Linkage and association analyses of glaucoma related traits in a large pedigree from a Dutch genetically isolated population

BackgroundDespite extensive research on the genetic determinants of glaucoma, the genes identified to date explain only a small proportion of cases in the general population.MethodsGenome-wide linkage and association analyses of quantitative traits related to glaucoma were performed: intraocular pre...

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Veröffentlicht in:Journal of medical genetics 2011-12, Vol.48 (12), p.802-809
Hauptverfasser: Axenovich, Tatiana, Zorkoltseva, Irina, Belonogova, Nadezhda, van Koolwijk, Leonike, Borodin, Pavel, Kirichenko, Anatoly, Babenko, Vladimir, Ramdas, Wishal, Amin, Najaf, Despriet, Dominiec, Vingerling, Johannes, Lemij, Hans, Oostra, B A, Klaver, Caroline, Aulchenko, Yurii, van Duijn, Cornelia
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Sprache:eng
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Zusammenfassung:BackgroundDespite extensive research on the genetic determinants of glaucoma, the genes identified to date explain only a small proportion of cases in the general population.MethodsGenome-wide linkage and association analyses of quantitative traits related to glaucoma were performed: intraocular pressure, size and morphology of the optic disc (individual and combined by method of principal components) and thickness of the retinal nerve fibre layer (RNFL), in a large pedigree from a genetically isolated Dutch population.ResultsFor the size of the optic disc, the study demonstrated a significant linkage signal (logarithm of odds (LOD)=3.6) at the LRP1B region on chromosome 2q21.2-q22.2 and significant association (p=8.95×10−12) with the previously reported CDC7/TGFBR3 locus at 1p22. For parameters describing morphology of the optic disc, the study obtained significant linkage signal (LOD=4.6) at regions SIRPA and RNF24/PANK2 at 20p13 (false discovery rate (FDR) based q value
ISSN:0022-2593
1468-6244
DOI:10.1136/jmedgenet-2011-100436