Performance of a non-grafted monolithic support for purification of supercoiled plasmid DNA
The use of therapeutics based on plasmid DNA (pDNA) relies on procedures that efficiently produce and purify the supercoiled (sc) plasmid isoform. Several chromatographic methods have been applied for the sc plasmid purification, but with most of them it is not possible to obtain the required purity...
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description | The use of therapeutics based on plasmid DNA (pDNA) relies on procedures that efficiently produce and purify the supercoiled (sc) plasmid isoform. Several chromatographic methods have been applied for the sc plasmid purification, but with most of them it is not possible to obtain the required purity degree and the majority of the supports used present low capacity to bind the plasmid molecules. However, the chromatographic monolithic supports are an interesting alternative to conventional supports due to their excellent mass transfer properties and their high binding capacity for pDNA. The separation of pDNA isoforms, using short non-grafted monolithic column with CarbonylDiImidazole (CDI) functional groups, is described in the current work. The effect of different flow rates on plasmid isoforms separation was also verified. Several breakthrough experiments were designed to study the effect of different parameters such as pDNA topology and concentration as well as flow rate on the monolithic support binding capacity. One of the most striking results is related to the specific recognition of the sc isoform by this CDI monolith, without flow rate dependence. Additionally, the binding capacity has been found to be significantly higher for sc plasmid, probably because of its compact structure, being also improved when using feedstock with increased plasmid concentrations and decreased linear velocity. In fact, this new monolithic support arises as a powerful instrument on the sc pDNA purification for further clinical applications. |
doi_str_mv | 10.1016/j.chroma.2010.12.018 |
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Several chromatographic methods have been applied for the sc plasmid purification, but with most of them it is not possible to obtain the required purity degree and the majority of the supports used present low capacity to bind the plasmid molecules. However, the chromatographic monolithic supports are an interesting alternative to conventional supports due to their excellent mass transfer properties and their high binding capacity for pDNA. The separation of pDNA isoforms, using short non-grafted monolithic column with CarbonylDiImidazole (CDI) functional groups, is described in the current work. The effect of different flow rates on plasmid isoforms separation was also verified. Several breakthrough experiments were designed to study the effect of different parameters such as pDNA topology and concentration as well as flow rate on the monolithic support binding capacity. One of the most striking results is related to the specific recognition of the sc isoform by this CDI monolith, without flow rate dependence. Additionally, the binding capacity has been found to be significantly higher for sc plasmid, probably because of its compact structure, being also improved when using feedstock with increased plasmid concentrations and decreased linear velocity. In fact, this new monolithic support arises as a powerful instrument on the sc pDNA purification for further clinical applications.</description><identifier>ISSN: 0021-9673</identifier><identifier>EISSN: 1873-3778</identifier><identifier>DOI: 10.1016/j.chroma.2010.12.018</identifier><identifier>PMID: 21251661</identifier><identifier>CODEN: JOCRAM</identifier><language>eng</language><publisher>Amsterdam: Elsevier B.V</publisher><subject>Affinity chromatography ; Ammonium Sulfate ; Analytical, structural and metabolic biochemistry ; Binding capacity ; Biological and medical sciences ; Biotechnology ; Breakthrough curves ; CDI monolithic column ; Chemical Phenomena ; Chromatography, Affinity - methods ; Dna, deoxyribonucleoproteins ; DNA, Superhelical - chemistry ; DNA, Superhelical - isolation & purification ; Fundamental and applied biological sciences. Psychology ; Hydrogen-Ion Concentration ; Methods. Procedures. Technologies ; Models, Chemical ; Nucleic acids ; Others ; Plasmids - chemistry ; Plasmids - isolation & purification ; Supercoiled plasmid DNA ; Various methods and equipments</subject><ispartof>Journal of Chromatography A, 2011-04, Vol.1218 (13), p.1701-1706</ispartof><rights>2010 Elsevier B.V.</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2010 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-16a627aed6f7dda93bc5c4c3db5a808114ddb10c0b80bebe976d31ecb2de8f63</citedby><cites>FETCH-LOGICAL-c423t-16a627aed6f7dda93bc5c4c3db5a808114ddb10c0b80bebe976d31ecb2de8f63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.chroma.2010.12.018$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,45974</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=23953127$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21251661$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sousa, A.</creatorcontrib><creatorcontrib>Bicho, D.</creatorcontrib><creatorcontrib>Tomaz, C.T.</creatorcontrib><creatorcontrib>Sousa, F.</creatorcontrib><creatorcontrib>Queiroz, J.A.</creatorcontrib><title>Performance of a non-grafted monolithic support for purification of supercoiled plasmid DNA</title><title>Journal of Chromatography A</title><addtitle>J Chromatogr A</addtitle><description>The use of therapeutics based on plasmid DNA (pDNA) relies on procedures that efficiently produce and purify the supercoiled (sc) plasmid isoform. Several chromatographic methods have been applied for the sc plasmid purification, but with most of them it is not possible to obtain the required purity degree and the majority of the supports used present low capacity to bind the plasmid molecules. However, the chromatographic monolithic supports are an interesting alternative to conventional supports due to their excellent mass transfer properties and their high binding capacity for pDNA. The separation of pDNA isoforms, using short non-grafted monolithic column with CarbonylDiImidazole (CDI) functional groups, is described in the current work. The effect of different flow rates on plasmid isoforms separation was also verified. Several breakthrough experiments were designed to study the effect of different parameters such as pDNA topology and concentration as well as flow rate on the monolithic support binding capacity. One of the most striking results is related to the specific recognition of the sc isoform by this CDI monolith, without flow rate dependence. Additionally, the binding capacity has been found to be significantly higher for sc plasmid, probably because of its compact structure, being also improved when using feedstock with increased plasmid concentrations and decreased linear velocity. In fact, this new monolithic support arises as a powerful instrument on the sc pDNA purification for further clinical applications.</description><subject>Affinity chromatography</subject><subject>Ammonium Sulfate</subject><subject>Analytical, structural and metabolic biochemistry</subject><subject>Binding capacity</subject><subject>Biological and medical sciences</subject><subject>Biotechnology</subject><subject>Breakthrough curves</subject><subject>CDI monolithic column</subject><subject>Chemical Phenomena</subject><subject>Chromatography, Affinity - methods</subject><subject>Dna, deoxyribonucleoproteins</subject><subject>DNA, Superhelical - chemistry</subject><subject>DNA, Superhelical - isolation & purification</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrogen-Ion Concentration</subject><subject>Methods. Procedures. Technologies</subject><subject>Models, Chemical</subject><subject>Nucleic acids</subject><subject>Others</subject><subject>Plasmids - chemistry</subject><subject>Plasmids - isolation & purification</subject><subject>Supercoiled plasmid DNA</subject><subject>Various methods and equipments</subject><issn>0021-9673</issn><issn>1873-3778</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kMFu1DAQhi0EotvCG6AqF8Qp2xl7104ulaoCLVIFHHrjYDn2mHqVxKmdVOLt8WqX9sZppJnvnxl9jH1AWCOgvNit7UOKg1lz2Lf4GrB5xVbYKFELpZrXbAXAsW6lEifsNOcdACpQ_C074ci3KCWu2K-flHxMgxktVdFXphrjWP9Oxs_kqiGOsQ_zQ7BVXqYpprkqcDUtKfhgzRziuA-VGSUbQ18iU2_yEFz1-fvVO_bGmz7T-2M9Y_dfv9xf39Z3P26-XV_d1XbDxVyjNJIrQ0565ZxpRWe3dmOF67amgQZx41yHYKFroKOOWiWdQLIdd9R4Kc7Yp8PaKcXHhfKsh5At9b0ZKS5Zt8CFBAlQyM2BtCnmnMjrKYXBpD8aQe-l6p0-SNV7qRq5LlJL7Px4YOkGcs-hfxYL8PEImGxN71OxGfILJ9qtQK4Kd3ngqNh4CpR0toGKeRcS2Vm7GP7_yV8v3ZjK</recordid><startdate>20110401</startdate><enddate>20110401</enddate><creator>Sousa, A.</creator><creator>Bicho, D.</creator><creator>Tomaz, C.T.</creator><creator>Sousa, F.</creator><creator>Queiroz, J.A.</creator><general>Elsevier B.V</general><general>Elsevier</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QH</scope><scope>7TM</scope><scope>7UA</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H97</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20110401</creationdate><title>Performance of a non-grafted monolithic support for purification of supercoiled plasmid DNA</title><author>Sousa, A. ; Bicho, D. ; Tomaz, C.T. ; Sousa, F. ; Queiroz, J.A.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-16a627aed6f7dda93bc5c4c3db5a808114ddb10c0b80bebe976d31ecb2de8f63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Affinity chromatography</topic><topic>Ammonium Sulfate</topic><topic>Analytical, structural and metabolic biochemistry</topic><topic>Binding capacity</topic><topic>Biological and medical sciences</topic><topic>Biotechnology</topic><topic>Breakthrough curves</topic><topic>CDI monolithic column</topic><topic>Chemical Phenomena</topic><topic>Chromatography, Affinity - methods</topic><topic>Dna, deoxyribonucleoproteins</topic><topic>DNA, Superhelical - chemistry</topic><topic>DNA, Superhelical - isolation & purification</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrogen-Ion Concentration</topic><topic>Methods. Procedures. Technologies</topic><topic>Models, Chemical</topic><topic>Nucleic acids</topic><topic>Others</topic><topic>Plasmids - chemistry</topic><topic>Plasmids - isolation & purification</topic><topic>Supercoiled plasmid DNA</topic><topic>Various methods and equipments</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sousa, A.</creatorcontrib><creatorcontrib>Bicho, D.</creatorcontrib><creatorcontrib>Tomaz, C.T.</creatorcontrib><creatorcontrib>Sousa, F.</creatorcontrib><creatorcontrib>Queiroz, J.A.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aqualine</collection><collection>Nucleic Acids Abstracts</collection><collection>Water Resources Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Journal of Chromatography A</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sousa, A.</au><au>Bicho, D.</au><au>Tomaz, C.T.</au><au>Sousa, F.</au><au>Queiroz, J.A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Performance of a non-grafted monolithic support for purification of supercoiled plasmid DNA</atitle><jtitle>Journal of Chromatography A</jtitle><addtitle>J Chromatogr A</addtitle><date>2011-04-01</date><risdate>2011</risdate><volume>1218</volume><issue>13</issue><spage>1701</spage><epage>1706</epage><pages>1701-1706</pages><issn>0021-9673</issn><eissn>1873-3778</eissn><coden>JOCRAM</coden><abstract>The use of therapeutics based on plasmid DNA (pDNA) relies on procedures that efficiently produce and purify the supercoiled (sc) plasmid isoform. Several chromatographic methods have been applied for the sc plasmid purification, but with most of them it is not possible to obtain the required purity degree and the majority of the supports used present low capacity to bind the plasmid molecules. However, the chromatographic monolithic supports are an interesting alternative to conventional supports due to their excellent mass transfer properties and their high binding capacity for pDNA. The separation of pDNA isoforms, using short non-grafted monolithic column with CarbonylDiImidazole (CDI) functional groups, is described in the current work. The effect of different flow rates on plasmid isoforms separation was also verified. Several breakthrough experiments were designed to study the effect of different parameters such as pDNA topology and concentration as well as flow rate on the monolithic support binding capacity. One of the most striking results is related to the specific recognition of the sc isoform by this CDI monolith, without flow rate dependence. Additionally, the binding capacity has been found to be significantly higher for sc plasmid, probably because of its compact structure, being also improved when using feedstock with increased plasmid concentrations and decreased linear velocity. In fact, this new monolithic support arises as a powerful instrument on the sc pDNA purification for further clinical applications.</abstract><cop>Amsterdam</cop><pub>Elsevier B.V</pub><pmid>21251661</pmid><doi>10.1016/j.chroma.2010.12.018</doi><tpages>6</tpages></addata></record> |
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subjects | Affinity chromatography Ammonium Sulfate Analytical, structural and metabolic biochemistry Binding capacity Biological and medical sciences Biotechnology Breakthrough curves CDI monolithic column Chemical Phenomena Chromatography, Affinity - methods Dna, deoxyribonucleoproteins DNA, Superhelical - chemistry DNA, Superhelical - isolation & purification Fundamental and applied biological sciences. Psychology Hydrogen-Ion Concentration Methods. Procedures. Technologies Models, Chemical Nucleic acids Others Plasmids - chemistry Plasmids - isolation & purification Supercoiled plasmid DNA Various methods and equipments |
title | Performance of a non-grafted monolithic support for purification of supercoiled plasmid DNA |
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