Molecular epidemiology and genetic diversity of Campylobacter jejuni in ruminants
Multi-locus sequence typing was performed on 1003 Campylobacter jejuni isolates collected in a 2-year longitudinal study of 15 dairy farms and four sheep farms in Lancashire, UK. There was considerable farm-level variation in occurrence and prevalence of clonal complexes (CC). Clonal complexes ST61,...
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| Veröffentlicht in: | Epidemiology and infection 2011-11, Vol.139 (11), p.1661-1671 |
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| container_title | Epidemiology and infection |
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| creator | GROVE-WHITE, D. H. LEATHERBARROW, A. J. H. CRIPPS, P. J. DIGGLE, P. J. FRENCH, N. P. |
| description | Multi-locus sequence typing was performed on 1003 Campylobacter jejuni isolates collected in a 2-year longitudinal study of 15 dairy farms and four sheep farms in Lancashire, UK. There was considerable farm-level variation in occurrence and prevalence of clonal complexes (CC). Clonal complexes ST61, ST21, ST403 and ST45 were most prevalent in cattle while in sheep CC ST42, ST21, ST48 and ST52 were most prevalent. CC ST45, a complex previously shown to be more common in summer months in human cases, was more prevalent in summer in our ruminant samples. Gene flow analysis demonstrated a high level of genetic heterogeneity at the within-farm level. Sequence-type diversity was greater in cattle compared to sheep, in cattle at pasture vs. housed, and in isolates from farms on the Pennines compared to the Southern Fylde. Sequence-type diversity was greatest in isolates belonging to CC ST21, ST45 and ST206. |
| doi_str_mv | 10.1017/S0950268810002736 |
| format | Article |
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H. ; LEATHERBARROW, A. J. H. ; CRIPPS, P. J. ; DIGGLE, P. J. ; FRENCH, N. P.</creator><creatorcontrib>GROVE-WHITE, D. H. ; LEATHERBARROW, A. J. H. ; CRIPPS, P. J. ; DIGGLE, P. J. ; FRENCH, N. P.</creatorcontrib><description>Multi-locus sequence typing was performed on 1003 Campylobacter jejuni isolates collected in a 2-year longitudinal study of 15 dairy farms and four sheep farms in Lancashire, UK. There was considerable farm-level variation in occurrence and prevalence of clonal complexes (CC). Clonal complexes ST61, ST21, ST403 and ST45 were most prevalent in cattle while in sheep CC ST42, ST21, ST48 and ST52 were most prevalent. CC ST45, a complex previously shown to be more common in summer months in human cases, was more prevalent in summer in our ruminant samples. Gene flow analysis demonstrated a high level of genetic heterogeneity at the within-farm level. Sequence-type diversity was greater in cattle compared to sheep, in cattle at pasture vs. housed, and in isolates from farms on the Pennines compared to the Southern Fylde. Sequence-type diversity was greatest in isolates belonging to CC ST21, ST45 and ST206.</description><identifier>ISSN: 0950-2688</identifier><identifier>EISSN: 1469-4409</identifier><identifier>DOI: 10.1017/S0950268810002736</identifier><identifier>PMID: 21134320</identifier><identifier>CODEN: EPINEU</identifier><language>eng</language><publisher>Cambridge, UK: Cambridge University Press</publisher><subject>Animals ; Bacteriology ; Biodiversity ; Biological and medical sciences ; Campylobacter ; Campylobacter Infections - epidemiology ; Campylobacter Infections - microbiology ; Campylobacter Infections - veterinary ; Campylobacter jejuni ; Campylobacter jejuni - genetics ; Campylobacter jejuni - isolation & purification ; Cattle ; Cattle Diseases - epidemiology ; Cattle Diseases - microbiology ; Cross-Sectional Studies ; Dairy cattle ; Dairy farms ; England - epidemiology ; Epidemiology ; Feces - microbiology ; Female ; Fundamental and applied biological sciences. Psychology ; Gastrointestinal infection ; Genetic Variation ; Infections ; Longitudinal Studies ; Male ; Microbiology ; Milk ; Miscellaneous ; Molecular Epidemiology ; Multilocus Sequence Typing ; Multivariate Analysis ; Pastures ; Ruminantia ; Ruminants ; Rural areas ; Sheep ; Sheep Diseases - epidemiology ; Sheep Diseases - microbiology</subject><ispartof>Epidemiology and infection, 2011-11, Vol.139 (11), p.1661-1671</ispartof><rights>Copyright © Cambridge University Press 2010</rights><rights>Cambridge University Press 2011</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c455t-ed8785dc5ce8363d22728071de50ae248b84d355503a84ea4fbbcf4c6be051d93</citedby><cites>FETCH-LOGICAL-c455t-ed8785dc5ce8363d22728071de50ae248b84d355503a84ea4fbbcf4c6be051d93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/41262732$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/41262732$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,776,780,799,27901,27902,57992,58225</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24578914$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21134320$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>GROVE-WHITE, D. H.</creatorcontrib><creatorcontrib>LEATHERBARROW, A. J. H.</creatorcontrib><creatorcontrib>CRIPPS, P. J.</creatorcontrib><creatorcontrib>DIGGLE, P. J.</creatorcontrib><creatorcontrib>FRENCH, N. P.</creatorcontrib><title>Molecular epidemiology and genetic diversity of Campylobacter jejuni in ruminants</title><title>Epidemiology and infection</title><addtitle>Epidemiol Infect</addtitle><description>Multi-locus sequence typing was performed on 1003 Campylobacter jejuni isolates collected in a 2-year longitudinal study of 15 dairy farms and four sheep farms in Lancashire, UK. There was considerable farm-level variation in occurrence and prevalence of clonal complexes (CC). Clonal complexes ST61, ST21, ST403 and ST45 were most prevalent in cattle while in sheep CC ST42, ST21, ST48 and ST52 were most prevalent. CC ST45, a complex previously shown to be more common in summer months in human cases, was more prevalent in summer in our ruminant samples. Gene flow analysis demonstrated a high level of genetic heterogeneity at the within-farm level. Sequence-type diversity was greater in cattle compared to sheep, in cattle at pasture vs. housed, and in isolates from farms on the Pennines compared to the Southern Fylde. Sequence-type diversity was greatest in isolates belonging to CC ST21, ST45 and ST206.</description><subject>Animals</subject><subject>Bacteriology</subject><subject>Biodiversity</subject><subject>Biological and medical sciences</subject><subject>Campylobacter</subject><subject>Campylobacter Infections - epidemiology</subject><subject>Campylobacter Infections - microbiology</subject><subject>Campylobacter Infections - veterinary</subject><subject>Campylobacter jejuni</subject><subject>Campylobacter jejuni - genetics</subject><subject>Campylobacter jejuni - isolation & purification</subject><subject>Cattle</subject><subject>Cattle Diseases - epidemiology</subject><subject>Cattle Diseases - microbiology</subject><subject>Cross-Sectional Studies</subject><subject>Dairy cattle</subject><subject>Dairy farms</subject><subject>England - epidemiology</subject><subject>Epidemiology</subject><subject>Feces - microbiology</subject><subject>Female</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gastrointestinal infection</subject><subject>Genetic Variation</subject><subject>Infections</subject><subject>Longitudinal Studies</subject><subject>Male</subject><subject>Microbiology</subject><subject>Milk</subject><subject>Miscellaneous</subject><subject>Molecular Epidemiology</subject><subject>Multilocus Sequence Typing</subject><subject>Multivariate Analysis</subject><subject>Pastures</subject><subject>Ruminantia</subject><subject>Ruminants</subject><subject>Rural areas</subject><subject>Sheep</subject><subject>Sheep Diseases - epidemiology</subject><subject>Sheep Diseases - microbiology</subject><issn>0950-2688</issn><issn>1469-4409</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqF0U1r3DAQBmBREppN2h_QQ4IohJzc6tOWj2HJFySE0vZsZGm8yNjSRrIL---jZbcJtIScdJhnZvQyCH2h5BsltPr-k9SSsFIpSghhFS8_oAUVZV0IQeoDtNiWi239CB2n1GdUM1V9REeMUi44Iwv04yEMYOZBRwxrZ2F0YQirDdbe4hV4mJzB1v2BmNy0waHDSz2uN0NotZkg4h762TvsPI7z6Lz2U_qEDjs9JPi8f0_Q7-urX8vb4v7x5m55eV8YIeVUgFWVktZIA4qX3DJWMUUqakESDUyoVgnLpZSEayVAi65tTSdM2QKR1Nb8BF3s5q5jeJohTc3okoFh0B7CnJoctSYq531f5rWVZIJl-fUf2Yc5-hwjIyVJTWmZEd0hE0NKEbpmHd2o46ahpNnepfnvLrnnbD94bkewLx1_D5HB-R7oZPTQRe2NS69OyErVVGR3unN9mkJ8qQvKyrxom4DvP6fHNjq7gtcIb3_vGWGXrS8</recordid><startdate>20111101</startdate><enddate>20111101</enddate><creator>GROVE-WHITE, D. 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H.</au><au>LEATHERBARROW, A. J. H.</au><au>CRIPPS, P. J.</au><au>DIGGLE, P. J.</au><au>FRENCH, N. P.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular epidemiology and genetic diversity of Campylobacter jejuni in ruminants</atitle><jtitle>Epidemiology and infection</jtitle><addtitle>Epidemiol Infect</addtitle><date>2011-11-01</date><risdate>2011</risdate><volume>139</volume><issue>11</issue><spage>1661</spage><epage>1671</epage><pages>1661-1671</pages><issn>0950-2688</issn><eissn>1469-4409</eissn><coden>EPINEU</coden><abstract>Multi-locus sequence typing was performed on 1003 Campylobacter jejuni isolates collected in a 2-year longitudinal study of 15 dairy farms and four sheep farms in Lancashire, UK. There was considerable farm-level variation in occurrence and prevalence of clonal complexes (CC). Clonal complexes ST61, ST21, ST403 and ST45 were most prevalent in cattle while in sheep CC ST42, ST21, ST48 and ST52 were most prevalent. CC ST45, a complex previously shown to be more common in summer months in human cases, was more prevalent in summer in our ruminant samples. Gene flow analysis demonstrated a high level of genetic heterogeneity at the within-farm level. Sequence-type diversity was greater in cattle compared to sheep, in cattle at pasture vs. housed, and in isolates from farms on the Pennines compared to the Southern Fylde. Sequence-type diversity was greatest in isolates belonging to CC ST21, ST45 and ST206.</abstract><cop>Cambridge, UK</cop><pub>Cambridge University Press</pub><pmid>21134320</pmid><doi>10.1017/S0950268810002736</doi><tpages>11</tpages></addata></record> |
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| subjects | Animals Bacteriology Biodiversity Biological and medical sciences Campylobacter Campylobacter Infections - epidemiology Campylobacter Infections - microbiology Campylobacter Infections - veterinary Campylobacter jejuni Campylobacter jejuni - genetics Campylobacter jejuni - isolation & purification Cattle Cattle Diseases - epidemiology Cattle Diseases - microbiology Cross-Sectional Studies Dairy cattle Dairy farms England - epidemiology Epidemiology Feces - microbiology Female Fundamental and applied biological sciences. Psychology Gastrointestinal infection Genetic Variation Infections Longitudinal Studies Male Microbiology Milk Miscellaneous Molecular Epidemiology Multilocus Sequence Typing Multivariate Analysis Pastures Ruminantia Ruminants Rural areas Sheep Sheep Diseases - epidemiology Sheep Diseases - microbiology |
| title | Molecular epidemiology and genetic diversity of Campylobacter jejuni in ruminants |
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