Genetic Diversity and Quinolone Resistance in Campylobacter jejuni Isolates from Poultry in Senegal
We used the multilocus sequence typing (MLST) method to evaluate the genetic diversity of 46 Campylobacter jejuni isolates from chickens and to determine the link between quinolone resistance and sequence type (ST). There were a total of 16 ST genotypes, and the majority of them belonged to seven cl...
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| Veröffentlicht in: | Applied and Environmental Microbiology 2006-05, Vol.72 (5), p.3309-3313 |
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| creator | Kinana, Alfred Dieudonné Cardinale, Eric Tall, Fatou Bahsoun, Ibrahim Sire, Jean-Marie Garin, Benoit Breurec, Sebastien Boye, Cheikh Saad-Bouh Perrier-Gros-Claude, Jean-David |
| description | We used the multilocus sequence typing (MLST) method to evaluate the genetic diversity of 46 Campylobacter jejuni isolates from chickens and to determine the link between quinolone resistance and sequence type (ST). There were a total of 16 ST genotypes, and the majority of them belonged to seven clonal complexes previously identified by using isolates from human disease. The ST-353 complex was the most common complex, whereas the ST-21, ST-42, ST-52, and ST-257 complexes were less well represented. The resistance phenotype varied for each ST, and the Thr-86-Ile substitution in the GyrA protein was the predominant mechanism of resistance to quinolone. Nine of the 14 isolates having the Thr-86-Ile substitution belonged to the ST-353 complex. MLST showed that the emergence of quinolone resistance is not related to the diffusion of a unique clone and that there is no link between ST genotype and quinolone resistance. Based on silent mutations, different variants of the gyrA gene were shown to exist for the same ST. These data provide useful information for understanding the epidemiology of C. jejuni in Senegal. |
| doi_str_mv | 10.1128/AEM.72.5.3309-3313.2006 |
| format | Article |
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There were a total of 16 ST genotypes, and the majority of them belonged to seven clonal complexes previously identified by using isolates from human disease. The ST-353 complex was the most common complex, whereas the ST-21, ST-42, ST-52, and ST-257 complexes were less well represented. The resistance phenotype varied for each ST, and the Thr-86-Ile substitution in the GyrA protein was the predominant mechanism of resistance to quinolone. Nine of the 14 isolates having the Thr-86-Ile substitution belonged to the ST-353 complex. MLST showed that the emergence of quinolone resistance is not related to the diffusion of a unique clone and that there is no link between ST genotype and quinolone resistance. Based on silent mutations, different variants of the gyrA gene were shown to exist for the same ST. These data provide useful information for understanding the epidemiology of C. jejuni in Senegal.</description><identifier>ISSN: 0099-2240</identifier><identifier>EISSN: 1098-5336</identifier><identifier>DOI: 10.1128/AEM.72.5.3309-3313.2006</identifier><identifier>PMID: 16672471</identifier><identifier>CODEN: AEMIDF</identifier><language>eng</language><publisher>Washington, DC: American Society for Microbiology</publisher><subject>Animals ; Anti-Infective Agents ; Anti-Infective Agents - pharmacology ; Bacteria ; Bacteriology ; Biological and medical sciences ; Campylobacter jejuni ; Campylobacter jejuni - classification ; Campylobacter jejuni - drug effects ; Campylobacter jejuni - genetics ; Campylobacter jejuni - isolation & purification ; chicken carcasses ; chicken meat ; Chickens ; Chickens - microbiology ; Ciprofloxacin ; Ciprofloxacin - pharmacology ; DNA Gyrase ; DNA Gyrase - genetics ; DNA topoisomerase (ATP-hydrolysing) ; drug resistance ; Drug Resistance, Bacterial ; Food Microbiology ; Fundamental and applied biological sciences. Psychology ; genes ; Genetic diversity ; genetic techniques and protocols ; Genetic Variation ; genotype ; gyrA gene ; isolation ; Life Sciences ; Microbial Sensitivity Tests ; Microbiology ; Microbiology and Parasitology ; multilocus sequence typing ; mutants ; Mutation ; Nalidixic Acid ; Nalidixic Acid - pharmacology ; point mutation ; Poultry ; Poultry - microbiology ; Proteins ; quinolines ; Quinolones ; Quinolones - pharmacology ; Senegal ; sequence type genotype</subject><ispartof>Applied and Environmental Microbiology, 2006-05, Vol.72 (5), p.3309-3313</ispartof><rights>2006 INIST-CNRS</rights><rights>Copyright American Society for Microbiology May 2006</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright © 2006, American Society for Microbiology 2006</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c591t-6b0228a9050e6d660e32295f0f4da7ca72ebd9171c58af2d677d6ab06e3699ec3</citedby><cites>FETCH-LOGICAL-c591t-6b0228a9050e6d660e32295f0f4da7ca72ebd9171c58af2d677d6ab06e3699ec3</cites><orcidid>0000-0002-3434-3541 ; 0000-0003-4188-0377</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1472360/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1472360/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,3175,3176,27901,27902,53766,53768</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17771345$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16672471$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://riip.hal.science/pasteur-00624407$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Kinana, Alfred Dieudonné</creatorcontrib><creatorcontrib>Cardinale, Eric</creatorcontrib><creatorcontrib>Tall, Fatou</creatorcontrib><creatorcontrib>Bahsoun, Ibrahim</creatorcontrib><creatorcontrib>Sire, Jean-Marie</creatorcontrib><creatorcontrib>Garin, Benoit</creatorcontrib><creatorcontrib>Breurec, Sebastien</creatorcontrib><creatorcontrib>Boye, Cheikh Saad-Bouh</creatorcontrib><creatorcontrib>Perrier-Gros-Claude, Jean-David</creatorcontrib><title>Genetic Diversity and Quinolone Resistance in Campylobacter jejuni Isolates from Poultry in Senegal</title><title>Applied and Environmental Microbiology</title><addtitle>Appl Environ Microbiol</addtitle><description>We used the multilocus sequence typing (MLST) method to evaluate the genetic diversity of 46 Campylobacter jejuni isolates from chickens and to determine the link between quinolone resistance and sequence type (ST). There were a total of 16 ST genotypes, and the majority of them belonged to seven clonal complexes previously identified by using isolates from human disease. The ST-353 complex was the most common complex, whereas the ST-21, ST-42, ST-52, and ST-257 complexes were less well represented. The resistance phenotype varied for each ST, and the Thr-86-Ile substitution in the GyrA protein was the predominant mechanism of resistance to quinolone. Nine of the 14 isolates having the Thr-86-Ile substitution belonged to the ST-353 complex. MLST showed that the emergence of quinolone resistance is not related to the diffusion of a unique clone and that there is no link between ST genotype and quinolone resistance. Based on silent mutations, different variants of the gyrA gene were shown to exist for the same ST. These data provide useful information for understanding the epidemiology of C. jejuni in Senegal.</description><subject>Animals</subject><subject>Anti-Infective Agents</subject><subject>Anti-Infective Agents - pharmacology</subject><subject>Bacteria</subject><subject>Bacteriology</subject><subject>Biological and medical sciences</subject><subject>Campylobacter jejuni</subject><subject>Campylobacter jejuni - classification</subject><subject>Campylobacter jejuni - drug effects</subject><subject>Campylobacter jejuni - genetics</subject><subject>Campylobacter jejuni - isolation & purification</subject><subject>chicken carcasses</subject><subject>chicken meat</subject><subject>Chickens</subject><subject>Chickens - microbiology</subject><subject>Ciprofloxacin</subject><subject>Ciprofloxacin - pharmacology</subject><subject>DNA Gyrase</subject><subject>DNA Gyrase - genetics</subject><subject>DNA topoisomerase (ATP-hydrolysing)</subject><subject>drug resistance</subject><subject>Drug Resistance, Bacterial</subject><subject>Food Microbiology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>genes</subject><subject>Genetic diversity</subject><subject>genetic techniques and protocols</subject><subject>Genetic Variation</subject><subject>genotype</subject><subject>gyrA gene</subject><subject>isolation</subject><subject>Life Sciences</subject><subject>Microbial Sensitivity Tests</subject><subject>Microbiology</subject><subject>Microbiology and Parasitology</subject><subject>multilocus sequence typing</subject><subject>mutants</subject><subject>Mutation</subject><subject>Nalidixic Acid</subject><subject>Nalidixic Acid - pharmacology</subject><subject>point mutation</subject><subject>Poultry</subject><subject>Poultry - microbiology</subject><subject>Proteins</subject><subject>quinolines</subject><subject>Quinolones</subject><subject>Quinolones - pharmacology</subject><subject>Senegal</subject><subject>sequence type genotype</subject><issn>0099-2240</issn><issn>1098-5336</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkl9v0zAUxSMEYmXwFVhAgreUazux4xekqoxtUhF_xp4t17lpXSVxsZNO_fZzaEVhLzz5wb9zru_xSZILAlNCaPlhdvllKui0mDIGMmOMsCkF4E-SCQFZZgVj_GkyAZAyozSHs-RFCBsAyIGXz5MzwrmguSCTxFxhh7016Se7Qx9sv091V6XfB9u5xnWY_sBgQ687g6nt0rlut_vGLbXp0acb3AydTW-Ca3SPIa29a9Nvbmh6vx_p2-i90s3L5Fmtm4Cvjud5cvf58uf8Olt8vbqZzxaZKSTpM74ESkstoQDkFeeAjFJZ1FDnlRZGC4rLShJBTFHqmlZciIrrJXBkXEo07Dz5ePDdDssWK4Nd73Wjtt622u-V01b9e9PZtVq5nSK5oIxDNMgOButHsuvZQm116HHwKsZM8xzEjkT-_XGgd78GDL1qbTDYNLpDNwTFhWQ5K4v_gnGp36YRfPsI3LjBdzE1RaGQnORMREgcIONdCB7rP28loMZ6qFgPJagq1FgPNdZDjfWIytd_J3TSHfsQgXdHQAejm9rHj7fhxAkRoXxc6M0xKbta31uPSodWaWxPYyNzcWBq7ZRe-ehzd0uBMCAgRM4FewAmUtgW</recordid><startdate>20060501</startdate><enddate>20060501</enddate><creator>Kinana, Alfred Dieudonné</creator><creator>Cardinale, Eric</creator><creator>Tall, Fatou</creator><creator>Bahsoun, Ibrahim</creator><creator>Sire, Jean-Marie</creator><creator>Garin, Benoit</creator><creator>Breurec, Sebastien</creator><creator>Boye, Cheikh Saad-Bouh</creator><creator>Perrier-Gros-Claude, Jean-David</creator><general>American Society for Microbiology</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QO</scope><scope>7SN</scope><scope>7SS</scope><scope>7ST</scope><scope>7T7</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>SOI</scope><scope>7X8</scope><scope>1XC</scope><scope>5PM</scope><orcidid>https://orcid.org/0000-0002-3434-3541</orcidid><orcidid>https://orcid.org/0000-0003-4188-0377</orcidid></search><sort><creationdate>20060501</creationdate><title>Genetic Diversity and Quinolone Resistance in Campylobacter jejuni Isolates from Poultry in Senegal</title><author>Kinana, Alfred Dieudonné ; Cardinale, Eric ; Tall, Fatou ; Bahsoun, Ibrahim ; Sire, Jean-Marie ; Garin, Benoit ; Breurec, Sebastien ; Boye, Cheikh Saad-Bouh ; Perrier-Gros-Claude, Jean-David</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c591t-6b0228a9050e6d660e32295f0f4da7ca72ebd9171c58af2d677d6ab06e3699ec3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Animals</topic><topic>Anti-Infective Agents</topic><topic>Anti-Infective Agents - pharmacology</topic><topic>Bacteria</topic><topic>Bacteriology</topic><topic>Biological and medical sciences</topic><topic>Campylobacter jejuni</topic><topic>Campylobacter jejuni - classification</topic><topic>Campylobacter jejuni - drug effects</topic><topic>Campylobacter jejuni - genetics</topic><topic>Campylobacter jejuni - isolation & purification</topic><topic>chicken carcasses</topic><topic>chicken meat</topic><topic>Chickens</topic><topic>Chickens - microbiology</topic><topic>Ciprofloxacin</topic><topic>Ciprofloxacin - pharmacology</topic><topic>DNA Gyrase</topic><topic>DNA Gyrase - genetics</topic><topic>DNA topoisomerase (ATP-hydrolysing)</topic><topic>drug resistance</topic><topic>Drug Resistance, Bacterial</topic><topic>Food Microbiology</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>genes</topic><topic>Genetic diversity</topic><topic>genetic techniques and protocols</topic><topic>Genetic Variation</topic><topic>genotype</topic><topic>gyrA gene</topic><topic>isolation</topic><topic>Life Sciences</topic><topic>Microbial Sensitivity Tests</topic><topic>Microbiology</topic><topic>Microbiology and Parasitology</topic><topic>multilocus sequence typing</topic><topic>mutants</topic><topic>Mutation</topic><topic>Nalidixic Acid</topic><topic>Nalidixic Acid - pharmacology</topic><topic>point mutation</topic><topic>Poultry</topic><topic>Poultry - microbiology</topic><topic>Proteins</topic><topic>quinolines</topic><topic>Quinolones</topic><topic>Quinolones - pharmacology</topic><topic>Senegal</topic><topic>sequence type genotype</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kinana, Alfred Dieudonné</creatorcontrib><creatorcontrib>Cardinale, Eric</creatorcontrib><creatorcontrib>Tall, Fatou</creatorcontrib><creatorcontrib>Bahsoun, Ibrahim</creatorcontrib><creatorcontrib>Sire, Jean-Marie</creatorcontrib><creatorcontrib>Garin, Benoit</creatorcontrib><creatorcontrib>Breurec, Sebastien</creatorcontrib><creatorcontrib>Boye, Cheikh Saad-Bouh</creatorcontrib><creatorcontrib>Perrier-Gros-Claude, Jean-David</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Biotechnology Research Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Applied and Environmental Microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kinana, Alfred Dieudonné</au><au>Cardinale, Eric</au><au>Tall, Fatou</au><au>Bahsoun, Ibrahim</au><au>Sire, Jean-Marie</au><au>Garin, Benoit</au><au>Breurec, Sebastien</au><au>Boye, Cheikh Saad-Bouh</au><au>Perrier-Gros-Claude, Jean-David</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic Diversity and Quinolone Resistance in Campylobacter jejuni Isolates from Poultry in Senegal</atitle><jtitle>Applied and Environmental Microbiology</jtitle><addtitle>Appl Environ Microbiol</addtitle><date>2006-05-01</date><risdate>2006</risdate><volume>72</volume><issue>5</issue><spage>3309</spage><epage>3313</epage><pages>3309-3313</pages><issn>0099-2240</issn><eissn>1098-5336</eissn><coden>AEMIDF</coden><abstract>We used the multilocus sequence typing (MLST) method to evaluate the genetic diversity of 46 Campylobacter jejuni isolates from chickens and to determine the link between quinolone resistance and sequence type (ST). There were a total of 16 ST genotypes, and the majority of them belonged to seven clonal complexes previously identified by using isolates from human disease. The ST-353 complex was the most common complex, whereas the ST-21, ST-42, ST-52, and ST-257 complexes were less well represented. The resistance phenotype varied for each ST, and the Thr-86-Ile substitution in the GyrA protein was the predominant mechanism of resistance to quinolone. Nine of the 14 isolates having the Thr-86-Ile substitution belonged to the ST-353 complex. MLST showed that the emergence of quinolone resistance is not related to the diffusion of a unique clone and that there is no link between ST genotype and quinolone resistance. Based on silent mutations, different variants of the gyrA gene were shown to exist for the same ST. These data provide useful information for understanding the epidemiology of C. jejuni in Senegal.</abstract><cop>Washington, DC</cop><pub>American Society for Microbiology</pub><pmid>16672471</pmid><doi>10.1128/AEM.72.5.3309-3313.2006</doi><tpages>5</tpages><orcidid>https://orcid.org/0000-0002-3434-3541</orcidid><orcidid>https://orcid.org/0000-0003-4188-0377</orcidid><oa>free_for_read</oa></addata></record> |
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| subjects | Animals Anti-Infective Agents Anti-Infective Agents - pharmacology Bacteria Bacteriology Biological and medical sciences Campylobacter jejuni Campylobacter jejuni - classification Campylobacter jejuni - drug effects Campylobacter jejuni - genetics Campylobacter jejuni - isolation & purification chicken carcasses chicken meat Chickens Chickens - microbiology Ciprofloxacin Ciprofloxacin - pharmacology DNA Gyrase DNA Gyrase - genetics DNA topoisomerase (ATP-hydrolysing) drug resistance Drug Resistance, Bacterial Food Microbiology Fundamental and applied biological sciences. Psychology genes Genetic diversity genetic techniques and protocols Genetic Variation genotype gyrA gene isolation Life Sciences Microbial Sensitivity Tests Microbiology Microbiology and Parasitology multilocus sequence typing mutants Mutation Nalidixic Acid Nalidixic Acid - pharmacology point mutation Poultry Poultry - microbiology Proteins quinolines Quinolones Quinolones - pharmacology Senegal sequence type genotype |
| title | Genetic Diversity and Quinolone Resistance in Campylobacter jejuni Isolates from Poultry in Senegal |
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