Short echo time in vivo prostate 1H-MRSI
Visualization of short echo time (TE) metabolites in prostate magnetic resonance spectroscopic imaging is difficult due to lipid contamination and pulse timing constraints. In this work, we present a modified pulse sequence to permit short echo time (TE=40ms) acquisitions with reduced lipid contamin...
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Veröffentlicht in: | Magnetic resonance imaging 2012-02, Vol.30 (2), p.195-204 |
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description | Visualization of short echo time (TE) metabolites in prostate magnetic resonance spectroscopic imaging is difficult due to lipid contamination and pulse timing constraints. In this work, we present a modified pulse sequence to permit short echo time (TE=40ms) acquisitions with reduced lipid contamination for the detection of short TE metabolites. The modified pulse sequence employs the conformal voxel MRS (CV-MRS) technique, which automatically optimizes the placement of spatial saturation planes to adapt the excitation volume to the shape of the prostate, thus reducing lipid contamination in prostate magnetic resonance spectroscopic imaging (MRSI). Metabolites were measured and assessed using a modified version of LCModel for analysis of in vivo prostate spectra. We demonstrate the feasibility of acquiring high quality spectra at short TEs, and show the measurement of short TE metabolites, myo-inositol, scyllo-inositol, taurine and glutamine/glutamate for both single and multi-voxel acquisitions. In single voxels experiments, the reduction in TE resulted in 57% improvement in the signal-to-noise ratio (SNR). Additional 3D MRSI experiments comparing short (TE=40 ms), and long (TE=130 ms) TE acquisitions revealed a 35% improvement in the number of adequately fitted metabolite peaks (775 voxels over all subjects). This resulted in a 42±24% relative improvement in the number of voxels with detectable citrate that were well-fitted using LCmodel. In this study, we demonstrate that high quality prostate spectra can be obtained by reducing the TE to 40 ms to detect short T2 metabolites, while maintaining positive signal intensity of the spin-coupled citrate multiplet and managing lipid suppression. |
doi_str_mv | 10.1016/j.mri.2011.09.020 |
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In this work, we present a modified pulse sequence to permit short echo time (TE=40ms) acquisitions with reduced lipid contamination for the detection of short TE metabolites. The modified pulse sequence employs the conformal voxel MRS (CV-MRS) technique, which automatically optimizes the placement of spatial saturation planes to adapt the excitation volume to the shape of the prostate, thus reducing lipid contamination in prostate magnetic resonance spectroscopic imaging (MRSI). Metabolites were measured and assessed using a modified version of LCModel for analysis of in vivo prostate spectra. We demonstrate the feasibility of acquiring high quality spectra at short TEs, and show the measurement of short TE metabolites, myo-inositol, scyllo-inositol, taurine and glutamine/glutamate for both single and multi-voxel acquisitions. In single voxels experiments, the reduction in TE resulted in 57% improvement in the signal-to-noise ratio (SNR). Additional 3D MRSI experiments comparing short (TE=40 ms), and long (TE=130 ms) TE acquisitions revealed a 35% improvement in the number of adequately fitted metabolite peaks (775 voxels over all subjects). This resulted in a 42±24% relative improvement in the number of voxels with detectable citrate that were well-fitted using LCmodel. In this study, we demonstrate that high quality prostate spectra can be obtained by reducing the TE to 40 ms to detect short T2 metabolites, while maintaining positive signal intensity of the spin-coupled citrate multiplet and managing lipid suppression.</description><identifier>ISSN: 0730-725X</identifier><identifier>EISSN: 1873-5894</identifier><identifier>DOI: 10.1016/j.mri.2011.09.020</identifier><identifier>PMID: 22154684</identifier><language>eng</language><publisher>Netherlands: Elsevier Inc</publisher><subject>Adult ; Aged ; Algorithms ; Conformal voxel ; Humans ; LCModel ; Lipid contamination ; Lipid suppression ; Magnetic Resonance Imaging - methods ; Magnetic resonance spectroscopic imaging ; Magnetic Resonance Spectroscopy - methods ; Male ; Middle Aged ; Prostate - anatomy & histology ; Prostate - metabolism ; Prostate cancer ; Protons ; Reproducibility of Results ; Sensitivity and Specificity ; Short TE</subject><ispartof>Magnetic resonance imaging, 2012-02, Vol.30 (2), p.195-204</ispartof><rights>2012 Elsevier Inc.</rights><rights>Copyright © 2012 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2294-e51fba7c9d591c0fe5f5482c0bfff11dffff7dd5efdfe8a1a7115bb2041520373</citedby><cites>FETCH-LOGICAL-c2294-e51fba7c9d591c0fe5f5482c0bfff11dffff7dd5efdfe8a1a7115bb2041520373</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0730725X11003523$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22154684$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Venugopal, Niranjan</creatorcontrib><creatorcontrib>McCurdy, Boyd</creatorcontrib><creatorcontrib>Al Mehairi, Salem</creatorcontrib><creatorcontrib>Alamri, Aziz</creatorcontrib><creatorcontrib>Sandhu, Gurdarshan S.</creatorcontrib><creatorcontrib>Sivalingam, Sri</creatorcontrib><creatorcontrib>Drachenberg, Darrel</creatorcontrib><creatorcontrib>Ryner, Lawrence</creatorcontrib><title>Short echo time in vivo prostate 1H-MRSI</title><title>Magnetic resonance imaging</title><addtitle>Magn Reson Imaging</addtitle><description>Visualization of short echo time (TE) metabolites in prostate magnetic resonance spectroscopic imaging is difficult due to lipid contamination and pulse timing constraints. In this work, we present a modified pulse sequence to permit short echo time (TE=40ms) acquisitions with reduced lipid contamination for the detection of short TE metabolites. The modified pulse sequence employs the conformal voxel MRS (CV-MRS) technique, which automatically optimizes the placement of spatial saturation planes to adapt the excitation volume to the shape of the prostate, thus reducing lipid contamination in prostate magnetic resonance spectroscopic imaging (MRSI). Metabolites were measured and assessed using a modified version of LCModel for analysis of in vivo prostate spectra. We demonstrate the feasibility of acquiring high quality spectra at short TEs, and show the measurement of short TE metabolites, myo-inositol, scyllo-inositol, taurine and glutamine/glutamate for both single and multi-voxel acquisitions. In single voxels experiments, the reduction in TE resulted in 57% improvement in the signal-to-noise ratio (SNR). Additional 3D MRSI experiments comparing short (TE=40 ms), and long (TE=130 ms) TE acquisitions revealed a 35% improvement in the number of adequately fitted metabolite peaks (775 voxels over all subjects). This resulted in a 42±24% relative improvement in the number of voxels with detectable citrate that were well-fitted using LCmodel. In this study, we demonstrate that high quality prostate spectra can be obtained by reducing the TE to 40 ms to detect short T2 metabolites, while maintaining positive signal intensity of the spin-coupled citrate multiplet and managing lipid suppression.</description><subject>Adult</subject><subject>Aged</subject><subject>Algorithms</subject><subject>Conformal voxel</subject><subject>Humans</subject><subject>LCModel</subject><subject>Lipid contamination</subject><subject>Lipid suppression</subject><subject>Magnetic Resonance Imaging - methods</subject><subject>Magnetic resonance spectroscopic imaging</subject><subject>Magnetic Resonance Spectroscopy - methods</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Prostate - anatomy & histology</subject><subject>Prostate - metabolism</subject><subject>Prostate cancer</subject><subject>Protons</subject><subject>Reproducibility of Results</subject><subject>Sensitivity and Specificity</subject><subject>Short TE</subject><issn>0730-725X</issn><issn>1873-5894</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkMFKw0AQhhdRbK0-gBfJTS-JM5tsk8WTFLWFimAVvC3J7izd0jQ1mxZ8e7e0etTLzOX7f2Y-xi4REgQc3i6SunUJB8QEZAIcjlgfizyNRSGzY9aHPIU45-Kjx868XwCA4Kk4ZT3OUWTDIuuzm9m8abuI9LyJOldT5FbR1m2baN02vis7inAcP7_OJufsxJZLTxeHPWDvjw9vo3E8fXmajO6nseZcZjEJtFWZa2mERA2WhBVZwTVU1lpEE6bNjRFkjaWixDJHFFXFIUPBIc3TAbve94YDPjfkO1U7r2m5LFfUbLySPEVZhJf_J1GkRRasBBL3pA5P-ZasWreuLtsvhaB2JtVCBZNqZ1KBVPvM1aF9U9VkfhM_6gJwtwco2Ng6apXXjlaajGtJd8o07o_6b6_wgdk</recordid><startdate>201202</startdate><enddate>201202</enddate><creator>Venugopal, Niranjan</creator><creator>McCurdy, Boyd</creator><creator>Al Mehairi, Salem</creator><creator>Alamri, Aziz</creator><creator>Sandhu, Gurdarshan S.</creator><creator>Sivalingam, Sri</creator><creator>Drachenberg, Darrel</creator><creator>Ryner, Lawrence</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>201202</creationdate><title>Short echo time in vivo prostate 1H-MRSI</title><author>Venugopal, Niranjan ; McCurdy, Boyd ; Al Mehairi, Salem ; Alamri, Aziz ; Sandhu, Gurdarshan S. ; Sivalingam, Sri ; Drachenberg, Darrel ; Ryner, Lawrence</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2294-e51fba7c9d591c0fe5f5482c0bfff11dffff7dd5efdfe8a1a7115bb2041520373</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Adult</topic><topic>Aged</topic><topic>Algorithms</topic><topic>Conformal voxel</topic><topic>Humans</topic><topic>LCModel</topic><topic>Lipid contamination</topic><topic>Lipid suppression</topic><topic>Magnetic Resonance Imaging - methods</topic><topic>Magnetic resonance spectroscopic imaging</topic><topic>Magnetic Resonance Spectroscopy - methods</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Prostate - anatomy & histology</topic><topic>Prostate - metabolism</topic><topic>Prostate cancer</topic><topic>Protons</topic><topic>Reproducibility of Results</topic><topic>Sensitivity and Specificity</topic><topic>Short TE</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Venugopal, Niranjan</creatorcontrib><creatorcontrib>McCurdy, Boyd</creatorcontrib><creatorcontrib>Al Mehairi, Salem</creatorcontrib><creatorcontrib>Alamri, Aziz</creatorcontrib><creatorcontrib>Sandhu, Gurdarshan S.</creatorcontrib><creatorcontrib>Sivalingam, Sri</creatorcontrib><creatorcontrib>Drachenberg, Darrel</creatorcontrib><creatorcontrib>Ryner, Lawrence</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Magnetic resonance imaging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Venugopal, Niranjan</au><au>McCurdy, Boyd</au><au>Al Mehairi, Salem</au><au>Alamri, Aziz</au><au>Sandhu, Gurdarshan S.</au><au>Sivalingam, Sri</au><au>Drachenberg, Darrel</au><au>Ryner, Lawrence</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Short echo time in vivo prostate 1H-MRSI</atitle><jtitle>Magnetic resonance imaging</jtitle><addtitle>Magn Reson Imaging</addtitle><date>2012-02</date><risdate>2012</risdate><volume>30</volume><issue>2</issue><spage>195</spage><epage>204</epage><pages>195-204</pages><issn>0730-725X</issn><eissn>1873-5894</eissn><abstract>Visualization of short echo time (TE) metabolites in prostate magnetic resonance spectroscopic imaging is difficult due to lipid contamination and pulse timing constraints. In this work, we present a modified pulse sequence to permit short echo time (TE=40ms) acquisitions with reduced lipid contamination for the detection of short TE metabolites. The modified pulse sequence employs the conformal voxel MRS (CV-MRS) technique, which automatically optimizes the placement of spatial saturation planes to adapt the excitation volume to the shape of the prostate, thus reducing lipid contamination in prostate magnetic resonance spectroscopic imaging (MRSI). Metabolites were measured and assessed using a modified version of LCModel for analysis of in vivo prostate spectra. We demonstrate the feasibility of acquiring high quality spectra at short TEs, and show the measurement of short TE metabolites, myo-inositol, scyllo-inositol, taurine and glutamine/glutamate for both single and multi-voxel acquisitions. In single voxels experiments, the reduction in TE resulted in 57% improvement in the signal-to-noise ratio (SNR). Additional 3D MRSI experiments comparing short (TE=40 ms), and long (TE=130 ms) TE acquisitions revealed a 35% improvement in the number of adequately fitted metabolite peaks (775 voxels over all subjects). This resulted in a 42±24% relative improvement in the number of voxels with detectable citrate that were well-fitted using LCmodel. In this study, we demonstrate that high quality prostate spectra can be obtained by reducing the TE to 40 ms to detect short T2 metabolites, while maintaining positive signal intensity of the spin-coupled citrate multiplet and managing lipid suppression.</abstract><cop>Netherlands</cop><pub>Elsevier Inc</pub><pmid>22154684</pmid><doi>10.1016/j.mri.2011.09.020</doi><tpages>10</tpages></addata></record> |
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subjects | Adult Aged Algorithms Conformal voxel Humans LCModel Lipid contamination Lipid suppression Magnetic Resonance Imaging - methods Magnetic resonance spectroscopic imaging Magnetic Resonance Spectroscopy - methods Male Middle Aged Prostate - anatomy & histology Prostate - metabolism Prostate cancer Protons Reproducibility of Results Sensitivity and Specificity Short TE |
title | Short echo time in vivo prostate 1H-MRSI |
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