Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer

Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. Th...

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Veröffentlicht in:The FEBS journal 2012-03, Vol.279 (5), p.737-751
Hauptverfasser: Thakar, Ketan, Votteler, Ina, Kelkar, Dipti, Shidore, Teja, Gupta, Shivangi, Kelm, Sørge, Dietz, Frank
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container_end_page 751
container_issue 5
container_start_page 737
container_title The FEBS journal
container_volume 279
creator Thakar, Ketan
Votteler, Ina
Kelkar, Dipti
Shidore, Teja
Gupta, Shivangi
Kelm, Sørge
Dietz, Frank
description Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins. Structured digital •  HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction) •  HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction) •  Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction) •  HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction) This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.
doi_str_mv 10.1111/j.1742-4658.2011.08464.x
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Chromatin binding of a specific heteromer</title><source>Wiley Free Content</source><source>MEDLINE</source><source>IngentaConnect Free/Open Access Journals</source><source>Wiley Online Library Journals Frontfile Complete</source><source>Free Full-Text Journals in Chemistry</source><creator>Thakar, Ketan ; Votteler, Ina ; Kelkar, Dipti ; Shidore, Teja ; Gupta, Shivangi ; Kelm, Sørge ; Dietz, Frank</creator><creatorcontrib>Thakar, Ketan ; Votteler, Ina ; Kelkar, Dipti ; Shidore, Teja ; Gupta, Shivangi ; Kelm, Sørge ; Dietz, Frank</creatorcontrib><description>Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins. Structured digital •  HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction) •  HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction) •  Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction) •  HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction) This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.</description><identifier>ISSN: 1742-464X</identifier><identifier>EISSN: 1742-4658</identifier><identifier>DOI: 10.1111/j.1742-4658.2011.08464.x</identifier><identifier>PMID: 22212508</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Alternative Splicing ; Amino Acid Sequence ; Amino acids ; Animals ; Blotting, Western ; Cell Nucleus - genetics ; Cercopithecus aethiops ; Chromatin ; Chromatin - metabolism ; chromatin binding ; COS Cells ; Fluorescent Antibody Technique ; Intercellular Signaling Peptides and Proteins - genetics ; Intercellular Signaling Peptides and Proteins - metabolism ; Mice ; Molecular biology ; Molecular Sequence Data ; N‐terminal processing ; phosphorylation ; Protein Isoforms ; Protein Multimerization ; Proteins ; PWWP domain ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; RNA, Messenger - genetics ; Sequence Homology, Amino Acid ; Spindle Apparatus - physiology</subject><ispartof>The FEBS journal, 2012-03, Vol.279 (5), p.737-751</ispartof><rights>2011 The Authors Journal compilation © 2011 FEBS</rights><rights>2011 The Authors Journal compilation © 2011 FEBS.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3964-5cd1159cf4a4056945738baa3f14f026fe5360b8a611fe10f3815e546953aa353</citedby><cites>FETCH-LOGICAL-c3964-5cd1159cf4a4056945738baa3f14f026fe5360b8a611fe10f3815e546953aa353</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1742-4658.2011.08464.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1742-4658.2011.08464.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,1427,27901,27902,45550,45551,46384,46808</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22212508$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Thakar, Ketan</creatorcontrib><creatorcontrib>Votteler, Ina</creatorcontrib><creatorcontrib>Kelkar, Dipti</creatorcontrib><creatorcontrib>Shidore, Teja</creatorcontrib><creatorcontrib>Gupta, Shivangi</creatorcontrib><creatorcontrib>Kelm, Sørge</creatorcontrib><creatorcontrib>Dietz, Frank</creatorcontrib><title>Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer</title><title>The FEBS journal</title><addtitle>FEBS J</addtitle><description>Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins. Structured digital •  HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction) •  HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction) •  Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction) •  HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction) This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.</description><subject>Alternative Splicing</subject><subject>Amino Acid Sequence</subject><subject>Amino acids</subject><subject>Animals</subject><subject>Blotting, Western</subject><subject>Cell Nucleus - genetics</subject><subject>Cercopithecus aethiops</subject><subject>Chromatin</subject><subject>Chromatin - metabolism</subject><subject>chromatin binding</subject><subject>COS Cells</subject><subject>Fluorescent Antibody Technique</subject><subject>Intercellular Signaling Peptides and Proteins - genetics</subject><subject>Intercellular Signaling Peptides and Proteins - metabolism</subject><subject>Mice</subject><subject>Molecular biology</subject><subject>Molecular Sequence Data</subject><subject>N‐terminal processing</subject><subject>phosphorylation</subject><subject>Protein Isoforms</subject><subject>Protein Multimerization</subject><subject>Proteins</subject><subject>PWWP domain</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>RNA, Messenger - genetics</subject><subject>Sequence Homology, Amino Acid</subject><subject>Spindle Apparatus - physiology</subject><issn>1742-464X</issn><issn>1742-4658</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkMtKAzEUhoMo3l9BghtXHXNy62QjaLVWEBQv4C6k08SmdCY1mWLd-Qg-o0_ijNUuXHk250C-_yd8CGEgGTRzPMmgy2mHS5FnlABkJOeSZ4s1tL16WF_d_GkL7aQ0IYQJrtQm2qKUAhUk30YPV1VtoylqHyocHB7c3X6-f1DsU3Ahlgm_-nqMB-eX_Qz3xjGUpvYVHvpq5KvnNmBwmtnCO1_gsW2qQmnjHtpwZprs_s_eRY_9i4feoHN9c3nVO73uFExJ3hHFCECownHDiZCKiy7Lh8YwB9wRKp0VTJJhbiSAs0Acy0FYwaUSrKEE20VHy95ZDC9zm2pd-lTY6dRUNsyTVpR2RRe-ycM_5CTMY9V8roWYAgWygfIlVMSQUrROz6IvTXzTQHTrXU90q1S3enXrXX9714smevDTPx-WdrQK_opugJMl8Oqn9u3fxbp_cXbfnuwLXXSPqw</recordid><startdate>201203</startdate><enddate>201203</enddate><creator>Thakar, Ketan</creator><creator>Votteler, Ina</creator><creator>Kelkar, Dipti</creator><creator>Shidore, Teja</creator><creator>Gupta, Shivangi</creator><creator>Kelm, Sørge</creator><creator>Dietz, Frank</creator><general>Blackwell Publishing Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201203</creationdate><title>Interaction of HRP‐2 isoforms with HDGF. 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Chromatin binding of a specific heteromer</atitle><jtitle>The FEBS journal</jtitle><addtitle>FEBS J</addtitle><date>2012-03</date><risdate>2012</risdate><volume>279</volume><issue>5</issue><spage>737</spage><epage>751</epage><pages>737-751</pages><issn>1742-464X</issn><eissn>1742-4658</eissn><abstract>Hepatoma‐derived growth‐factor‐related protein 2 (HRP‐2) belongs to a family with five additional members: hepatoma‐derived growth factor (HDGF); lens epithelium‐derived growth factor; and the HDGF‐related proteins ‐1, ‐3 and ‐4. Very little is known regarding the function of HRP‐2 in particular. This study shows for the first time heteromer formation of different members of the HRP family; HDGF and HRP‐2. In addition, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53‐amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF probably because of the loss of an α helix of HRP‐2. Furthermore, in contrast to other isoforms of HRP‐2, isoform c binds to chromatin similar to its most closely related family member lens epithelium‐derived growth factor with potential consequences regarding its function in HIV integration. Interestingly, only the new HRP‐2 isoform c and a processed form of HDGF are displaced from condensed mitotic metaphase chromatin. In conclusion, these observations provide a new perspective for understanding the biological functions of HDGF and related proteins. Structured digital •  HRP2 a and Hdgf physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 a and Hdgf colocalize by fluorescence microscopy (View interaction) •  HRP2 b physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c physically interact by bimolecular fluorescence complementation (View interaction) •  Hdgf and HRP2 b colocalize by fluorescence microscopy (View interaction) •  HRP2 a physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 b physically interact by bimolecular fluorescence complementation (View interaction) •  HRP2 c physically interacts with Hdgf by pull down (View Interaction: 1, 2) •  Hdgf and HRP2 c colocalize by fluorescence microscopy (View interaction) This study shows for the first time heteromer formation of different members of the hepatoma‐derived growth‐factor‐related protein 2 (HRP) family ‐ HDGF and HRP‐2. Additionally, we discovered a previously unknown splice variant of HRP‐2 mRNA encoding for a protein with a 53 amino acid deletion in its hath region. This HRP‐2 isoform c interacts preferentially with a processed form of HDGF.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>22212508</pmid><doi>10.1111/j.1742-4658.2011.08464.x</doi><tpages>15</tpages></addata></record>
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subjects Alternative Splicing
Amino Acid Sequence
Amino acids
Animals
Blotting, Western
Cell Nucleus - genetics
Cercopithecus aethiops
Chromatin
Chromatin - metabolism
chromatin binding
COS Cells
Fluorescent Antibody Technique
Intercellular Signaling Peptides and Proteins - genetics
Intercellular Signaling Peptides and Proteins - metabolism
Mice
Molecular biology
Molecular Sequence Data
N‐terminal processing
phosphorylation
Protein Isoforms
Protein Multimerization
Proteins
PWWP domain
Recombinant Proteins - genetics
Recombinant Proteins - metabolism
RNA, Messenger - genetics
Sequence Homology, Amino Acid
Spindle Apparatus - physiology
title Interaction of HRP‐2 isoforms with HDGF. Chromatin binding of a specific heteromer
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