Properties of BoAGE2, a second N-acetyl-d-glucosamine 2-epimerase from Bacteroides ovatus ATCC 8483
N-Acyl-d-Glucosamine 2-epimerase (AGE) catalyzes the reversible epimerization between N-acetyl-d-mannosamine (ManNAc) and N-acetyl-d-glucosamine (GlcNAc). Bacteroides ovatus ATCC 8483 shows 3 putative genes for AGE activity (BACOVA_00274, BACOVA_01795 and BACOVA_01816). The BACOVA_00274 gene encodes...
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description | N-Acyl-d-Glucosamine 2-epimerase (AGE) catalyzes the reversible epimerization between N-acetyl-d-mannosamine (ManNAc) and N-acetyl-d-glucosamine (GlcNAc). Bacteroides ovatus ATCC 8483 shows 3 putative genes for AGE activity (BACOVA_00274, BACOVA_01795 and BACOVA_01816). The BACOVA_00274 gene encodes an AGE (BoAGE1) with strong similarity to the AGE previously characterized in Bacteroides fragilis. Interestingly, the BACOVA_01816 gene (BoAGE2) shares 57% identity with Anabaena sp. CH1 AGE, but has an extra 27-amino acid tag sequence in the N-terminal. When cloned and expressed in Escherichia coli Rosetta (DE3)pLys, BACOVA_01816 was able to convert ManNAc into GlcNAc and vice versa. It was stable over a broad range of pHs and its activity was enhanced by ATP (20 μM). The incubation with ATP stabilized its structure, raising its melting temperature by about 8 °C. In addition, the catalytic efficiency for ManNAc synthesis was higher than that for GlcNAc synthesis. These characteristics make BoAGE2 a promising biocatalyst for sialic acid production using cheap GlcNAc as starting material. BoAGE2 could be considered a Renin-binding Protein and its interaction with renin was studied for the first time in a prokaryotic AGE. Surprisingly, renin activated BoAGE2, an effect which is contrary to that described for mammalian AGE and unrelated with the unique N-terminal tag, since a mutant without this tag was also activated by renin. When BoAGE2 sequence was compared with other related (real and putative) AGE described in the databases, it was seen that AGE enzymes can be divided in 3 different groups. The relationship between these groups is also discussed.
► First non-photosynthetic N-acetyl-d-glucosamine 2-epimerase (AGE) characterized with a unique 27-amino acid N-ter tag. ► First bacterial AGE reported as a Renin-binding Protein. ► This enzyme is activated by renin, while all eukaryotic AGE are inhibited. ► The phylogenetic origin of AGE is analyzed, and subdivided into 3 main subgroups. |
doi_str_mv | 10.1016/j.biochi.2011.10.012 |
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► First non-photosynthetic N-acetyl-d-glucosamine 2-epimerase (AGE) characterized with a unique 27-amino acid N-ter tag. ► First bacterial AGE reported as a Renin-binding Protein. ► This enzyme is activated by renin, while all eukaryotic AGE are inhibited. ► The phylogenetic origin of AGE is analyzed, and subdivided into 3 main subgroups.</description><identifier>ISSN: 0300-9084</identifier><identifier>EISSN: 1638-6183</identifier><identifier>DOI: 10.1016/j.biochi.2011.10.012</identifier><identifier>PMID: 22051376</identifier><language>eng</language><publisher>France: Elsevier B.V</publisher><subject>AGE ; Amino Acid Sequence ; Anabaena ; ATP ; Bacteroides - enzymology ; Bacteroides fragilis ; Bacteroides ovatus ; Base Sequence ; Carbohydrate Epimerases - chemistry ; Carbohydrate Epimerases - metabolism ; Carrier Proteins - chemistry ; Carrier Proteins - metabolism ; DNA Primers ; Electrophoresis, Polyacrylamide Gel ; Escherichia coli ; Kinetics ; Models, Molecular ; Molecular Sequence Data ; N-Acetyl-d-glucosamine 2-epimerase ; Polymerase Chain Reaction ; Renin ; Renin - metabolism ; Sequence Homology, Amino Acid ; Sialic acid synthesis</subject><ispartof>Biochimie, 2012-01, Vol.94 (1), p.222-230</ispartof><rights>2011 Elsevier Masson SAS</rights><rights>Copyright © 2011 Elsevier Masson SAS. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c393t-22ff883190f21025bb74468d0466a6de84aab9da7f4dadd4d5437c6d96bf8f453</citedby><cites>FETCH-LOGICAL-c393t-22ff883190f21025bb74468d0466a6de84aab9da7f4dadd4d5437c6d96bf8f453</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.biochi.2011.10.012$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/22051376$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sola-Carvajal, Agustín</creatorcontrib><creatorcontrib>Sánchez-Carrón, Guiomar</creatorcontrib><creatorcontrib>García-García, María Inmaculada</creatorcontrib><creatorcontrib>García-Carmona, Francisco</creatorcontrib><creatorcontrib>Sánchez-Ferrer, Álvaro</creatorcontrib><title>Properties of BoAGE2, a second N-acetyl-d-glucosamine 2-epimerase from Bacteroides ovatus ATCC 8483</title><title>Biochimie</title><addtitle>Biochimie</addtitle><description>N-Acyl-d-Glucosamine 2-epimerase (AGE) catalyzes the reversible epimerization between N-acetyl-d-mannosamine (ManNAc) and N-acetyl-d-glucosamine (GlcNAc). Bacteroides ovatus ATCC 8483 shows 3 putative genes for AGE activity (BACOVA_00274, BACOVA_01795 and BACOVA_01816). The BACOVA_00274 gene encodes an AGE (BoAGE1) with strong similarity to the AGE previously characterized in Bacteroides fragilis. Interestingly, the BACOVA_01816 gene (BoAGE2) shares 57% identity with Anabaena sp. CH1 AGE, but has an extra 27-amino acid tag sequence in the N-terminal. When cloned and expressed in Escherichia coli Rosetta (DE3)pLys, BACOVA_01816 was able to convert ManNAc into GlcNAc and vice versa. It was stable over a broad range of pHs and its activity was enhanced by ATP (20 μM). The incubation with ATP stabilized its structure, raising its melting temperature by about 8 °C. In addition, the catalytic efficiency for ManNAc synthesis was higher than that for GlcNAc synthesis. These characteristics make BoAGE2 a promising biocatalyst for sialic acid production using cheap GlcNAc as starting material. BoAGE2 could be considered a Renin-binding Protein and its interaction with renin was studied for the first time in a prokaryotic AGE. Surprisingly, renin activated BoAGE2, an effect which is contrary to that described for mammalian AGE and unrelated with the unique N-terminal tag, since a mutant without this tag was also activated by renin. When BoAGE2 sequence was compared with other related (real and putative) AGE described in the databases, it was seen that AGE enzymes can be divided in 3 different groups. The relationship between these groups is also discussed.
► First non-photosynthetic N-acetyl-d-glucosamine 2-epimerase (AGE) characterized with a unique 27-amino acid N-ter tag. ► First bacterial AGE reported as a Renin-binding Protein. ► This enzyme is activated by renin, while all eukaryotic AGE are inhibited. ► The phylogenetic origin of AGE is analyzed, and subdivided into 3 main subgroups.</description><subject>AGE</subject><subject>Amino Acid Sequence</subject><subject>Anabaena</subject><subject>ATP</subject><subject>Bacteroides - enzymology</subject><subject>Bacteroides fragilis</subject><subject>Bacteroides ovatus</subject><subject>Base Sequence</subject><subject>Carbohydrate Epimerases - chemistry</subject><subject>Carbohydrate Epimerases - metabolism</subject><subject>Carrier Proteins - chemistry</subject><subject>Carrier Proteins - metabolism</subject><subject>DNA Primers</subject><subject>Electrophoresis, Polyacrylamide Gel</subject><subject>Escherichia coli</subject><subject>Kinetics</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>N-Acetyl-d-glucosamine 2-epimerase</subject><subject>Polymerase Chain Reaction</subject><subject>Renin</subject><subject>Renin - metabolism</subject><subject>Sequence Homology, Amino Acid</subject><subject>Sialic acid synthesis</subject><issn>0300-9084</issn><issn>1638-6183</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU-LFDEUxIMo7rj6DURy82LGlz-dSS7C7LCuwqIe1nNIJy-aoXsyJt0L--3tYVaP4ulB8asqeEXIaw5rDly_36_7XMLPvBbA-SKtgYsnZMW1NExzI5-SFUgAZsGoC_KitT0AdCDsc3IhBHRcbvSKhG-1HLFOGRstiV6V7c21eEc9bRjKIdIvzAecHgYW2Y9hDqX5MR-QCobHPGL1DWmqZaRXPkxYS46nnHs_zY1u73Y7apSRL8mz5IeGrx7vJfn-8fpu94ndfr35vNvesiCtnJgQKRkjuYUkOIiu7zdKaRNBae11RKO87230m6Sij1HFTslN0NHqPpmkOnlJ3p5zj7X8mrFNbswt4DD4A5a5OcsNaCXs_5DcdqCFXkh1JkMtrVVM7ljz6OuD4-BOO7i9O-_gTjuc1GWHxfbmsWDuR4x_TX8evwAfzgAuD7nPWF0LGQ8BY64YJhdL_nfDb_7FmK8</recordid><startdate>201201</startdate><enddate>201201</enddate><creator>Sola-Carvajal, Agustín</creator><creator>Sánchez-Carrón, Guiomar</creator><creator>García-García, María Inmaculada</creator><creator>García-Carmona, Francisco</creator><creator>Sánchez-Ferrer, Álvaro</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>201201</creationdate><title>Properties of BoAGE2, a second N-acetyl-d-glucosamine 2-epimerase from Bacteroides ovatus ATCC 8483</title><author>Sola-Carvajal, Agustín ; Sánchez-Carrón, Guiomar ; García-García, María Inmaculada ; García-Carmona, Francisco ; Sánchez-Ferrer, Álvaro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c393t-22ff883190f21025bb74468d0466a6de84aab9da7f4dadd4d5437c6d96bf8f453</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>AGE</topic><topic>Amino Acid Sequence</topic><topic>Anabaena</topic><topic>ATP</topic><topic>Bacteroides - enzymology</topic><topic>Bacteroides fragilis</topic><topic>Bacteroides ovatus</topic><topic>Base Sequence</topic><topic>Carbohydrate Epimerases - chemistry</topic><topic>Carbohydrate Epimerases - metabolism</topic><topic>Carrier Proteins - chemistry</topic><topic>Carrier Proteins - metabolism</topic><topic>DNA Primers</topic><topic>Electrophoresis, Polyacrylamide Gel</topic><topic>Escherichia coli</topic><topic>Kinetics</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>N-Acetyl-d-glucosamine 2-epimerase</topic><topic>Polymerase Chain Reaction</topic><topic>Renin</topic><topic>Renin - metabolism</topic><topic>Sequence Homology, Amino Acid</topic><topic>Sialic acid synthesis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sola-Carvajal, Agustín</creatorcontrib><creatorcontrib>Sánchez-Carrón, Guiomar</creatorcontrib><creatorcontrib>García-García, María Inmaculada</creatorcontrib><creatorcontrib>García-Carmona, Francisco</creatorcontrib><creatorcontrib>Sánchez-Ferrer, Álvaro</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Biochimie</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sola-Carvajal, Agustín</au><au>Sánchez-Carrón, Guiomar</au><au>García-García, María Inmaculada</au><au>García-Carmona, Francisco</au><au>Sánchez-Ferrer, Álvaro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Properties of BoAGE2, a second N-acetyl-d-glucosamine 2-epimerase from Bacteroides ovatus ATCC 8483</atitle><jtitle>Biochimie</jtitle><addtitle>Biochimie</addtitle><date>2012-01</date><risdate>2012</risdate><volume>94</volume><issue>1</issue><spage>222</spage><epage>230</epage><pages>222-230</pages><issn>0300-9084</issn><eissn>1638-6183</eissn><abstract>N-Acyl-d-Glucosamine 2-epimerase (AGE) catalyzes the reversible epimerization between N-acetyl-d-mannosamine (ManNAc) and N-acetyl-d-glucosamine (GlcNAc). Bacteroides ovatus ATCC 8483 shows 3 putative genes for AGE activity (BACOVA_00274, BACOVA_01795 and BACOVA_01816). The BACOVA_00274 gene encodes an AGE (BoAGE1) with strong similarity to the AGE previously characterized in Bacteroides fragilis. Interestingly, the BACOVA_01816 gene (BoAGE2) shares 57% identity with Anabaena sp. CH1 AGE, but has an extra 27-amino acid tag sequence in the N-terminal. When cloned and expressed in Escherichia coli Rosetta (DE3)pLys, BACOVA_01816 was able to convert ManNAc into GlcNAc and vice versa. It was stable over a broad range of pHs and its activity was enhanced by ATP (20 μM). The incubation with ATP stabilized its structure, raising its melting temperature by about 8 °C. In addition, the catalytic efficiency for ManNAc synthesis was higher than that for GlcNAc synthesis. These characteristics make BoAGE2 a promising biocatalyst for sialic acid production using cheap GlcNAc as starting material. BoAGE2 could be considered a Renin-binding Protein and its interaction with renin was studied for the first time in a prokaryotic AGE. Surprisingly, renin activated BoAGE2, an effect which is contrary to that described for mammalian AGE and unrelated with the unique N-terminal tag, since a mutant without this tag was also activated by renin. When BoAGE2 sequence was compared with other related (real and putative) AGE described in the databases, it was seen that AGE enzymes can be divided in 3 different groups. The relationship between these groups is also discussed.
► First non-photosynthetic N-acetyl-d-glucosamine 2-epimerase (AGE) characterized with a unique 27-amino acid N-ter tag. ► First bacterial AGE reported as a Renin-binding Protein. ► This enzyme is activated by renin, while all eukaryotic AGE are inhibited. ► The phylogenetic origin of AGE is analyzed, and subdivided into 3 main subgroups.</abstract><cop>France</cop><pub>Elsevier B.V</pub><pmid>22051376</pmid><doi>10.1016/j.biochi.2011.10.012</doi><tpages>9</tpages></addata></record> |
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subjects | AGE Amino Acid Sequence Anabaena ATP Bacteroides - enzymology Bacteroides fragilis Bacteroides ovatus Base Sequence Carbohydrate Epimerases - chemistry Carbohydrate Epimerases - metabolism Carrier Proteins - chemistry Carrier Proteins - metabolism DNA Primers Electrophoresis, Polyacrylamide Gel Escherichia coli Kinetics Models, Molecular Molecular Sequence Data N-Acetyl-d-glucosamine 2-epimerase Polymerase Chain Reaction Renin Renin - metabolism Sequence Homology, Amino Acid Sialic acid synthesis |
title | Properties of BoAGE2, a second N-acetyl-d-glucosamine 2-epimerase from Bacteroides ovatus ATCC 8483 |
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