Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste
The methanogenic pathway and microbial community in a thermophilic anaerobic digestion process of organic solid waste were investigated in a continuous-flow stirred-tank reactor using artificial garbage slurry as a feedstock. The decomposition pathway of acetate, a significant precursor of CH 4 and...
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creator | Sasaki, Daisuke Hori, Tomoyuki Haruta, Shin Ueno, Yoshiyuki Ishii, Masaharu Igarashi, Yasuo |
description | The methanogenic pathway and microbial community in a thermophilic anaerobic digestion process of organic solid waste were investigated in a continuous-flow stirred-tank reactor using artificial garbage slurry as a feedstock. The decomposition pathway of acetate, a significant precursor of CH
4 and a key intermediate metabolite in the anaerobic digestion process, was analyzed by using stable isotopes. A tracer experiment using
13C-labeled acetate revealed that approximately 80% of the acetate was decomposed via a non-aceticlastic oxidative pathway, whereas the remainder was converted to methane via an aceticlastic pathway. Archaeal 16S rRNA analyses demonstrated that the hydrogenotrophic methanogens
Methanoculleus spp. accounted for >
90% of detected methanogens, and the aceticlastic methanogens
Methanosarcina spp. were the minor constituents. The clone library targeting bacterial 16S rRNA indicated the predominance of the novel Thermotogales bacterium (relative abundance: ~
53%), which is related to anaerobic acetate oxidizer
Thermotoga lettingae TMO, although the sequence similarity was low. Uncultured bacteria that phylogenetically belong to municipal solid waste cluster I were also predominant in the microflora (~
30%). These results imply that the microbial community in the thermophilic degrading process of organic solid waste consists exclusively of unidentified bacteria, which efficiently remove acetate through a non-aceticlastic oxidative pathway. |
doi_str_mv | 10.1016/j.jbiosc.2010.08.011 |
format | Article |
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4 and a key intermediate metabolite in the anaerobic digestion process, was analyzed by using stable isotopes. A tracer experiment using
13C-labeled acetate revealed that approximately 80% of the acetate was decomposed via a non-aceticlastic oxidative pathway, whereas the remainder was converted to methane via an aceticlastic pathway. Archaeal 16S rRNA analyses demonstrated that the hydrogenotrophic methanogens
Methanoculleus spp. accounted for >
90% of detected methanogens, and the aceticlastic methanogens
Methanosarcina spp. were the minor constituents. The clone library targeting bacterial 16S rRNA indicated the predominance of the novel Thermotogales bacterium (relative abundance: ~
53%), which is related to anaerobic acetate oxidizer
Thermotoga lettingae TMO, although the sequence similarity was low. Uncultured bacteria that phylogenetically belong to municipal solid waste cluster I were also predominant in the microflora (~
30%). These results imply that the microbial community in the thermophilic degrading process of organic solid waste consists exclusively of unidentified bacteria, which efficiently remove acetate through a non-aceticlastic oxidative pathway.</description><identifier>ISSN: 1389-1723</identifier><identifier>EISSN: 1347-4421</identifier><identifier>DOI: 10.1016/j.jbiosc.2010.08.011</identifier><identifier>PMID: 20851673</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Acetates - metabolism ; Anaerobiosis ; Bacteria - classification ; Bacteria - genetics ; Bacteria - metabolism ; Biological and medical sciences ; Bioreactors ; Bioreactors - microbiology ; Biotechnology ; Carbon Isotopes - metabolism ; Euryarchaeota - classification ; Euryarchaeota - genetics ; Euryarchaeota - metabolism ; Fundamental and applied biological sciences. Psychology ; Methane - metabolism ; Methanoculleus ; Methanogenic pathway ; Methanosarcina ; Methods. Procedures. Technologies ; Microbial community structure ; Organic solid waste ; Phylogeny ; RNA, Archaeal - genetics ; RNA, Bacterial - genetics ; RNA, Ribosomal, 16S - genetics ; Sewage - microbiology ; Thermophilic methanogenic bioreactor ; Thermotoga lettingae ; Thermotogales ; Various methods and equipments</subject><ispartof>Journal of bioscience and bioengineering, 2011, Vol.111 (1), p.41-46</ispartof><rights>2010 The Society for Biotechnology, Japan</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2010 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c590t-fff7e9144a82e9d2dfded41253808b0f68c452a20c82805bc1747538435a78123</citedby><cites>FETCH-LOGICAL-c590t-fff7e9144a82e9d2dfded41253808b0f68c452a20c82805bc1747538435a78123</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S138917231000280X$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,4010,27900,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23835822$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20851673$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sasaki, Daisuke</creatorcontrib><creatorcontrib>Hori, Tomoyuki</creatorcontrib><creatorcontrib>Haruta, Shin</creatorcontrib><creatorcontrib>Ueno, Yoshiyuki</creatorcontrib><creatorcontrib>Ishii, Masaharu</creatorcontrib><creatorcontrib>Igarashi, Yasuo</creatorcontrib><title>Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste</title><title>Journal of bioscience and bioengineering</title><addtitle>J Biosci Bioeng</addtitle><description>The methanogenic pathway and microbial community in a thermophilic anaerobic digestion process of organic solid waste were investigated in a continuous-flow stirred-tank reactor using artificial garbage slurry as a feedstock. The decomposition pathway of acetate, a significant precursor of CH
4 and a key intermediate metabolite in the anaerobic digestion process, was analyzed by using stable isotopes. A tracer experiment using
13C-labeled acetate revealed that approximately 80% of the acetate was decomposed via a non-aceticlastic oxidative pathway, whereas the remainder was converted to methane via an aceticlastic pathway. Archaeal 16S rRNA analyses demonstrated that the hydrogenotrophic methanogens
Methanoculleus spp. accounted for >
90% of detected methanogens, and the aceticlastic methanogens
Methanosarcina spp. were the minor constituents. The clone library targeting bacterial 16S rRNA indicated the predominance of the novel Thermotogales bacterium (relative abundance: ~
53%), which is related to anaerobic acetate oxidizer
Thermotoga lettingae TMO, although the sequence similarity was low. Uncultured bacteria that phylogenetically belong to municipal solid waste cluster I were also predominant in the microflora (~
30%). These results imply that the microbial community in the thermophilic degrading process of organic solid waste consists exclusively of unidentified bacteria, which efficiently remove acetate through a non-aceticlastic oxidative pathway.</description><subject>Acetates - metabolism</subject><subject>Anaerobiosis</subject><subject>Bacteria - classification</subject><subject>Bacteria - genetics</subject><subject>Bacteria - metabolism</subject><subject>Biological and medical sciences</subject><subject>Bioreactors</subject><subject>Bioreactors - microbiology</subject><subject>Biotechnology</subject><subject>Carbon Isotopes - metabolism</subject><subject>Euryarchaeota - classification</subject><subject>Euryarchaeota - genetics</subject><subject>Euryarchaeota - metabolism</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Methane - metabolism</subject><subject>Methanoculleus</subject><subject>Methanogenic pathway</subject><subject>Methanosarcina</subject><subject>Methods. Procedures. Technologies</subject><subject>Microbial community structure</subject><subject>Organic solid waste</subject><subject>Phylogeny</subject><subject>RNA, Archaeal - genetics</subject><subject>RNA, Bacterial - genetics</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sewage - microbiology</subject><subject>Thermophilic methanogenic bioreactor</subject><subject>Thermotoga lettingae</subject><subject>Thermotogales</subject><subject>Various methods and equipments</subject><issn>1389-1723</issn><issn>1347-4421</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkUuPFCEUhStG44yj_8AoG-OqWl7VUBuTycRXMsaFzppQcOmmUwU9QDnpfy-VanWnK27gO_ce7mmalwRvCCbbd4fNYfAxmw3F9QrLDSbkUXNJGBct55Q8XmrZt0RQdtE8y_mAMRFYkKfNBcWyI1vBLpv7r1D2OsQdBG_QUZf9gz4hHSwycZrm4MsJ5ZJmU-YEyAekUdlDmuJx78eq0EFDikOtrN9BLj4GdEzRQM4oOhTTTi-Ncxy9RQ86F3jePHF6zPDifF41dx8__Lj53N5--_Tl5vq2NV2PS-ucE9ATzrWk0FtqnQXLCe2YxHLAbisN76im2EgqcTcYIrioj5x1WkhC2VXzdu1b7dzP1ZqafDYwjjpAnLPq6yo6TBj5LymZ4B0XrK8kX0mTYs4JnDomP-l0UgSrJRV1UGsqaklFYalqKlX26jxgHiawf0S_Y6jAmzOgs9GjSzoYn_9yTLJO0uVPr1fO6aj0LlXm7nudxDDp6ZZtF-L9SkBd7U8PSWXjIRiwPoEpykb_b6-_AIUYtsM</recordid><startdate>2011</startdate><enddate>2011</enddate><creator>Sasaki, Daisuke</creator><creator>Hori, Tomoyuki</creator><creator>Haruta, Shin</creator><creator>Ueno, Yoshiyuki</creator><creator>Ishii, Masaharu</creator><creator>Igarashi, Yasuo</creator><general>Elsevier B.V</general><general>Osaka, Japan: Society for Bioscience and Bioengineering, Japan; Amsterdam, the Netherlands: Distributed outside Japan by Elsevier Science</general><general>Elsevier</general><scope>FBQ</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>2011</creationdate><title>Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste</title><author>Sasaki, Daisuke ; Hori, Tomoyuki ; Haruta, Shin ; Ueno, Yoshiyuki ; Ishii, Masaharu ; Igarashi, Yasuo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c590t-fff7e9144a82e9d2dfded41253808b0f68c452a20c82805bc1747538435a78123</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Acetates - metabolism</topic><topic>Anaerobiosis</topic><topic>Bacteria - classification</topic><topic>Bacteria - genetics</topic><topic>Bacteria - metabolism</topic><topic>Biological and medical sciences</topic><topic>Bioreactors</topic><topic>Bioreactors - microbiology</topic><topic>Biotechnology</topic><topic>Carbon Isotopes - metabolism</topic><topic>Euryarchaeota - classification</topic><topic>Euryarchaeota - genetics</topic><topic>Euryarchaeota - metabolism</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Methane - metabolism</topic><topic>Methanoculleus</topic><topic>Methanogenic pathway</topic><topic>Methanosarcina</topic><topic>Methods. Procedures. Technologies</topic><topic>Microbial community structure</topic><topic>Organic solid waste</topic><topic>Phylogeny</topic><topic>RNA, Archaeal - genetics</topic><topic>RNA, Bacterial - genetics</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sewage - microbiology</topic><topic>Thermophilic methanogenic bioreactor</topic><topic>Thermotoga lettingae</topic><topic>Thermotogales</topic><topic>Various methods and equipments</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sasaki, Daisuke</creatorcontrib><creatorcontrib>Hori, Tomoyuki</creatorcontrib><creatorcontrib>Haruta, Shin</creatorcontrib><creatorcontrib>Ueno, Yoshiyuki</creatorcontrib><creatorcontrib>Ishii, Masaharu</creatorcontrib><creatorcontrib>Igarashi, Yasuo</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of bioscience and bioengineering</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sasaki, Daisuke</au><au>Hori, Tomoyuki</au><au>Haruta, Shin</au><au>Ueno, Yoshiyuki</au><au>Ishii, Masaharu</au><au>Igarashi, Yasuo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste</atitle><jtitle>Journal of bioscience and bioengineering</jtitle><addtitle>J Biosci Bioeng</addtitle><date>2011</date><risdate>2011</risdate><volume>111</volume><issue>1</issue><spage>41</spage><epage>46</epage><pages>41-46</pages><issn>1389-1723</issn><eissn>1347-4421</eissn><abstract>The methanogenic pathway and microbial community in a thermophilic anaerobic digestion process of organic solid waste were investigated in a continuous-flow stirred-tank reactor using artificial garbage slurry as a feedstock. The decomposition pathway of acetate, a significant precursor of CH
4 and a key intermediate metabolite in the anaerobic digestion process, was analyzed by using stable isotopes. A tracer experiment using
13C-labeled acetate revealed that approximately 80% of the acetate was decomposed via a non-aceticlastic oxidative pathway, whereas the remainder was converted to methane via an aceticlastic pathway. Archaeal 16S rRNA analyses demonstrated that the hydrogenotrophic methanogens
Methanoculleus spp. accounted for >
90% of detected methanogens, and the aceticlastic methanogens
Methanosarcina spp. were the minor constituents. The clone library targeting bacterial 16S rRNA indicated the predominance of the novel Thermotogales bacterium (relative abundance: ~
53%), which is related to anaerobic acetate oxidizer
Thermotoga lettingae TMO, although the sequence similarity was low. Uncultured bacteria that phylogenetically belong to municipal solid waste cluster I were also predominant in the microflora (~
30%). These results imply that the microbial community in the thermophilic degrading process of organic solid waste consists exclusively of unidentified bacteria, which efficiently remove acetate through a non-aceticlastic oxidative pathway.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>20851673</pmid><doi>10.1016/j.jbiosc.2010.08.011</doi><tpages>6</tpages></addata></record> |
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subjects | Acetates - metabolism Anaerobiosis Bacteria - classification Bacteria - genetics Bacteria - metabolism Biological and medical sciences Bioreactors Bioreactors - microbiology Biotechnology Carbon Isotopes - metabolism Euryarchaeota - classification Euryarchaeota - genetics Euryarchaeota - metabolism Fundamental and applied biological sciences. Psychology Methane - metabolism Methanoculleus Methanogenic pathway Methanosarcina Methods. Procedures. Technologies Microbial community structure Organic solid waste Phylogeny RNA, Archaeal - genetics RNA, Bacterial - genetics RNA, Ribosomal, 16S - genetics Sewage - microbiology Thermophilic methanogenic bioreactor Thermotoga lettingae Thermotogales Various methods and equipments |
title | Methanogenic pathway and community structure in a thermophilic anaerobic digestion process of organic solid waste |
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