared with 13% (four of 31) of patients lacking such mutations (P = 0.0003). The association of amplification with smoking status was marginal and was nonexistent with EGFR expression. Thus, these results indicate that EGFR amplification, preferentially of the mutant allele, often accompanies EGFR mutation, whereas EGFR immunohistochemical staining associates with amplification but cannot predict EGFR mutation status.</abstract><cop>United States</cop><pub>ASIP</pub><pmid>18403609</pmid><doi>10.2353/jmoldx.2008.070178</doi></addata></record> |
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subjects | Adenocarcinoma - genetics Adenocarcinoma - metabolism Adenocarcinoma - pathology DNA Mutational Analysis Gene Amplification Genes, erbB-1 Humans In Situ Hybridization Lung Neoplasms - genetics Lung Neoplasms - metabolism Lung Neoplasms - pathology Mutation Receptor, Epidermal Growth Factor - genetics Receptor, Epidermal Growth Factor - metabolism Tissue Array Analysis |
title | EGFR Mutations in Lung Adenocarcinomas: Clinical Testing Experience and Relationship to EGFR Gene Copy Number and Immunohistochemical Expression |
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