Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003–2009
Sapovirus, a member of the family Caliciviridae, is one of the major causative agents of viral gastroenteritis affecting all age groups. A total of 3232 faecal specimens collected from infants and children with gastroenteritis in five different regions of Japan during 2003–2009 were examined for sap...
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| Veröffentlicht in: | Epidemiology and infection 2012-01, Vol.140 (1), p.74-77 |
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| creator | DEY, S. K. PHATHAMMAVONG, O. NGUYEN, T. D. THONGPRACHUM, A. CHAN-IT, W. OKITSU, S. MIZUGUCHI, M. USHIJIMA, H. |
| description | Sapovirus, a member of the family Caliciviridae, is one of the major causative agents of viral gastroenteritis affecting all age groups. A total of 3232 faecal specimens collected from infants and children with gastroenteritis in five different regions of Japan during 2003–2009 were examined for sapovirus by reverse transcription–polymerase chain reaction. Sapoviruses were detected in 131 (4·05%) patients with the peak observed mainly in the cold season (November–March) in Japan during 2003–2009. During the last 6 years, sapovirus GI/1 was the predominant strain in Japan followed by GIV, GII/3, GII/6, GII/2, GII/12 and GI, respectively. |
| doi_str_mv | 10.1017/S0950268811000240 |
| format | Article |
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K. ; PHATHAMMAVONG, O. ; NGUYEN, T. D. ; THONGPRACHUM, A. ; CHAN-IT, W. ; OKITSU, S. ; MIZUGUCHI, M. ; USHIJIMA, H.</creator><creatorcontrib>DEY, S. K. ; PHATHAMMAVONG, O. ; NGUYEN, T. D. ; THONGPRACHUM, A. ; CHAN-IT, W. ; OKITSU, S. ; MIZUGUCHI, M. ; USHIJIMA, H.</creatorcontrib><description>Sapovirus, a member of the family Caliciviridae, is one of the major causative agents of viral gastroenteritis affecting all age groups. A total of 3232 faecal specimens collected from infants and children with gastroenteritis in five different regions of Japan during 2003–2009 were examined for sapovirus by reverse transcription–polymerase chain reaction. Sapoviruses were detected in 131 (4·05%) patients with the peak observed mainly in the cold season (November–March) in Japan during 2003–2009. During the last 6 years, sapovirus GI/1 was the predominant strain in Japan followed by GIV, GII/3, GII/6, GII/2, GII/12 and GI, respectively.</description><identifier>ISSN: 0950-2688</identifier><identifier>EISSN: 1469-4409</identifier><identifier>DOI: 10.1017/S0950268811000240</identifier><identifier>PMID: 21371364</identifier><identifier>CODEN: EPINEU</identifier><language>eng</language><publisher>Cambridge, UK: Cambridge University Press</publisher><subject>Adolescent ; Analysis of Variance ; Biological and medical sciences ; Caliciviridae Infections - epidemiology ; Caliciviridae Infections - virology ; Child ; Child, Preschool ; Disease ; Epidemics ; Feces - virology ; Fundamental and applied biological sciences. Psychology ; Gastroenteritis ; Gastroenteritis - epidemiology ; Gastroenteritis - virology ; Genotype ; Genotype & phenotype ; Humans ; Infant ; Infections ; Japan - epidemiology ; Mann-Whitney U test ; Microbiology ; Mortality ; Pediatrics ; Sapovirus - genetics ; Sapovirus - isolation & purification ; Seasonal variations ; Seasons ; Spatio-temporal patterns ; Statistics, Nonparametric</subject><ispartof>Epidemiology and infection, 2012-01, Vol.140 (1), p.74-77</ispartof><rights>Copyright © Cambridge University Press 2011</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c510t-1cfeeee1d928eb4f3bc6456fbe56ae1f4466f8e20e649f6706c98a5e698184293</citedby><cites>FETCH-LOGICAL-c510t-1cfeeee1d928eb4f3bc6456fbe56ae1f4466f8e20e649f6706c98a5e698184293</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=25962791$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21371364$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>DEY, S. K.</creatorcontrib><creatorcontrib>PHATHAMMAVONG, O.</creatorcontrib><creatorcontrib>NGUYEN, T. D.</creatorcontrib><creatorcontrib>THONGPRACHUM, A.</creatorcontrib><creatorcontrib>CHAN-IT, W.</creatorcontrib><creatorcontrib>OKITSU, S.</creatorcontrib><creatorcontrib>MIZUGUCHI, M.</creatorcontrib><creatorcontrib>USHIJIMA, H.</creatorcontrib><title>Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003–2009</title><title>Epidemiology and infection</title><addtitle>Epidemiol Infect</addtitle><description>Sapovirus, a member of the family Caliciviridae, is one of the major causative agents of viral gastroenteritis affecting all age groups. A total of 3232 faecal specimens collected from infants and children with gastroenteritis in five different regions of Japan during 2003–2009 were examined for sapovirus by reverse transcription–polymerase chain reaction. Sapoviruses were detected in 131 (4·05%) patients with the peak observed mainly in the cold season (November–March) in Japan during 2003–2009. During the last 6 years, sapovirus GI/1 was the predominant strain in Japan followed by GIV, GII/3, GII/6, GII/2, GII/12 and GI, respectively.</description><subject>Adolescent</subject><subject>Analysis of Variance</subject><subject>Biological and medical sciences</subject><subject>Caliciviridae Infections - epidemiology</subject><subject>Caliciviridae Infections - virology</subject><subject>Child</subject><subject>Child, Preschool</subject><subject>Disease</subject><subject>Epidemics</subject><subject>Feces - virology</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Gastroenteritis</subject><subject>Gastroenteritis - epidemiology</subject><subject>Gastroenteritis - virology</subject><subject>Genotype</subject><subject>Genotype & phenotype</subject><subject>Humans</subject><subject>Infant</subject><subject>Infections</subject><subject>Japan - epidemiology</subject><subject>Mann-Whitney U test</subject><subject>Microbiology</subject><subject>Mortality</subject><subject>Pediatrics</subject><subject>Sapovirus - genetics</subject><subject>Sapovirus - isolation & purification</subject><subject>Seasonal variations</subject><subject>Seasons</subject><subject>Spatio-temporal patterns</subject><subject>Statistics, Nonparametric</subject><issn>0950-2688</issn><issn>1469-4409</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp1kNFqFTEQhoNY7PHoA3gjQRBvunWSzWaTSylqLQUvqvRyyWYnJWVPsia7Qu_6Dn1Dn6Q57WkLinMzMPPN_DM_IW8YHDJg7ccz0A1wqRRjAMAFPCMrJqSuhAD9nKy27Wrb3ycvc74sjOaqfUH2OatbVkuxIudnaHIMZqSTmWdMgZow0AsMcb6akA4-z8n3y-xjoNHRbKb426clUx8c2ruyD_TETCYcUA5Q_7m-KUm_InvOjBlf7_Ka_Pzy-cfRcXX6_eu3o0-nlW0YzBWzDkuwoRyGvXB1b6VopOuxkQaZE0JKp5ADSqGdbEFarUyDUiumBNf1mny43zul-GvBPHcbny2OowkYl9xpaKHmoGQh3_1FXsYllc-3kBSt4oVcE3YP2RRzTui6KfmNSVcdg27refeP52Xm7W7x0m9weJx4MLkA73eAydaMLplgfX7iGi15q1nh6p242fTJDxf4dOL_5W8BWUuXQw</recordid><startdate>20120101</startdate><enddate>20120101</enddate><creator>DEY, S. 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K. ; PHATHAMMAVONG, O. ; NGUYEN, T. D. ; THONGPRACHUM, A. ; CHAN-IT, W. ; OKITSU, S. ; MIZUGUCHI, M. ; USHIJIMA, H.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c510t-1cfeeee1d928eb4f3bc6456fbe56ae1f4466f8e20e649f6706c98a5e698184293</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Adolescent</topic><topic>Analysis of Variance</topic><topic>Biological and medical sciences</topic><topic>Caliciviridae Infections - epidemiology</topic><topic>Caliciviridae Infections - virology</topic><topic>Child</topic><topic>Child, Preschool</topic><topic>Disease</topic><topic>Epidemics</topic><topic>Feces - virology</topic><topic>Fundamental and applied biological sciences. 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K.</au><au>PHATHAMMAVONG, O.</au><au>NGUYEN, T. D.</au><au>THONGPRACHUM, A.</au><au>CHAN-IT, W.</au><au>OKITSU, S.</au><au>MIZUGUCHI, M.</au><au>USHIJIMA, H.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003–2009</atitle><jtitle>Epidemiology and infection</jtitle><addtitle>Epidemiol Infect</addtitle><date>2012-01-01</date><risdate>2012</risdate><volume>140</volume><issue>1</issue><spage>74</spage><epage>77</epage><pages>74-77</pages><issn>0950-2688</issn><eissn>1469-4409</eissn><coden>EPINEU</coden><abstract>Sapovirus, a member of the family Caliciviridae, is one of the major causative agents of viral gastroenteritis affecting all age groups. A total of 3232 faecal specimens collected from infants and children with gastroenteritis in five different regions of Japan during 2003–2009 were examined for sapovirus by reverse transcription–polymerase chain reaction. Sapoviruses were detected in 131 (4·05%) patients with the peak observed mainly in the cold season (November–March) in Japan during 2003–2009. During the last 6 years, sapovirus GI/1 was the predominant strain in Japan followed by GIV, GII/3, GII/6, GII/2, GII/12 and GI, respectively.</abstract><cop>Cambridge, UK</cop><pub>Cambridge University Press</pub><pmid>21371364</pmid><doi>10.1017/S0950268811000240</doi><tpages>4</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Epidemiology and infection, 2012-01, Vol.140 (1), p.74-77 |
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| source | Jstor Complete Legacy; MEDLINE; PubMed Central |
| subjects | Adolescent Analysis of Variance Biological and medical sciences Caliciviridae Infections - epidemiology Caliciviridae Infections - virology Child Child, Preschool Disease Epidemics Feces - virology Fundamental and applied biological sciences. Psychology Gastroenteritis Gastroenteritis - epidemiology Gastroenteritis - virology Genotype Genotype & phenotype Humans Infant Infections Japan - epidemiology Mann-Whitney U test Microbiology Mortality Pediatrics Sapovirus - genetics Sapovirus - isolation & purification Seasonal variations Seasons Spatio-temporal patterns Statistics, Nonparametric |
| title | Seasonal pattern and genotype distribution of sapovirus infection in Japan, 2003–2009 |
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