A Hardware Accelerator for the Fast Retrieval of DIALIGN Biological Sequence Alignments in Linear Space

The recent and astonishing accomplishments in the field of Genomics would not have been possible without the techniques, algorithms, and tools developed in Bioinformatics. Biological sequence comparison is an important operation in Bioinformatics because it is used to determine how similar two seque...

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Veröffentlicht in:	IEEE transactions on computers 2010-06, Vol.59 (6), p.808-821
Hauptverfasser:	Boukerche, Azzedine, Correa, Jan M, Melo, Alba, Jacobi, Ricardo P
Format:	Artikel
Sprache:	eng
Schlagworte:	Accelerators Algorithm design and analysis Algorithms Alignment Arrays Bioinformatics Biological Biology Biology and genetics dynamic programming Field programmable gate arrays Hardware Heuristic Heuristic algorithms Optimization Retrieval special-purpose and application-based systems Studies
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