Novel mutations of endothelin-B receptor gene in Pakistani patients with Waardenburg syndrome
Mutations in EDNRB gene have been reported to cause Waardenburg-Shah syndrome (WS4) in humans. We investigated 17 patients with WS4 for identification of mutations in EDNRB gene using PCR and direct sequencing technique. Four genomic mutations were detected in four patients; a G to C transversion in...
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Veröffentlicht in: | Molecular biology reports 2012, Vol.39 (1), p.785-788 |
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description | Mutations in EDNRB gene have been reported to cause Waardenburg-Shah syndrome (WS4) in humans. We investigated 17 patients with WS4 for identification of mutations in EDNRB gene using PCR and direct sequencing technique. Four genomic mutations were detected in four patients; a G to C transversion in codon 335 (S335C) in exon 5 and a transition of T to C in codon (S361L) in exon 5, a transition of A to G in codon 277 (L277L) in exon 4, a non coding transversion of T to A at −30 nucleotide position of exon 5. None of these mutations were found in controls. One of the patients harbored two novel mutations (S335C, S361L) in exon 5 and one in Intronic region (−30exon5 A>G). All of the mutations were homozygous and novel except the mutation observed in exon 4. In this study, we have identified 3 novel mutations in EDNRB gene associated with WS4 in Pakistani patients. |
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We investigated 17 patients with WS4 for identification of mutations in EDNRB gene using PCR and direct sequencing technique. Four genomic mutations were detected in four patients; a G to C transversion in codon 335 (S335C) in exon 5 and a transition of T to C in codon (S361L) in exon 5, a transition of A to G in codon 277 (L277L) in exon 4, a non coding transversion of T to A at −30 nucleotide position of exon 5. None of these mutations were found in controls. One of the patients harbored two novel mutations (S335C, S361L) in exon 5 and one in Intronic region (−30exon5 A>G). All of the mutations were homozygous and novel except the mutation observed in exon 4. In this study, we have identified 3 novel mutations in EDNRB gene associated with WS4 in Pakistani patients.</description><identifier>ISSN: 0301-4851</identifier><identifier>EISSN: 1573-4978</identifier><identifier>DOI: 10.1007/s11033-011-0799-x</identifier><identifier>PMID: 21547364</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Animal Anatomy ; Animal Biochemistry ; Base Sequence ; Biomedical and Life Sciences ; Codons ; DNA Primers - genetics ; EDNRB gene ; Exons ; Genetic disorders ; genomics ; Hirschsprung Disease ; Histology ; Humans ; Life Sciences ; Molecular biology ; Molecular Sequence Data ; Morphology ; Mutation ; Nucleotides ; Pakistan ; Point Mutation - genetics ; Polymerase Chain Reaction ; Population genetics ; Protein Conformation ; Receptor, Endothelin B - genetics ; Sequence Analysis, DNA ; Transversion ; Waardenburg Syndrome - genetics</subject><ispartof>Molecular biology reports, 2012, Vol.39 (1), p.785-788</ispartof><rights>Springer Science+Business Media B.V. 2011</rights><rights>Springer Science+Business Media B.V. 2012</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c403t-81e706b315cb22ea3ca969779c2e23bb704ffa83691523b241fd695c596f65573</citedby><cites>FETCH-LOGICAL-c403t-81e706b315cb22ea3ca969779c2e23bb704ffa83691523b241fd695c596f65573</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11033-011-0799-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11033-011-0799-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21547364$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jabeen, Raheela</creatorcontrib><creatorcontrib>Babar, Masroor Ellahi</creatorcontrib><creatorcontrib>Ahmad, Jamil</creatorcontrib><creatorcontrib>Awan, Ali Raza</creatorcontrib><title>Novel mutations of endothelin-B receptor gene in Pakistani patients with Waardenburg syndrome</title><title>Molecular biology reports</title><addtitle>Mol Biol Rep</addtitle><addtitle>Mol Biol Rep</addtitle><description>Mutations in EDNRB gene have been reported to cause Waardenburg-Shah syndrome (WS4) in humans. We investigated 17 patients with WS4 for identification of mutations in EDNRB gene using PCR and direct sequencing technique. Four genomic mutations were detected in four patients; a G to C transversion in codon 335 (S335C) in exon 5 and a transition of T to C in codon (S361L) in exon 5, a transition of A to G in codon 277 (L277L) in exon 4, a non coding transversion of T to A at −30 nucleotide position of exon 5. None of these mutations were found in controls. One of the patients harbored two novel mutations (S335C, S361L) in exon 5 and one in Intronic region (−30exon5 A>G). All of the mutations were homozygous and novel except the mutation observed in exon 4. In this study, we have identified 3 novel mutations in EDNRB gene associated with WS4 in Pakistani patients.</description><subject>Animal Anatomy</subject><subject>Animal Biochemistry</subject><subject>Base Sequence</subject><subject>Biomedical and Life Sciences</subject><subject>Codons</subject><subject>DNA Primers - genetics</subject><subject>EDNRB gene</subject><subject>Exons</subject><subject>Genetic disorders</subject><subject>genomics</subject><subject>Hirschsprung Disease</subject><subject>Histology</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Molecular biology</subject><subject>Molecular Sequence Data</subject><subject>Morphology</subject><subject>Mutation</subject><subject>Nucleotides</subject><subject>Pakistan</subject><subject>Point Mutation - genetics</subject><subject>Polymerase Chain Reaction</subject><subject>Population genetics</subject><subject>Protein Conformation</subject><subject>Receptor, Endothelin B - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Transversion</subject><subject>Waardenburg Syndrome - genetics</subject><issn>0301-4851</issn><issn>1573-4978</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2012</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU1v1DAQhi0EotvCD-ilsri0F4PHH3F8pFULlSrgAOKEIieZbFMSe2s7pf33eLUFJCQ4WSM_7zMavYQcAn8NnJs3CYBLyTgA48Zadv-ErEAbyZQ19VOy4pIDU7WGPbKf0g3nXIHRz8meAK2MrNSKfPsQ7nCi85JdHoNPNAwUfR_yNU6jZ6c0YoebHCJdo0c6evrJfR9Tdn6kmxJBnxP9MeZr-tW52KNvl7im6cH3Mcz4gjwb3JTw5eN7QL5cnH8-e8-uPr67PHt7xTrFZWY1oOFVK0F3rRDoZOdsZY2xnUAh29ZwNQyulpUFXWahYOgrqzttq6HS5eADcrzzbmK4XTDlZh5Th9PkPIYlNZbr2kgNqpAn_yWBi5pDraQu6Ku_0JuwRF_u2PqEMNJWBYId1MWQUsSh2cRxdvGhmJptSc2upKaU1GxLau5L5uhRvLQz9r8Tv1opgNgBqXz5NcY_m_9t_QkwAJw4</recordid><startdate>2012</startdate><enddate>2012</enddate><creator>Jabeen, Raheela</creator><creator>Babar, Masroor Ellahi</creator><creator>Ahmad, Jamil</creator><creator>Awan, Ali Raza</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>2012</creationdate><title>Novel mutations of endothelin-B receptor gene in Pakistani patients with Waardenburg syndrome</title><author>Jabeen, Raheela ; Babar, Masroor Ellahi ; Ahmad, Jamil ; Awan, Ali Raza</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c403t-81e706b315cb22ea3ca969779c2e23bb704ffa83691523b241fd695c596f65573</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2012</creationdate><topic>Animal Anatomy</topic><topic>Animal Biochemistry</topic><topic>Base Sequence</topic><topic>Biomedical and Life Sciences</topic><topic>Codons</topic><topic>DNA Primers - genetics</topic><topic>EDNRB gene</topic><topic>Exons</topic><topic>Genetic disorders</topic><topic>genomics</topic><topic>Hirschsprung Disease</topic><topic>Histology</topic><topic>Humans</topic><topic>Life Sciences</topic><topic>Molecular biology</topic><topic>Molecular Sequence Data</topic><topic>Morphology</topic><topic>Mutation</topic><topic>Nucleotides</topic><topic>Pakistan</topic><topic>Point Mutation - genetics</topic><topic>Polymerase Chain Reaction</topic><topic>Population genetics</topic><topic>Protein Conformation</topic><topic>Receptor, Endothelin B - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Transversion</topic><topic>Waardenburg Syndrome - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jabeen, Raheela</creatorcontrib><creatorcontrib>Babar, Masroor Ellahi</creatorcontrib><creatorcontrib>Ahmad, Jamil</creatorcontrib><creatorcontrib>Awan, Ali Raza</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Molecular biology reports</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jabeen, Raheela</au><au>Babar, Masroor Ellahi</au><au>Ahmad, Jamil</au><au>Awan, Ali Raza</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Novel mutations of endothelin-B receptor gene in Pakistani patients with Waardenburg syndrome</atitle><jtitle>Molecular biology reports</jtitle><stitle>Mol Biol Rep</stitle><addtitle>Mol Biol Rep</addtitle><date>2012</date><risdate>2012</risdate><volume>39</volume><issue>1</issue><spage>785</spage><epage>788</epage><pages>785-788</pages><issn>0301-4851</issn><eissn>1573-4978</eissn><abstract>Mutations in EDNRB gene have been reported to cause Waardenburg-Shah syndrome (WS4) in humans. We investigated 17 patients with WS4 for identification of mutations in EDNRB gene using PCR and direct sequencing technique. Four genomic mutations were detected in four patients; a G to C transversion in codon 335 (S335C) in exon 5 and a transition of T to C in codon (S361L) in exon 5, a transition of A to G in codon 277 (L277L) in exon 4, a non coding transversion of T to A at −30 nucleotide position of exon 5. None of these mutations were found in controls. One of the patients harbored two novel mutations (S335C, S361L) in exon 5 and one in Intronic region (−30exon5 A>G). All of the mutations were homozygous and novel except the mutation observed in exon 4. In this study, we have identified 3 novel mutations in EDNRB gene associated with WS4 in Pakistani patients.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>21547364</pmid><doi>10.1007/s11033-011-0799-x</doi><tpages>4</tpages></addata></record> |
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subjects | Animal Anatomy Animal Biochemistry Base Sequence Biomedical and Life Sciences Codons DNA Primers - genetics EDNRB gene Exons Genetic disorders genomics Hirschsprung Disease Histology Humans Life Sciences Molecular biology Molecular Sequence Data Morphology Mutation Nucleotides Pakistan Point Mutation - genetics Polymerase Chain Reaction Population genetics Protein Conformation Receptor, Endothelin B - genetics Sequence Analysis, DNA Transversion Waardenburg Syndrome - genetics |
title | Novel mutations of endothelin-B receptor gene in Pakistani patients with Waardenburg syndrome |
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