Milk microbiome signatures of subclinical mastitis‐affected cattle analysed by shotgun sequencing

Aims: Metagenomic analysis of milk samples collected from Kankrej, Gir (Bos indicus) and crossbred (Bos taurus × B. indicus) cattle harbouring subclinical mastitis was carried out by next‐generation sequencing 454 GS‐FLX technology to elucidate the microbial community structure of cattle milk. Metho...

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Veröffentlicht in:	Journal of applied microbiology 2012-04, Vol.112 (4), p.639-650
Hauptverfasser:	Bhatt, V.D, Ahir, V.B, Koringa, P.G, Jakhesara, S.J, Rank, D.N, Nauriyal, D.S, Kunjadia, A.P, Joshi, C.G
Format:	Artikel
Sprache:	eng
Schlagworte:	Animals Anti-Bacterial Agents - pharmacology Anti-Bacterial Agents - therapeutic use antibiotic resistance Bacillus cereus Bacteria - classification Bacteria - drug effects Bacteria - genetics Bacteria - isolation & purification bacteriophages Biological and medical sciences Bos Bos indicus cadmium Cattle cobalt community structure copper crossbreds Crosses, Genetic dairy cows economics Enterobacter Escherichia coli Female fluoroquinolones Fundamental and applied biological sciences. Psychology High-Throughput Nucleotide Sequencing Klebsiella pneumoniae mastitis Mastitis, Bovine - drug therapy Mastitis, Bovine - genetics Mastitis, Bovine - microbiology metabolomics metagenomics methicillin MG-RAST Microbiology microbiome milk Milk - microbiology milk analysis multiple drug resistance next-generation sequencing nucleotides phylogeny Pseudomonadales Pseudomonas aeruginosa Pseudomonas mendocina Shigella flexneri Staphylococcus aureus Staphylococcus epidermidis subclinical mastitis toxicity Yersinia zebu zinc
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