Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer
Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. Th...
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description | Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins.
Structured digital
•
HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction)
•
HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction)
•
Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction)
•
HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction)
This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF. |
doi_str_mv | 10.1111/j.1742-4658.2011.08464.x |
format | Article |
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Structured digital
•
HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction)
•
HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction)
•
Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction)
•
HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction)
This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.</description><identifier>ISSN: 1742-464X</identifier><identifier>EISSN: 1742-4658</identifier><identifier>DOI: 10.1111/j.1742-4658.2011.08464.x</identifier><identifier>PMID: 22212508</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Alternative Splicing ; Amino Acid Sequence ; Amino acids ; Animals ; Blotting, Western ; Cell Nucleus - genetics ; Cercopithecus aethiops ; Chromatin ; Chromatin - metabolism ; chromatin binding ; COS Cells ; Fluorescent Antibody Technique ; Intercellular Signaling Peptides and Proteins - genetics ; Intercellular Signaling Peptides and Proteins - metabolism ; Mice ; Molecular biology ; Molecular Sequence Data ; N‐terminal processing ; phosphorylation ; Protein Isoforms ; Protein Multimerization ; Proteins ; PWWP domain ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; RNA, Messenger - genetics ; Sequence Homology, Amino Acid ; Spindle Apparatus - physiology</subject><ispartof>The FEBS journal, 2012-03, Vol.279 (5), p.737-751</ispartof><rights>2011 The Authors Journal compilation © 2011 FEBS</rights><rights>2011 The Authors Journal compilation © 2011 FEBS.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3964-5cd1159cf4a4056945738baa3f14f026fe5360b8a611fe10f3815e546953aa353</citedby><cites>FETCH-LOGICAL-c3964-5cd1159cf4a4056945738baa3f14f026fe5360b8a611fe10f3815e546953aa353</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1742-4658.2011.08464.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1742-4658.2011.08464.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,1427,27901,27902,45550,45551,46384,46808</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22212508$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Thakar, Ketan</creatorcontrib><creatorcontrib>Votteler, Ina</creatorcontrib><creatorcontrib>Kelkar, Dipti</creatorcontrib><creatorcontrib>Shidore, Teja</creatorcontrib><creatorcontrib>Gupta, Shivangi</creatorcontrib><creatorcontrib>Kelm, Sørge</creatorcontrib><creatorcontrib>Dietz, Frank</creatorcontrib><title>Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer</title><title>The FEBS journal</title><addtitle>FEBS J</addtitle><description>Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins.
Structured digital
•
HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction)
•
HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction)
•
Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction)
•
HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction)
This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.</description><subject>Alternative Splicing</subject><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Animals</subject><subject>Blotting, Western</subject><subject>Cell Nucleus - genetics</subject><subject>Cercopithecus aethiops</subject><subject>Chromatin</subject><subject>Chromatin - metabolism</subject><subject>chromatin binding</subject><subject>COS Cells</subject><subject>Fluorescent Antibody Technique</subject><subject>Intercellular Signaling Peptides and Proteins - genetics</subject><subject>Intercellular Signaling Peptides and Proteins - metabolism</subject><subject>Mice</subject><subject>Molecular biology</subject><subject>Molecular Sequence Data</subject><subject>N‐terminal processing</subject><subject>phosphorylation</subject><subject>Protein Isoforms</subject><subject>Protein Multimerization</subject><subject>Proteins</subject><subject>PWWP domain</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>RNA, Messenger - genetics</subject><subject>Sequence Homology, Amino Acid</subject><subject>Spindle Apparatus - physiology</subject><issn>1742-464X</issn><issn>1742-4658</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkMtKAzEUhoMo3l9BghtXHXNy62QjaLVWEBQv4C6k08SmdCY1mWLd-Qg-o0_ijNUuXHk250C-_yd8CGEgGTRzPMmgy2mHS5FnlABkJOeSZ4s1tL16WF_d_GkL7aQ0IYQJrtQm2qKUAhUk30YPV1VtoylqHyocHB7c3X6-f1DsU3Ahlgm_-nqMB-eX_Qz3xjGUpvYVHvpq5KvnNmBwmtnCO1_gsW2qQmnjHtpwZprs_s_eRY_9i4feoHN9c3nVO73uFExJ3hHFCECownHDiZCKiy7Lh8YwB9wRKp0VTJJhbiSAs0Acy0FYwaUSrKEE20VHy95ZDC9zm2pd-lTY6dRUNsyTVpR2RRe-ycM_5CTMY9V8roWYAgWygfIlVMSQUrROz6IvTXzTQHTrXU90q1S3enXrXX9714smevDTPx-WdrQK_opugJMl8Oqn9u3fxbp_cXbfnuwLXXSPqw</recordid><startdate>201203</startdate><enddate>201203</enddate><creator>Thakar, Ketan</creator><creator>Votteler, Ina</creator><creator>Kelkar, Dipti</creator><creator>Shidore, Teja</creator><creator>Gupta, Shivangi</creator><creator>Kelm, Sørge</creator><creator>Dietz, Frank</creator><general>Blackwell Publishing Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201203</creationdate><title>Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer</title><author>Thakar, Ketan ; Votteler, Ina ; Kelkar, Dipti ; Shidore, Teja ; Gupta, Shivangi ; Kelm, Sørge ; Dietz, Frank</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3964-5cd1159cf4a4056945738baa3f14f026fe5360b8a611fe10f3815e546953aa353</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Alternative Splicing</topic><topic>Amino Acid Sequence</topic><topic>Amino acids</topic><topic>Animals</topic><topic>Blotting, Western</topic><topic>Cell Nucleus - genetics</topic><topic>Cercopithecus aethiops</topic><topic>Chromatin</topic><topic>Chromatin - metabolism</topic><topic>chromatin binding</topic><topic>COS Cells</topic><topic>Fluorescent Antibody Technique</topic><topic>Intercellular Signaling Peptides and Proteins - genetics</topic><topic>Intercellular Signaling Peptides and Proteins - metabolism</topic><topic>Mice</topic><topic>Molecular biology</topic><topic>Molecular Sequence Data</topic><topic>N‐terminal processing</topic><topic>phosphorylation</topic><topic>Protein Isoforms</topic><topic>Protein Multimerization</topic><topic>Proteins</topic><topic>PWWP domain</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>RNA, Messenger - genetics</topic><topic>Sequence Homology, Amino Acid</topic><topic>Spindle Apparatus - physiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Thakar, Ketan</creatorcontrib><creatorcontrib>Votteler, Ina</creatorcontrib><creatorcontrib>Kelkar, Dipti</creatorcontrib><creatorcontrib>Shidore, Teja</creatorcontrib><creatorcontrib>Gupta, Shivangi</creatorcontrib><creatorcontrib>Kelm, Sørge</creatorcontrib><creatorcontrib>Dietz, Frank</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>The FEBS journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Thakar, Ketan</au><au>Votteler, Ina</au><au>Kelkar, Dipti</au><au>Shidore, Teja</au><au>Gupta, Shivangi</au><au>Kelm, Sørge</au><au>Dietz, Frank</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer</atitle><jtitle>The FEBS journal</jtitle><addtitle>FEBS J</addtitle><date>2012-03</date><risdate>2012</risdate><volume>279</volume><issue>5</issue><spage>737</spage><epage>751</epage><pages>737-751</pages><issn>1742-464X</issn><eissn>1742-4658</eissn><abstract>Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins.
Structured digital
•
HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction)
•
HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction)
•
Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction)
•
HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction)
•
HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2)
•
Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction)
This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>22212508</pmid><doi>10.1111/j.1742-4658.2011.08464.x</doi><tpages>15</tpages></addata></record> |
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source | Wiley Free Content; MEDLINE; IngentaConnect Free/Open Access Journals; Wiley Online Library Journals Frontfile Complete; Free Full-Text Journals in Chemistry |
subjects | Alternative Splicing Amino Acid Sequence Amino acids Animals Blotting, Western Cell Nucleus - genetics Cercopithecus aethiops Chromatin Chromatin - metabolism chromatin binding COS Cells Fluorescent Antibody Technique Intercellular Signaling Peptides and Proteins - genetics Intercellular Signaling Peptides and Proteins - metabolism Mice Molecular biology Molecular Sequence Data N‐terminal processing phosphorylation Protein Isoforms Protein Multimerization Proteins PWWP domain Recombinant Proteins - genetics Recombinant Proteins - metabolism RNA, Messenger - genetics Sequence Homology, Amino Acid Spindle Apparatus - physiology |
title | Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer |
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