Pedobacter rhizosphaerae sp. nov. and Pedobacter soli sp. nov., isolated from rhizosphere soil of Chinese cabbage (Brassica campestris)

Two bacterial strains, 01-96T and 15-51T, isolated from rhizosphere soil of Chinese cabbage (Brassica campestris) were characterized by using a polyphasic approach. 16S rRNA gene sequence analysis showed that strain 01-96T was phylogenetically related most closely to Pedobacter suwonensis 15-52T and...

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Veröffentlicht in:	International journal of systematic and evolutionary microbiology 2011-12, Vol.61 (Pt 12), p.2874-2879
Hauptverfasser:	Kwon, Soon-Wo, Son, Jung-A, Kim, Soo-Jin, Kim, Yi-Seul, Park, In-Cheol, Bok, Jeung-Im, Weon, Hang-Yeon
Format:	Artikel
Sprache:	eng
Schlagworte:	Bacteriology Base Composition Biological and medical sciences Brassica - microbiology Brassica rapa subsp. campestris Chinese cabbage DNA DNA, Bacterial - genetics DNA, Ribosomal - genetics fatty acids Fatty Acids - metabolism Fundamental and applied biological sciences. Psychology genes Microbiology Molecular Sequence Data new species nucleic acid hybridization nucleotide sequences Pedobacter Pedobacter - classification Pedobacter - genetics Pedobacter - isolation & purification Pedobacter - metabolism Phylogeny Rhizosphere ribosomal RNA RNA, Ribosomal, 16S - genetics sequence analysis soil Soil Microbiology Systematics
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Zusammenfassung:	Two bacterial strains, 01-96T and 15-51T, isolated from rhizosphere soil of Chinese cabbage (Brassica campestris) were characterized by using a polyphasic approach. 16S rRNA gene sequence analysis showed that strain 01-96T was phylogenetically related most closely to Pedobacter suwonensis 15-52T and Pedobacter roseus CL-GP80T (96.7 and 96.7 % similarity, respectively), and strain 15-51T to Pedobacter borealis G-1T and P. suwonensis 15-52T (97.2 and 97.1 %, respectively). However, levels of DNA–DNA relatedness between strain 15-51T and P. borealis KACC 14287T and P. suwonensis KACC 11317T were low (
ISSN:	1466-5034 1466-5026 1466-5034
DOI:	10.1099/ijs.0.026781-0