Co-occurrence of DNA- and RNA-viruses infecting the bloom-forming dinoflagellate, Heterocapsa circularisquama, on the Japan coast
In western Japan, Heterocapsa circularisquama blooms occur almost every year. Two distinct viruses infectious to H. circularisquama, a large double-stranded DNA (dsDNA) virus, 'HcV', and a small single-stranded RNA (ssRNA) virus, 'HcRNAV', were found and characterized. Here we re...
Gespeichert in:
| Veröffentlicht in: | Plankton & benthos research 2009/11/25, Vol.4(4), pp.129-134 |
|---|---|
| Hauptverfasser: | , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 134 |
|---|---|
| container_issue | 4 |
| container_start_page | 129 |
| container_title | Plankton & benthos research |
| container_volume | 4 |
| creator | Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan) Mizumoto, H Takao, Y Nagasaki, K |
| description | In western Japan, Heterocapsa circularisquama blooms occur almost every year. Two distinct viruses infectious to H. circularisquama, a large double-stranded DNA (dsDNA) virus, 'HcV', and a small single-stranded RNA (ssRNA) virus, 'HcRNAV', were found and characterized. Here we report the co-occurrence of the two viruses in Hiroshima Bay, Japan, during 2006. Viruses isolated using H. circularisquama strains HU9433-P and MZ2 (the hosts) were large dsDNA viruses (ca. 0.2 micro m in diameter) that accumulated in the host cytoplasm. Pulsed-field gel electrophoresis analysis showed their genome sizes were ca. 388 kbp, comparable to the previously reported HcV strain. Small ssRNA viruses were also isolated (using the host strain HCLG-1) at ca. 30 nm in diameter and formed crystalline arrays and/or were randomly accumulated in the host cytoplasm, and their partial genome sequences were highly similar to a previously reported HcRNAV strain. This is the first report of the co-occurrence of HcV and HcRNAV in natural water and their successful isolation. The data suggest the two distinct viruses may cooperatively affect the dynamics of H. circularisquama blooms. |
| doi_str_mv | 10.3800/pbr.4.129 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_968185015</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2695819751</sourcerecordid><originalsourceid>FETCH-LOGICAL-c5409-eaa8d5b44d7459f5bd5c306db1b6dd59caf65a819a0e4f4da3aee7f30e63b8b73</originalsourceid><addsrcrecordid>eNpdkU1r3DAQhk1poWnaQ39AQdBDCcQbyZZs-dBD2H6kIaQhtNCbGEujjRZbciS70GP_ebVxyKEzhxmGZ16GeYviLaObWlJ6NvVxwzes6p4VR0zKqmyq9tfzh56WsuLty-JVSntKG9bS-qj4uw1l0HqJEb1GEiz5dH1eEvCG3Obmt4tLwkSct6hn53dkvkPSDyGMpQ1xPEyM88EOsMNhgBlPyQXOGIOGKQHRLuplgOjS_QIjnJLgHxQuYQJPdIA0vy5eWBgSvnmsx8XPL59_bC_Kq-9fv23Pr0otOO1KBJBG9JyblovOit4IXdPG9KxvjBGdBtsIkKwDitxyAzUgtram2NS97Nv6uPiw6k4x3C-YZjW6pA9HewxLUl0jmRSUiUy-_4_chyX6fJxitKqo4IyzTJ2slI4hpYhWTdGNEP9kSB28UNkLxVX2IrMfV3af5vyoJxLi7PSAj-SamX-a6zuICn3ef7fuWwgKdvmd6vKmoozmkFzW_wBCXZ0v</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1022054141</pqid></control><display><type>article</type><title>Co-occurrence of DNA- and RNA-viruses infecting the bloom-forming dinoflagellate, Heterocapsa circularisquama, on the Japan coast</title><source>J-STAGE Free</source><source>EZB-FREE-00999 freely available EZB journals</source><creator>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan) ; Mizumoto, H ; Takao, Y ; Nagasaki, K</creator><creatorcontrib>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan) ; Mizumoto, H ; Takao, Y ; Nagasaki, K</creatorcontrib><description>In western Japan, Heterocapsa circularisquama blooms occur almost every year. Two distinct viruses infectious to H. circularisquama, a large double-stranded DNA (dsDNA) virus, 'HcV', and a small single-stranded RNA (ssRNA) virus, 'HcRNAV', were found and characterized. Here we report the co-occurrence of the two viruses in Hiroshima Bay, Japan, during 2006. Viruses isolated using H. circularisquama strains HU9433-P and MZ2 (the hosts) were large dsDNA viruses (ca. 0.2 micro m in diameter) that accumulated in the host cytoplasm. Pulsed-field gel electrophoresis analysis showed their genome sizes were ca. 388 kbp, comparable to the previously reported HcV strain. Small ssRNA viruses were also isolated (using the host strain HCLG-1) at ca. 30 nm in diameter and formed crystalline arrays and/or were randomly accumulated in the host cytoplasm, and their partial genome sequences were highly similar to a previously reported HcRNAV strain. This is the first report of the co-occurrence of HcV and HcRNAV in natural water and their successful isolation. The data suggest the two distinct viruses may cooperatively affect the dynamics of H. circularisquama blooms.</description><identifier>ISSN: 1880-8247</identifier><identifier>EISSN: 1882-627X</identifier><identifier>DOI: 10.3800/pbr.4.129</identifier><language>eng</language><publisher>Tokyo: The Plankton Society of Japan, The Japanese Association of Benthology</publisher><subject>ADN ; AGUAS COSTERAS ; Algal virus ; ARN ; BIVALVIA ; BIVALVO ; COASTAL WATERS ; dinoflagellate ; DNA ; EAUX COTIERES ; HcRNAV ; HcV ; Hepatitis C virus ; Heterocapsa circularisquama ; http://www.fao.org/aos/agrovoc#c_2347 ; http://www.fao.org/aos/agrovoc#c_25205 ; http://www.fao.org/aos/agrovoc#c_32365 ; http://www.fao.org/aos/agrovoc#c_3852 ; http://www.fao.org/aos/agrovoc#c_4643 ; http://www.fao.org/aos/agrovoc#c_6618 ; http://www.fao.org/aos/agrovoc#c_8262 ; http://www.fao.org/aos/agrovoc#c_942 ; INFECCION ; INFECTION ; Marine ; MASTIGOPHORA ; PLANKTON BLOOMS ; PROLIFERACION DE PLANCTON ; PROLIFERATION PLANCTONIQUE ; RNA ; VIRUS ; VIRUSES</subject><ispartof>Plankton and Benthos Research, 2009/11/25, Vol.4(4), pp.129-134</ispartof><rights>2009 The Plankton Society of Japan, The Japanese Association of Benthology</rights><rights>Copyright The Plankton Society of Japan and The Japanese Society of Benthology 2009</rights><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5409-eaa8d5b44d7459f5bd5c306db1b6dd59caf65a819a0e4f4da3aee7f30e63b8b73</citedby><cites>FETCH-LOGICAL-c5409-eaa8d5b44d7459f5bd5c306db1b6dd59caf65a819a0e4f4da3aee7f30e63b8b73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,1883,4024,27923,27924,27925</link.rule.ids></links><search><creatorcontrib>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan)</creatorcontrib><creatorcontrib>Mizumoto, H</creatorcontrib><creatorcontrib>Takao, Y</creatorcontrib><creatorcontrib>Nagasaki, K</creatorcontrib><title>Co-occurrence of DNA- and RNA-viruses infecting the bloom-forming dinoflagellate, Heterocapsa circularisquama, on the Japan coast</title><title>Plankton & benthos research</title><addtitle>Plankton Benthos Res</addtitle><description>In western Japan, Heterocapsa circularisquama blooms occur almost every year. Two distinct viruses infectious to H. circularisquama, a large double-stranded DNA (dsDNA) virus, 'HcV', and a small single-stranded RNA (ssRNA) virus, 'HcRNAV', were found and characterized. Here we report the co-occurrence of the two viruses in Hiroshima Bay, Japan, during 2006. Viruses isolated using H. circularisquama strains HU9433-P and MZ2 (the hosts) were large dsDNA viruses (ca. 0.2 micro m in diameter) that accumulated in the host cytoplasm. Pulsed-field gel electrophoresis analysis showed their genome sizes were ca. 388 kbp, comparable to the previously reported HcV strain. Small ssRNA viruses were also isolated (using the host strain HCLG-1) at ca. 30 nm in diameter and formed crystalline arrays and/or were randomly accumulated in the host cytoplasm, and their partial genome sequences were highly similar to a previously reported HcRNAV strain. This is the first report of the co-occurrence of HcV and HcRNAV in natural water and their successful isolation. The data suggest the two distinct viruses may cooperatively affect the dynamics of H. circularisquama blooms.</description><subject>ADN</subject><subject>AGUAS COSTERAS</subject><subject>Algal virus</subject><subject>ARN</subject><subject>BIVALVIA</subject><subject>BIVALVO</subject><subject>COASTAL WATERS</subject><subject>dinoflagellate</subject><subject>DNA</subject><subject>EAUX COTIERES</subject><subject>HcRNAV</subject><subject>HcV</subject><subject>Hepatitis C virus</subject><subject>Heterocapsa circularisquama</subject><subject>http://www.fao.org/aos/agrovoc#c_2347</subject><subject>http://www.fao.org/aos/agrovoc#c_25205</subject><subject>http://www.fao.org/aos/agrovoc#c_32365</subject><subject>http://www.fao.org/aos/agrovoc#c_3852</subject><subject>http://www.fao.org/aos/agrovoc#c_4643</subject><subject>http://www.fao.org/aos/agrovoc#c_6618</subject><subject>http://www.fao.org/aos/agrovoc#c_8262</subject><subject>http://www.fao.org/aos/agrovoc#c_942</subject><subject>INFECCION</subject><subject>INFECTION</subject><subject>Marine</subject><subject>MASTIGOPHORA</subject><subject>PLANKTON BLOOMS</subject><subject>PROLIFERACION DE PLANCTON</subject><subject>PROLIFERATION PLANCTONIQUE</subject><subject>RNA</subject><subject>VIRUS</subject><subject>VIRUSES</subject><issn>1880-8247</issn><issn>1882-627X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNpdkU1r3DAQhk1poWnaQ39AQdBDCcQbyZZs-dBD2H6kIaQhtNCbGEujjRZbciS70GP_ebVxyKEzhxmGZ16GeYviLaObWlJ6NvVxwzes6p4VR0zKqmyq9tfzh56WsuLty-JVSntKG9bS-qj4uw1l0HqJEb1GEiz5dH1eEvCG3Obmt4tLwkSct6hn53dkvkPSDyGMpQ1xPEyM88EOsMNhgBlPyQXOGIOGKQHRLuplgOjS_QIjnJLgHxQuYQJPdIA0vy5eWBgSvnmsx8XPL59_bC_Kq-9fv23Pr0otOO1KBJBG9JyblovOit4IXdPG9KxvjBGdBtsIkKwDitxyAzUgtram2NS97Nv6uPiw6k4x3C-YZjW6pA9HewxLUl0jmRSUiUy-_4_chyX6fJxitKqo4IyzTJ2slI4hpYhWTdGNEP9kSB28UNkLxVX2IrMfV3af5vyoJxLi7PSAj-SamX-a6zuICn3ef7fuWwgKdvmd6vKmoozmkFzW_wBCXZ0v</recordid><startdate>2009</startdate><enddate>2009</enddate><creator>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan)</creator><creator>Mizumoto, H</creator><creator>Takao, Y</creator><creator>Nagasaki, K</creator><general>The Plankton Society of Japan, The Japanese Association of Benthology</general><general>The Plankton Society of Japan and The Japanese Society of Benthology</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SN</scope><scope>7TN</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BVBZV</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>GNUQQ</scope><scope>H95</scope><scope>HCIFZ</scope><scope>L.G</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope></search><sort><creationdate>2009</creationdate><title>Co-occurrence of DNA- and RNA-viruses infecting the bloom-forming dinoflagellate, Heterocapsa circularisquama, on the Japan coast</title><author>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan) ; Mizumoto, H ; Takao, Y ; Nagasaki, K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5409-eaa8d5b44d7459f5bd5c306db1b6dd59caf65a819a0e4f4da3aee7f30e63b8b73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>ADN</topic><topic>AGUAS COSTERAS</topic><topic>Algal virus</topic><topic>ARN</topic><topic>BIVALVIA</topic><topic>BIVALVO</topic><topic>COASTAL WATERS</topic><topic>dinoflagellate</topic><topic>DNA</topic><topic>EAUX COTIERES</topic><topic>HcRNAV</topic><topic>HcV</topic><topic>Hepatitis C virus</topic><topic>Heterocapsa circularisquama</topic><topic>http://www.fao.org/aos/agrovoc#c_2347</topic><topic>http://www.fao.org/aos/agrovoc#c_25205</topic><topic>http://www.fao.org/aos/agrovoc#c_32365</topic><topic>http://www.fao.org/aos/agrovoc#c_3852</topic><topic>http://www.fao.org/aos/agrovoc#c_4643</topic><topic>http://www.fao.org/aos/agrovoc#c_6618</topic><topic>http://www.fao.org/aos/agrovoc#c_8262</topic><topic>http://www.fao.org/aos/agrovoc#c_942</topic><topic>INFECCION</topic><topic>INFECTION</topic><topic>Marine</topic><topic>MASTIGOPHORA</topic><topic>PLANKTON BLOOMS</topic><topic>PROLIFERACION DE PLANCTON</topic><topic>PROLIFERATION PLANCTONIQUE</topic><topic>RNA</topic><topic>VIRUS</topic><topic>VIRUSES</topic><toplevel>online_resources</toplevel><creatorcontrib>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan)</creatorcontrib><creatorcontrib>Mizumoto, H</creatorcontrib><creatorcontrib>Takao, Y</creatorcontrib><creatorcontrib>Nagasaki, K</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>Ecology Abstracts</collection><collection>Oceanic Abstracts</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>East & South Asia Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>SciTech Premium Collection</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Environmental Science Collection</collection><jtitle>Plankton & benthos research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tomaru, Y., National Research Inst. of Fisheries and Environment of Inland Sea, Hatsukaichi, Hiroshima (Japan)</au><au>Mizumoto, H</au><au>Takao, Y</au><au>Nagasaki, K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Co-occurrence of DNA- and RNA-viruses infecting the bloom-forming dinoflagellate, Heterocapsa circularisquama, on the Japan coast</atitle><jtitle>Plankton & benthos research</jtitle><addtitle>Plankton Benthos Res</addtitle><date>2009</date><risdate>2009</risdate><volume>4</volume><issue>4</issue><spage>129</spage><epage>134</epage><pages>129-134</pages><issn>1880-8247</issn><eissn>1882-627X</eissn><abstract>In western Japan, Heterocapsa circularisquama blooms occur almost every year. Two distinct viruses infectious to H. circularisquama, a large double-stranded DNA (dsDNA) virus, 'HcV', and a small single-stranded RNA (ssRNA) virus, 'HcRNAV', were found and characterized. Here we report the co-occurrence of the two viruses in Hiroshima Bay, Japan, during 2006. Viruses isolated using H. circularisquama strains HU9433-P and MZ2 (the hosts) were large dsDNA viruses (ca. 0.2 micro m in diameter) that accumulated in the host cytoplasm. Pulsed-field gel electrophoresis analysis showed their genome sizes were ca. 388 kbp, comparable to the previously reported HcV strain. Small ssRNA viruses were also isolated (using the host strain HCLG-1) at ca. 30 nm in diameter and formed crystalline arrays and/or were randomly accumulated in the host cytoplasm, and their partial genome sequences were highly similar to a previously reported HcRNAV strain. This is the first report of the co-occurrence of HcV and HcRNAV in natural water and their successful isolation. The data suggest the two distinct viruses may cooperatively affect the dynamics of H. circularisquama blooms.</abstract><cop>Tokyo</cop><pub>The Plankton Society of Japan, The Japanese Association of Benthology</pub><doi>10.3800/pbr.4.129</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1880-8247 |
| ispartof | Plankton and Benthos Research, 2009/11/25, Vol.4(4), pp.129-134 |
| issn | 1880-8247 1882-627X |
| language | eng |
| recordid | cdi_proquest_miscellaneous_968185015 |
| source | J-STAGE Free; EZB-FREE-00999 freely available EZB journals |
| subjects | ADN AGUAS COSTERAS Algal virus ARN BIVALVIA BIVALVO COASTAL WATERS dinoflagellate DNA EAUX COTIERES HcRNAV HcV Hepatitis C virus Heterocapsa circularisquama http://www.fao.org/aos/agrovoc#c_2347 http://www.fao.org/aos/agrovoc#c_25205 http://www.fao.org/aos/agrovoc#c_32365 http://www.fao.org/aos/agrovoc#c_3852 http://www.fao.org/aos/agrovoc#c_4643 http://www.fao.org/aos/agrovoc#c_6618 http://www.fao.org/aos/agrovoc#c_8262 http://www.fao.org/aos/agrovoc#c_942 INFECCION INFECTION Marine MASTIGOPHORA PLANKTON BLOOMS PROLIFERACION DE PLANCTON PROLIFERATION PLANCTONIQUE RNA VIRUS VIRUSES |
| title | Co-occurrence of DNA- and RNA-viruses infecting the bloom-forming dinoflagellate, Heterocapsa circularisquama, on the Japan coast |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-31T00%3A01%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Co-occurrence%20of%20DNA-%20and%20RNA-viruses%20infecting%20the%20bloom-forming%20dinoflagellate,%20Heterocapsa%20circularisquama,%20on%20the%20Japan%20coast&rft.jtitle=Plankton%20&%20benthos%20research&rft.au=Tomaru,%20Y.,%20National%20Research%20Inst.%20of%20Fisheries%20and%20Environment%20of%20Inland%20Sea,%20Hatsukaichi,%20Hiroshima%20(Japan)&rft.date=2009&rft.volume=4&rft.issue=4&rft.spage=129&rft.epage=134&rft.pages=129-134&rft.issn=1880-8247&rft.eissn=1882-627X&rft_id=info:doi/10.3800/pbr.4.129&rft_dat=%3Cproquest_cross%3E2695819751%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1022054141&rft_id=info:pmid/&rfr_iscdi=true |