Literature mining of host―pathogen interactions: comparing feature-based supervised learning and language-based approaches

In an infectious disease, the pathogen's strategy to enter the host organism and breach its immune defenses often involves interactions between the host and pathogen proteins. Currently, the experimental data on host-pathogen interactions (HPIs) are scattered across multiple databases, which ar...

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Veröffentlicht in:	Bioinformatics (Oxford, England) England), 2012-03, Vol.28 (6), p.867-875
Hauptverfasser:	THIEU, Thanh, JOSHI, Sneha, WARREN, Samantha, KORKIN, Dmitry
Format:	Artikel
Sprache:	eng
Schlagworte:	Animals Biological and medical sciences Data Mining Fundamental and applied biological sciences. Psychology General aspects Host-Pathogen Interactions Humans Infection - metabolism Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Natural Language Processing Proteins - metabolism PubMed Software Support Vector Machine
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