Predicting the Distribution and Ecological Niche of Unexploited Snow Crab (Chionoecetes opilio) Populations in Alaskan Waters: A First Open-Access Ensemble Model
Populations of the snow crab (Chionoecetes opilio) are widely distributed on high-latitude continental shelves of the North Pacific and North Atlantic, and represent a valuable resource in both the United States and Canada. In US waters, snow crabs are found throughout the Arctic and sub-Arctic seas...
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description | Populations of the snow crab (Chionoecetes opilio) are widely distributed on high-latitude continental shelves of the North Pacific and North Atlantic, and represent a valuable resource in both the United States and Canada. In US waters, snow crabs are found throughout the Arctic and sub-Arctic seas surrounding Alaska, north of the Aleutian Islands, yet commercial harvest currently focuses on the more southerly population in the Bering Sea. Population dynamics are well-monitored in exploited areas, but few data exist for populations further north where climate trends in the Arctic appear to be affecting species’ distributions and community structure on multiple trophic levels. Moreover, increased shipping traffic, as well as fisheries and petroleum resource development, may add additional pressures in northern portions of the range as seasonal ice cover continues to decline. In the face of these pressures, we examined the ecological niche and population distribution of snow crabs in Alaskan waters using a GIS-based spatial modeling approach. We present the first quantitative open-access model predictions of snow-crab distribution, abundance, and biomass in the Chukchi and Beaufort Seas. Multi-variate analysis of environmental drivers of species’ distribution and community structure commonly rely on multiple linear regression methods. The spatial modeling approach employed here improves upon linear regression methods in allowing for exploration of nonlinear relationships and interactions between variables. Three machine-learning algorithms were used to evaluate relationships between snow-crab distribution and environmental parameters, including TreeNet, Random Forests, and MARS. An ensemble model was then generated by combining output from these three models to generate consensus predictions for presence–absence, abundance, and biomass of snow crabs. Each algorithm identified a suite of variables most important in predicting snow-crab distribution, including nutrient and chlorophyll-a concentrations in overlying waters, temperature, salinity, and annual sea-ice cover; this information may be used to develop and test hypotheses regarding the ecology of this species. This is the first such quantitative model for snow crabs, and all GIS-data layers compiled for this project are freely available from the authors, upon request, for public use and improvement. |
doi_str_mv | 10.1093/icb/icr102 |
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In US waters, snow crabs are found throughout the Arctic and sub-Arctic seas surrounding Alaska, north of the Aleutian Islands, yet commercial harvest currently focuses on the more southerly population in the Bering Sea. Population dynamics are well-monitored in exploited areas, but few data exist for populations further north where climate trends in the Arctic appear to be affecting species’ distributions and community structure on multiple trophic levels. Moreover, increased shipping traffic, as well as fisheries and petroleum resource development, may add additional pressures in northern portions of the range as seasonal ice cover continues to decline. In the face of these pressures, we examined the ecological niche and population distribution of snow crabs in Alaskan waters using a GIS-based spatial modeling approach. We present the first quantitative open-access model predictions of snow-crab distribution, abundance, and biomass in the Chukchi and Beaufort Seas. Multi-variate analysis of environmental drivers of species’ distribution and community structure commonly rely on multiple linear regression methods. The spatial modeling approach employed here improves upon linear regression methods in allowing for exploration of nonlinear relationships and interactions between variables. Three machine-learning algorithms were used to evaluate relationships between snow-crab distribution and environmental parameters, including TreeNet, Random Forests, and MARS. An ensemble model was then generated by combining output from these three models to generate consensus predictions for presence–absence, abundance, and biomass of snow crabs. Each algorithm identified a suite of variables most important in predicting snow-crab distribution, including nutrient and chlorophyll-a concentrations in overlying waters, temperature, salinity, and annual sea-ice cover; this information may be used to develop and test hypotheses regarding the ecology of this species. This is the first such quantitative model for snow crabs, and all GIS-data layers compiled for this project are freely available from the authors, upon request, for public use and improvement.</description><identifier>ISSN: 1540-7063</identifier><identifier>EISSN: 1557-7023</identifier><identifier>DOI: 10.1093/icb/icr102</identifier><identifier>PMID: 21873643</identifier><language>eng</language><publisher>England: Oxford University Press</publisher><subject>Alaska ; algorithms ; animal ecology ; Animal populations ; Animals ; Arctic Regions ; Artificial intelligence ; Biomass ; Brachyura - physiology ; Chionoecetes opilio ; Chlorophyll ; climate ; community structure ; Crabs ; Crustaceans ; Decapoda ; Ecological modeling ; Environment ; environmental assessment ; environmental factors ; fisheries ; Fisheries management ; Geographic Information Systems ; ice ; latitude ; linear models ; Marine ; Modeling ; Models, Biological ; multivariate analysis ; niches ; petroleum ; Population Density ; population distribution ; Population Dynamics ; Population Dynamics of Crustaceans ; prediction ; Regression analysis ; salinity ; Seas ; Sediments ; shipping ; Snow ; Species ; temperature ; traffic ; trophic relationships ; World ocean</subject><ispartof>Integrative and comparative biology, 2011-10, Vol.51 (4), p.608-622</ispartof><rights>2011 The Society for Integrative and Comparative Biology</rights><rights>The Author 2011. Published by Oxford University Press on behalf of the Society for Integrative and Comparative Biology. All rights reserved. For permissions please email: journals.permissions@oup.com. 2011</rights><rights>Copyright Oxford Publishing Limited(England) Oct 2011</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c523t-401f852971c407add38cc831e36b8326f83f1208d2b11e99e49434cc41f7f7bc3</citedby><cites>FETCH-LOGICAL-c523t-401f852971c407add38cc831e36b8326f83f1208d2b11e99e49434cc41f7f7bc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/23016322$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/23016322$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,1584,27924,27925,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21873643$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hardy, Sarah M</creatorcontrib><creatorcontrib>Lindgren, Michael</creatorcontrib><creatorcontrib>Konakanchi, Hanumantharao</creatorcontrib><creatorcontrib>Huettmann, Falk</creatorcontrib><title>Predicting the Distribution and Ecological Niche of Unexploited Snow Crab (Chionoecetes opilio) Populations in Alaskan Waters: A First Open-Access Ensemble Model</title><title>Integrative and comparative biology</title><addtitle>Integr Comp Biol</addtitle><description>Populations of the snow crab (Chionoecetes opilio) are widely distributed on high-latitude continental shelves of the North Pacific and North Atlantic, and represent a valuable resource in both the United States and Canada. In US waters, snow crabs are found throughout the Arctic and sub-Arctic seas surrounding Alaska, north of the Aleutian Islands, yet commercial harvest currently focuses on the more southerly population in the Bering Sea. Population dynamics are well-monitored in exploited areas, but few data exist for populations further north where climate trends in the Arctic appear to be affecting species’ distributions and community structure on multiple trophic levels. Moreover, increased shipping traffic, as well as fisheries and petroleum resource development, may add additional pressures in northern portions of the range as seasonal ice cover continues to decline. In the face of these pressures, we examined the ecological niche and population distribution of snow crabs in Alaskan waters using a GIS-based spatial modeling approach. We present the first quantitative open-access model predictions of snow-crab distribution, abundance, and biomass in the Chukchi and Beaufort Seas. Multi-variate analysis of environmental drivers of species’ distribution and community structure commonly rely on multiple linear regression methods. The spatial modeling approach employed here improves upon linear regression methods in allowing for exploration of nonlinear relationships and interactions between variables. Three machine-learning algorithms were used to evaluate relationships between snow-crab distribution and environmental parameters, including TreeNet, Random Forests, and MARS. An ensemble model was then generated by combining output from these three models to generate consensus predictions for presence–absence, abundance, and biomass of snow crabs. Each algorithm identified a suite of variables most important in predicting snow-crab distribution, including nutrient and chlorophyll-a concentrations in overlying waters, temperature, salinity, and annual sea-ice cover; this information may be used to develop and test hypotheses regarding the ecology of this species. This is the first such quantitative model for snow crabs, and all GIS-data layers compiled for this project are freely available from the authors, upon request, for public use and improvement.</description><subject>Alaska</subject><subject>algorithms</subject><subject>animal ecology</subject><subject>Animal populations</subject><subject>Animals</subject><subject>Arctic Regions</subject><subject>Artificial intelligence</subject><subject>Biomass</subject><subject>Brachyura - physiology</subject><subject>Chionoecetes opilio</subject><subject>Chlorophyll</subject><subject>climate</subject><subject>community structure</subject><subject>Crabs</subject><subject>Crustaceans</subject><subject>Decapoda</subject><subject>Ecological modeling</subject><subject>Environment</subject><subject>environmental assessment</subject><subject>environmental factors</subject><subject>fisheries</subject><subject>Fisheries management</subject><subject>Geographic Information Systems</subject><subject>ice</subject><subject>latitude</subject><subject>linear models</subject><subject>Marine</subject><subject>Modeling</subject><subject>Models, Biological</subject><subject>multivariate analysis</subject><subject>niches</subject><subject>petroleum</subject><subject>Population Density</subject><subject>population distribution</subject><subject>Population Dynamics</subject><subject>Population Dynamics of Crustaceans</subject><subject>prediction</subject><subject>Regression analysis</subject><subject>salinity</subject><subject>Seas</subject><subject>Sediments</subject><subject>shipping</subject><subject>Snow</subject><subject>Species</subject><subject>temperature</subject><subject>traffic</subject><subject>trophic relationships</subject><subject>World ocean</subject><issn>1540-7063</issn><issn>1557-7023</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkl2L1DAUhoso7jp6470aBPEDqvlqm3g3jLMqrO7COnhZ0vR0NrOZpCYp6s_xn5qhq4IXehFy4H3ywOFNUdwn-CXBkr0yussnEExvFMekqpqywZTdPMwc57lmR8WdGHcY5xCT28URJaJhNWfHxY_zAL3RybgtSpeA3piYgummZLxDyvVorb31W6OVRR-NzoQf0MbBt9F6k6BHF85_RaugOvRsdZkfedCQICI_Gmv8c3Tux8mqgy4i49DSqnilHPqsEoT4Gi3RiQkxobMRXLnUGmJEaxdh31lAH3wP9m5xa1A2wr3re1FsTtafVu_K07O371fL01JXlKWSYzKIisqGaI4b1fdMaC0YAVZ3gtF6EGwgFIuedoSAlMAlZ1xrToZmaDrNFsXT2TsG_2WCmNq9iRqsVQ78FFtJBK4Jl81_SSGZFELmahbF47_InZ-Cy2u0ErOKsJriDL2YIR18jAGGdgxmr8L3luD2UHCbC27ngjP88No4dXvof6O_Gs3Akxnw0_hv0YOZ28Xkwx8Pw6Rm9JA_mvNB-VZtg4nt5oLmMP8iLHne8Sd7qcDj</recordid><startdate>20111001</startdate><enddate>20111001</enddate><creator>Hardy, Sarah M</creator><creator>Lindgren, Michael</creator><creator>Konakanchi, Hanumantharao</creator><creator>Huettmann, Falk</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TK</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope><scope>7TN</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>20111001</creationdate><title>Predicting the Distribution and Ecological Niche of Unexploited Snow Crab (Chionoecetes opilio) Populations in Alaskan Waters: A First Open-Access Ensemble Model</title><author>Hardy, Sarah M ; 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In US waters, snow crabs are found throughout the Arctic and sub-Arctic seas surrounding Alaska, north of the Aleutian Islands, yet commercial harvest currently focuses on the more southerly population in the Bering Sea. Population dynamics are well-monitored in exploited areas, but few data exist for populations further north where climate trends in the Arctic appear to be affecting species’ distributions and community structure on multiple trophic levels. Moreover, increased shipping traffic, as well as fisheries and petroleum resource development, may add additional pressures in northern portions of the range as seasonal ice cover continues to decline. In the face of these pressures, we examined the ecological niche and population distribution of snow crabs in Alaskan waters using a GIS-based spatial modeling approach. We present the first quantitative open-access model predictions of snow-crab distribution, abundance, and biomass in the Chukchi and Beaufort Seas. Multi-variate analysis of environmental drivers of species’ distribution and community structure commonly rely on multiple linear regression methods. The spatial modeling approach employed here improves upon linear regression methods in allowing for exploration of nonlinear relationships and interactions between variables. Three machine-learning algorithms were used to evaluate relationships between snow-crab distribution and environmental parameters, including TreeNet, Random Forests, and MARS. An ensemble model was then generated by combining output from these three models to generate consensus predictions for presence–absence, abundance, and biomass of snow crabs. Each algorithm identified a suite of variables most important in predicting snow-crab distribution, including nutrient and chlorophyll-a concentrations in overlying waters, temperature, salinity, and annual sea-ice cover; this information may be used to develop and test hypotheses regarding the ecology of this species. This is the first such quantitative model for snow crabs, and all GIS-data layers compiled for this project are freely available from the authors, upon request, for public use and improvement.</abstract><cop>England</cop><pub>Oxford University Press</pub><pmid>21873643</pmid><doi>10.1093/icb/icr102</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alaska algorithms animal ecology Animal populations Animals Arctic Regions Artificial intelligence Biomass Brachyura - physiology Chionoecetes opilio Chlorophyll climate community structure Crabs Crustaceans Decapoda Ecological modeling Environment environmental assessment environmental factors fisheries Fisheries management Geographic Information Systems ice latitude linear models Marine Modeling Models, Biological multivariate analysis niches petroleum Population Density population distribution Population Dynamics Population Dynamics of Crustaceans prediction Regression analysis salinity Seas Sediments shipping Snow Species temperature traffic trophic relationships World ocean |
title | Predicting the Distribution and Ecological Niche of Unexploited Snow Crab (Chionoecetes opilio) Populations in Alaskan Waters: A First Open-Access Ensemble Model |
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