ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes

The expressed sequence tags (ESTs) of Angiostrongylus cantonensis were analyzed in an attempt to gain further insight into its genomic expression patterns. A total of 1,277 ESTs of A. cantonensis were randomly downloaded from NCBI databank. ESTs were analyzed and annotated using Blastx. The result s...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Parasitology research (1987) 2010-04, Vol.106 (5), p.1027-1032
Hauptverfasser: Fang, Wenzhen, Xu, Shisan, Wang, Yinan, Ni, Fang, Zhang, Shaolei, Liu, Jiang, Chen, Xiaobin, Luo, Damin
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1032
container_issue 5
container_start_page 1027
container_title Parasitology research (1987)
container_volume 106
creator Fang, Wenzhen
Xu, Shisan
Wang, Yinan
Ni, Fang
Zhang, Shaolei
Liu, Jiang
Chen, Xiaobin
Luo, Damin
description The expressed sequence tags (ESTs) of Angiostrongylus cantonensis were analyzed in an attempt to gain further insight into its genomic expression patterns. A total of 1,277 ESTs of A. cantonensis were randomly downloaded from NCBI databank. ESTs were analyzed and annotated using Blastx. The result showed that there were 60 ESTs had no match to any of the proteins and gene sequences in the published databases, and 695 ESTs score more than 80. According to the function, the identified 695 ESTs could be grouped into 13 categories related to metabolism, cellular development, immune evasion, host-parasite interactions, and so on. Among them, 65 (9.4%) were proteases and protease inhibitors, represented 19 potential proteases and protease inhibitors genes; 42 (6.0%) were allergens or antigens, represented 15 potential antigens/allergens genes. SignalP analysis was applied to the 19 putative proteases and protease inhibitors and the 15 antigens/allergens protein sequences to identify the potential signal peptides and anchors. The result demonstrated that there were ten putative proteins had N-terminal signal peptides and three had signal anchors, these putative excretory/secretory proteins might be the products of potential parasitism genes which played an important role in the adaptation of A. cantonensis to a parasitism life. These parasitism genes and proteins identified are expected to become potential targets for future research on anti-A. cantonensis drugs; moreover, the resulting genetic information is useful in elucidating the mechanisms of parasitism of A. cantonensis.
doi_str_mv 10.1007/s00436-010-1751-z
format Article
fullrecord <record><control><sourceid>gale_proqu</sourceid><recordid>TN_cdi_proquest_miscellaneous_968161850</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A305996007</galeid><sourcerecordid>A305996007</sourcerecordid><originalsourceid>FETCH-LOGICAL-c468t-a31be27ed011ed5c72fab261d3dfe1db37302835b768f4d09eafde05879814243</originalsourceid><addsrcrecordid>eNqFkcFu1DAQhi0EotvCA3CBXBCnlBk7jhNuq6oUpEocSs-Wk9jBVdZePMlh-_R4mwVuYB889nz_zMg_Y28QLhFAfSSAStQlIJSoJJaPz9gGK8FLbKV8zjbQ5hgQxRk7J3oAQFVX1Ut2xnOkWmg2TF_fFfsUZ-sDFSaY6UCeiuiKbRh9pDnFMB6mhYrehDkGG3L601ExLP38BM4_bLHPBcLszVTsTTLkZ0-7YrTB0iv2wpmJ7OvTecHuP19_v_pS3n67-Xq1vS37qm7m0gjsLFd2yNPaQfaKO9PxGgcxOItDJ5QA3gjZqbpx1QCtNW6wIBvVNljxSlywD2vdPNrPxdKsd556O00m2LiQbusGa2wk_JdUIi9Z4ZG8XMnRTFb74OKcTJ_3YHe-z5_hfH7fCpBtW2c_sgBXQZ8iUbJO75PfmXTQCPromF4d03C8Z8f0Y9a8PY2zdDs7_FH8tigD70-Aod5MLpnQe_rL8bpq5dO0fOUop8Jok36IS8qO0j-7v1tFzkRtxpQL39_l1gKw4QIViF9QWrgg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>733335410</pqid></control><display><type>article</type><title>ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Fang, Wenzhen ; Xu, Shisan ; Wang, Yinan ; Ni, Fang ; Zhang, Shaolei ; Liu, Jiang ; Chen, Xiaobin ; Luo, Damin</creator><creatorcontrib>Fang, Wenzhen ; Xu, Shisan ; Wang, Yinan ; Ni, Fang ; Zhang, Shaolei ; Liu, Jiang ; Chen, Xiaobin ; Luo, Damin</creatorcontrib><description>The expressed sequence tags (ESTs) of Angiostrongylus cantonensis were analyzed in an attempt to gain further insight into its genomic expression patterns. A total of 1,277 ESTs of A. cantonensis were randomly downloaded from NCBI databank. ESTs were analyzed and annotated using Blastx. The result showed that there were 60 ESTs had no match to any of the proteins and gene sequences in the published databases, and 695 ESTs score more than 80. According to the function, the identified 695 ESTs could be grouped into 13 categories related to metabolism, cellular development, immune evasion, host-parasite interactions, and so on. Among them, 65 (9.4%) were proteases and protease inhibitors, represented 19 potential proteases and protease inhibitors genes; 42 (6.0%) were allergens or antigens, represented 15 potential antigens/allergens genes. SignalP analysis was applied to the 19 putative proteases and protease inhibitors and the 15 antigens/allergens protein sequences to identify the potential signal peptides and anchors. The result demonstrated that there were ten putative proteins had N-terminal signal peptides and three had signal anchors, these putative excretory/secretory proteins might be the products of potential parasitism genes which played an important role in the adaptation of A. cantonensis to a parasitism life. These parasitism genes and proteins identified are expected to become potential targets for future research on anti-A. cantonensis drugs; moreover, the resulting genetic information is useful in elucidating the mechanisms of parasitism of A. cantonensis.</description><identifier>ISSN: 0932-0113</identifier><identifier>EISSN: 1432-1955</identifier><identifier>DOI: 10.1007/s00436-010-1751-z</identifier><identifier>PMID: 20177908</identifier><identifier>CODEN: PARREZ</identifier><language>eng</language><publisher>Berlin/Heidelberg: Berlin/Heidelberg : Springer-Verlag</publisher><subject>Angiostrongylus cantonensis ; Angiostrongylus cantonensis - genetics ; Angiostrongylus cantonensis - pathogenicity ; Animals ; Biological and medical sciences ; Biomedical and Life Sciences ; Biomedicine ; Expressed Sequence Tags ; Fundamental and applied biological sciences. Psychology ; Gene expression ; General aspects ; General aspects and techniques. Study of several systematic groups. Models ; Genetic aspects ; Health aspects ; Helminth Proteins - genetics ; Host-Parasite Interactions ; Immunology ; Invertebrates ; Medical Microbiology ; Microbial genetics ; Microbiology ; Original Paper ; Parasitism ; Physiological aspects ; Protein Sorting Signals ; Virulence Factors - genetics</subject><ispartof>Parasitology research (1987), 2010-04, Vol.106 (5), p.1027-1032</ispartof><rights>Springer-Verlag 2010</rights><rights>2015 INIST-CNRS</rights><rights>COPYRIGHT 2010 Springer</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c468t-a31be27ed011ed5c72fab261d3dfe1db37302835b768f4d09eafde05879814243</citedby><cites>FETCH-LOGICAL-c468t-a31be27ed011ed5c72fab261d3dfe1db37302835b768f4d09eafde05879814243</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00436-010-1751-z$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00436-010-1751-z$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,41486,42555,51317</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=22649510$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20177908$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Fang, Wenzhen</creatorcontrib><creatorcontrib>Xu, Shisan</creatorcontrib><creatorcontrib>Wang, Yinan</creatorcontrib><creatorcontrib>Ni, Fang</creatorcontrib><creatorcontrib>Zhang, Shaolei</creatorcontrib><creatorcontrib>Liu, Jiang</creatorcontrib><creatorcontrib>Chen, Xiaobin</creatorcontrib><creatorcontrib>Luo, Damin</creatorcontrib><title>ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes</title><title>Parasitology research (1987)</title><addtitle>Parasitol Res</addtitle><addtitle>Parasitol Res</addtitle><description>The expressed sequence tags (ESTs) of Angiostrongylus cantonensis were analyzed in an attempt to gain further insight into its genomic expression patterns. A total of 1,277 ESTs of A. cantonensis were randomly downloaded from NCBI databank. ESTs were analyzed and annotated using Blastx. The result showed that there were 60 ESTs had no match to any of the proteins and gene sequences in the published databases, and 695 ESTs score more than 80. According to the function, the identified 695 ESTs could be grouped into 13 categories related to metabolism, cellular development, immune evasion, host-parasite interactions, and so on. Among them, 65 (9.4%) were proteases and protease inhibitors, represented 19 potential proteases and protease inhibitors genes; 42 (6.0%) were allergens or antigens, represented 15 potential antigens/allergens genes. SignalP analysis was applied to the 19 putative proteases and protease inhibitors and the 15 antigens/allergens protein sequences to identify the potential signal peptides and anchors. The result demonstrated that there were ten putative proteins had N-terminal signal peptides and three had signal anchors, these putative excretory/secretory proteins might be the products of potential parasitism genes which played an important role in the adaptation of A. cantonensis to a parasitism life. These parasitism genes and proteins identified are expected to become potential targets for future research on anti-A. cantonensis drugs; moreover, the resulting genetic information is useful in elucidating the mechanisms of parasitism of A. cantonensis.</description><subject>Angiostrongylus cantonensis</subject><subject>Angiostrongylus cantonensis - genetics</subject><subject>Angiostrongylus cantonensis - pathogenicity</subject><subject>Animals</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Expressed Sequence Tags</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gene expression</subject><subject>General aspects</subject><subject>General aspects and techniques. Study of several systematic groups. Models</subject><subject>Genetic aspects</subject><subject>Health aspects</subject><subject>Helminth Proteins - genetics</subject><subject>Host-Parasite Interactions</subject><subject>Immunology</subject><subject>Invertebrates</subject><subject>Medical Microbiology</subject><subject>Microbial genetics</subject><subject>Microbiology</subject><subject>Original Paper</subject><subject>Parasitism</subject><subject>Physiological aspects</subject><subject>Protein Sorting Signals</subject><subject>Virulence Factors - genetics</subject><issn>0932-0113</issn><issn>1432-1955</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkcFu1DAQhi0EotvCA3CBXBCnlBk7jhNuq6oUpEocSs-Wk9jBVdZePMlh-_R4mwVuYB889nz_zMg_Y28QLhFAfSSAStQlIJSoJJaPz9gGK8FLbKV8zjbQ5hgQxRk7J3oAQFVX1Ut2xnOkWmg2TF_fFfsUZ-sDFSaY6UCeiuiKbRh9pDnFMB6mhYrehDkGG3L601ExLP38BM4_bLHPBcLszVTsTTLkZ0-7YrTB0iv2wpmJ7OvTecHuP19_v_pS3n67-Xq1vS37qm7m0gjsLFd2yNPaQfaKO9PxGgcxOItDJ5QA3gjZqbpx1QCtNW6wIBvVNljxSlywD2vdPNrPxdKsd556O00m2LiQbusGa2wk_JdUIi9Z4ZG8XMnRTFb74OKcTJ_3YHe-z5_hfH7fCpBtW2c_sgBXQZ8iUbJO75PfmXTQCPromF4d03C8Z8f0Y9a8PY2zdDs7_FH8tigD70-Aod5MLpnQe_rL8bpq5dO0fOUop8Jok36IS8qO0j-7v1tFzkRtxpQL39_l1gKw4QIViF9QWrgg</recordid><startdate>20100401</startdate><enddate>20100401</enddate><creator>Fang, Wenzhen</creator><creator>Xu, Shisan</creator><creator>Wang, Yinan</creator><creator>Ni, Fang</creator><creator>Zhang, Shaolei</creator><creator>Liu, Jiang</creator><creator>Chen, Xiaobin</creator><creator>Luo, Damin</creator><general>Berlin/Heidelberg : Springer-Verlag</general><general>Springer-Verlag</general><general>Springer</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20100401</creationdate><title>ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes</title><author>Fang, Wenzhen ; Xu, Shisan ; Wang, Yinan ; Ni, Fang ; Zhang, Shaolei ; Liu, Jiang ; Chen, Xiaobin ; Luo, Damin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c468t-a31be27ed011ed5c72fab261d3dfe1db37302835b768f4d09eafde05879814243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Angiostrongylus cantonensis</topic><topic>Angiostrongylus cantonensis - genetics</topic><topic>Angiostrongylus cantonensis - pathogenicity</topic><topic>Animals</topic><topic>Biological and medical sciences</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Expressed Sequence Tags</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Gene expression</topic><topic>General aspects</topic><topic>General aspects and techniques. Study of several systematic groups. Models</topic><topic>Genetic aspects</topic><topic>Health aspects</topic><topic>Helminth Proteins - genetics</topic><topic>Host-Parasite Interactions</topic><topic>Immunology</topic><topic>Invertebrates</topic><topic>Medical Microbiology</topic><topic>Microbial genetics</topic><topic>Microbiology</topic><topic>Original Paper</topic><topic>Parasitism</topic><topic>Physiological aspects</topic><topic>Protein Sorting Signals</topic><topic>Virulence Factors - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Fang, Wenzhen</creatorcontrib><creatorcontrib>Xu, Shisan</creatorcontrib><creatorcontrib>Wang, Yinan</creatorcontrib><creatorcontrib>Ni, Fang</creatorcontrib><creatorcontrib>Zhang, Shaolei</creatorcontrib><creatorcontrib>Liu, Jiang</creatorcontrib><creatorcontrib>Chen, Xiaobin</creatorcontrib><creatorcontrib>Luo, Damin</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Parasitology research (1987)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Fang, Wenzhen</au><au>Xu, Shisan</au><au>Wang, Yinan</au><au>Ni, Fang</au><au>Zhang, Shaolei</au><au>Liu, Jiang</au><au>Chen, Xiaobin</au><au>Luo, Damin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes</atitle><jtitle>Parasitology research (1987)</jtitle><stitle>Parasitol Res</stitle><addtitle>Parasitol Res</addtitle><date>2010-04-01</date><risdate>2010</risdate><volume>106</volume><issue>5</issue><spage>1027</spage><epage>1032</epage><pages>1027-1032</pages><issn>0932-0113</issn><eissn>1432-1955</eissn><coden>PARREZ</coden><abstract>The expressed sequence tags (ESTs) of Angiostrongylus cantonensis were analyzed in an attempt to gain further insight into its genomic expression patterns. A total of 1,277 ESTs of A. cantonensis were randomly downloaded from NCBI databank. ESTs were analyzed and annotated using Blastx. The result showed that there were 60 ESTs had no match to any of the proteins and gene sequences in the published databases, and 695 ESTs score more than 80. According to the function, the identified 695 ESTs could be grouped into 13 categories related to metabolism, cellular development, immune evasion, host-parasite interactions, and so on. Among them, 65 (9.4%) were proteases and protease inhibitors, represented 19 potential proteases and protease inhibitors genes; 42 (6.0%) were allergens or antigens, represented 15 potential antigens/allergens genes. SignalP analysis was applied to the 19 putative proteases and protease inhibitors and the 15 antigens/allergens protein sequences to identify the potential signal peptides and anchors. The result demonstrated that there were ten putative proteins had N-terminal signal peptides and three had signal anchors, these putative excretory/secretory proteins might be the products of potential parasitism genes which played an important role in the adaptation of A. cantonensis to a parasitism life. These parasitism genes and proteins identified are expected to become potential targets for future research on anti-A. cantonensis drugs; moreover, the resulting genetic information is useful in elucidating the mechanisms of parasitism of A. cantonensis.</abstract><cop>Berlin/Heidelberg</cop><pub>Berlin/Heidelberg : Springer-Verlag</pub><pmid>20177908</pmid><doi>10.1007/s00436-010-1751-z</doi><tpages>6</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0932-0113
ispartof Parasitology research (1987), 2010-04, Vol.106 (5), p.1027-1032
issn 0932-0113
1432-1955
language eng
recordid cdi_proquest_miscellaneous_968161850
source MEDLINE; SpringerLink Journals - AutoHoldings
subjects Angiostrongylus cantonensis
Angiostrongylus cantonensis - genetics
Angiostrongylus cantonensis - pathogenicity
Animals
Biological and medical sciences
Biomedical and Life Sciences
Biomedicine
Expressed Sequence Tags
Fundamental and applied biological sciences. Psychology
Gene expression
General aspects
General aspects and techniques. Study of several systematic groups. Models
Genetic aspects
Health aspects
Helminth Proteins - genetics
Host-Parasite Interactions
Immunology
Invertebrates
Medical Microbiology
Microbial genetics
Microbiology
Original Paper
Parasitism
Physiological aspects
Protein Sorting Signals
Virulence Factors - genetics
title ES proteins analysis of Angiostrongylus cantonensis: products of the potential parasitism genes
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-10T06%3A28%3A28IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=ES%20proteins%20analysis%20of%20Angiostrongylus%20cantonensis:%20products%20of%20the%20potential%20parasitism%20genes&rft.jtitle=Parasitology%20research%20(1987)&rft.au=Fang,%20Wenzhen&rft.date=2010-04-01&rft.volume=106&rft.issue=5&rft.spage=1027&rft.epage=1032&rft.pages=1027-1032&rft.issn=0932-0113&rft.eissn=1432-1955&rft.coden=PARREZ&rft_id=info:doi/10.1007/s00436-010-1751-z&rft_dat=%3Cgale_proqu%3EA305996007%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=733335410&rft_id=info:pmid/20177908&rft_galeid=A305996007&rfr_iscdi=true