Characterizing the Microbial Colonization of a Dolostone Quarry: Implications for Stone Biodeterioration and Response to Biocide Treatments
This study examines the microbial colonization of three fronts of an abandoned dolostone quarry (Redueña, Madrid, Spain) exposed to atmospheric conditions for different time periods since Roman times to the present. Through scanning electron microscopy in backscattered electron mode (SEM-BSE), endol...
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description | This study examines the microbial colonization of three fronts of an abandoned dolostone quarry (Redueña, Madrid, Spain) exposed to atmospheric conditions for different time periods since Roman times to the present. Through scanning electron microscopy in backscattered electron mode (SEM-BSE), endolithic colonization was predominantly detected in the most recently exposed front, while in the longer exposed quarry fronts, epilithic forms of growth were most often observed. These observations were confirmed by denaturing gradient gel electrophoresis (DGGE) analysis. Based on the distribution pattern of microbial colonization in the different quarry fronts, we then established a sequence of colonization events that took place over this long time frame. Bioalteration processes related to this sequential colonization were also identified. Characterizing these sequential processes can be useful for interpreting biodeterioration processes in historic dolostone monuments, especially those affecting constructions in the area of the Redueña stone quarry. In a second experimental stage, different biocide treatments were tested on this quarry rock to find the best way to avoid the microbial colonization effects identified. Through combined SEMBSE/DGGE analysis, the efficacy of several biocides against the microorganisms inhabiting the dolostones was assessed after 4 and 16 months treatment. In general, all treatments were effective at reducing around 80% of the lichen cover, although effects on endolithic lithobiontic communities were dependant on how well the rock surface had been mechanically cleaned prior to treatment and gradually disappeared over time. |
doi_str_mv | 10.1007/s00248-011-9815-x |
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Through scanning electron microscopy in backscattered electron mode (SEM-BSE), endolithic colonization was predominantly detected in the most recently exposed front, while in the longer exposed quarry fronts, epilithic forms of growth were most often observed. These observations were confirmed by denaturing gradient gel electrophoresis (DGGE) analysis. Based on the distribution pattern of microbial colonization in the different quarry fronts, we then established a sequence of colonization events that took place over this long time frame. Bioalteration processes related to this sequential colonization were also identified. Characterizing these sequential processes can be useful for interpreting biodeterioration processes in historic dolostone monuments, especially those affecting constructions in the area of the Redueña stone quarry. In a second experimental stage, different biocide treatments were tested on this quarry rock to find the best way to avoid the microbial colonization effects identified. Through combined SEMBSE/DGGE analysis, the efficacy of several biocides against the microorganisms inhabiting the dolostones was assessed after 4 and 16 months treatment. In general, all treatments were effective at reducing around 80% of the lichen cover, although effects on endolithic lithobiontic communities were dependant on how well the rock surface had been mechanically cleaned prior to treatment and gradually disappeared over time.</description><identifier>ISSN: 0095-3628</identifier><identifier>EISSN: 1432-184X</identifier><identifier>DOI: 10.1007/s00248-011-9815-x</identifier><identifier>PMID: 21359558</identifier><identifier>CODEN: MCBEBU</identifier><language>eng</language><publisher>New York: Springer Science + Business Media</publisher><subject>Biocides ; Biological and medical sciences ; Biomedical and Life Sciences ; Biota ; Biotransformation ; Calcium Carbonate - chemistry ; Colonization ; Colorimetry ; Construction Materials - microbiology ; Crystals ; Denaturing Gradient Gel Electrophoresis ; Disinfectants - pharmacology ; DNA, Fungal - genetics ; DNA, Ribosomal Spacer - genetics ; Ecology ; ENVIRONMENTAL MICROBIOLOGY ; Fundamental and applied biological sciences. Psychology ; Fungi ; Genes, rRNA ; Geoecology/Natural Processes ; Hyphae ; Lichens ; Lichens - drug effects ; Lichens - growth & development ; Lichens - isolation & purification ; Life Sciences ; Magnesium - chemistry ; Microbial colonization ; Microbial Ecology ; Microbiology ; Microorganisms ; Microscopy, Electron, Scanning ; Nature Conservation ; Porosity ; Quarries ; Rocks ; Spain ; Stone ; Water Quality/Water Pollution</subject><ispartof>Microbial ecology, 2011-08, Vol.62 (2), p.299-313</ispartof><rights>2011 Springer Science+Business Media, LLC.</rights><rights>Springer Science+Business Media, LLC 2011</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c497t-91d8dd0dd494aa4dc7f212304bfed9050a50e302d08a4b65355530732292b55f3</citedby><cites>FETCH-LOGICAL-c497t-91d8dd0dd494aa4dc7f212304bfed9050a50e302d08a4b65355530732292b55f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/41489151$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/41489151$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,27924,27925,41488,42557,51319,58017,58250</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24585763$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21359558$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Cámara, Beatriz</creatorcontrib><creatorcontrib>De los Ríos, Asuncion</creatorcontrib><creatorcontrib>Urizal, Marta</creatorcontrib><creatorcontrib>de Buergo, Mónica Álvarez</creatorcontrib><creatorcontrib>Varas, Maria Jose</creatorcontrib><creatorcontrib>Fort, Rafael</creatorcontrib><creatorcontrib>Ascaso, Carmen</creatorcontrib><title>Characterizing the Microbial Colonization of a Dolostone Quarry: Implications for Stone Biodeterioration and Response to Biocide Treatments</title><title>Microbial ecology</title><addtitle>Microb Ecol</addtitle><addtitle>Microb Ecol</addtitle><description>This study examines the microbial colonization of three fronts of an abandoned dolostone quarry (Redueña, Madrid, Spain) exposed to atmospheric conditions for different time periods since Roman times to the present. Through scanning electron microscopy in backscattered electron mode (SEM-BSE), endolithic colonization was predominantly detected in the most recently exposed front, while in the longer exposed quarry fronts, epilithic forms of growth were most often observed. These observations were confirmed by denaturing gradient gel electrophoresis (DGGE) analysis. Based on the distribution pattern of microbial colonization in the different quarry fronts, we then established a sequence of colonization events that took place over this long time frame. Bioalteration processes related to this sequential colonization were also identified. Characterizing these sequential processes can be useful for interpreting biodeterioration processes in historic dolostone monuments, especially those affecting constructions in the area of the Redueña stone quarry. In a second experimental stage, different biocide treatments were tested on this quarry rock to find the best way to avoid the microbial colonization effects identified. Through combined SEMBSE/DGGE analysis, the efficacy of several biocides against the microorganisms inhabiting the dolostones was assessed after 4 and 16 months treatment. In general, all treatments were effective at reducing around 80% of the lichen cover, although effects on endolithic lithobiontic communities were dependant on how well the rock surface had been mechanically cleaned prior to treatment and gradually disappeared over time.</description><subject>Biocides</subject><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Biota</subject><subject>Biotransformation</subject><subject>Calcium Carbonate - chemistry</subject><subject>Colonization</subject><subject>Colorimetry</subject><subject>Construction Materials - microbiology</subject><subject>Crystals</subject><subject>Denaturing Gradient Gel Electrophoresis</subject><subject>Disinfectants - pharmacology</subject><subject>DNA, Fungal - genetics</subject><subject>DNA, Ribosomal Spacer - genetics</subject><subject>Ecology</subject><subject>ENVIRONMENTAL MICROBIOLOGY</subject><subject>Fundamental and applied biological sciences. 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Psychology</topic><topic>Fungi</topic><topic>Genes, rRNA</topic><topic>Geoecology/Natural Processes</topic><topic>Hyphae</topic><topic>Lichens</topic><topic>Lichens - drug effects</topic><topic>Lichens - growth & development</topic><topic>Lichens - isolation & purification</topic><topic>Life Sciences</topic><topic>Magnesium - chemistry</topic><topic>Microbial colonization</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Microscopy, Electron, Scanning</topic><topic>Nature Conservation</topic><topic>Porosity</topic><topic>Quarries</topic><topic>Rocks</topic><topic>Spain</topic><topic>Stone</topic><topic>Water Quality/Water Pollution</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cámara, Beatriz</creatorcontrib><creatorcontrib>De los Ríos, Asuncion</creatorcontrib><creatorcontrib>Urizal, Marta</creatorcontrib><creatorcontrib>de Buergo, Mónica Álvarez</creatorcontrib><creatorcontrib>Varas, 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Ecol</addtitle><date>2011-08-01</date><risdate>2011</risdate><volume>62</volume><issue>2</issue><spage>299</spage><epage>313</epage><pages>299-313</pages><issn>0095-3628</issn><eissn>1432-184X</eissn><coden>MCBEBU</coden><abstract>This study examines the microbial colonization of three fronts of an abandoned dolostone quarry (Redueña, Madrid, Spain) exposed to atmospheric conditions for different time periods since Roman times to the present. Through scanning electron microscopy in backscattered electron mode (SEM-BSE), endolithic colonization was predominantly detected in the most recently exposed front, while in the longer exposed quarry fronts, epilithic forms of growth were most often observed. These observations were confirmed by denaturing gradient gel electrophoresis (DGGE) analysis. Based on the distribution pattern of microbial colonization in the different quarry fronts, we then established a sequence of colonization events that took place over this long time frame. Bioalteration processes related to this sequential colonization were also identified. Characterizing these sequential processes can be useful for interpreting biodeterioration processes in historic dolostone monuments, especially those affecting constructions in the area of the Redueña stone quarry. In a second experimental stage, different biocide treatments were tested on this quarry rock to find the best way to avoid the microbial colonization effects identified. Through combined SEMBSE/DGGE analysis, the efficacy of several biocides against the microorganisms inhabiting the dolostones was assessed after 4 and 16 months treatment. In general, all treatments were effective at reducing around 80% of the lichen cover, although effects on endolithic lithobiontic communities were dependant on how well the rock surface had been mechanically cleaned prior to treatment and gradually disappeared over time.</abstract><cop>New York</cop><pub>Springer Science + Business Media</pub><pmid>21359558</pmid><doi>10.1007/s00248-011-9815-x</doi><tpages>15</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biocides Biological and medical sciences Biomedical and Life Sciences Biota Biotransformation Calcium Carbonate - chemistry Colonization Colorimetry Construction Materials - microbiology Crystals Denaturing Gradient Gel Electrophoresis Disinfectants - pharmacology DNA, Fungal - genetics DNA, Ribosomal Spacer - genetics Ecology ENVIRONMENTAL MICROBIOLOGY Fundamental and applied biological sciences. Psychology Fungi Genes, rRNA Geoecology/Natural Processes Hyphae Lichens Lichens - drug effects Lichens - growth & development Lichens - isolation & purification Life Sciences Magnesium - chemistry Microbial colonization Microbial Ecology Microbiology Microorganisms Microscopy, Electron, Scanning Nature Conservation Porosity Quarries Rocks Spain Stone Water Quality/Water Pollution |
title | Characterizing the Microbial Colonization of a Dolostone Quarry: Implications for Stone Biodeterioration and Response to Biocide Treatments |
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