Averaging in vitro cardiac field potential recordings obtained with microelectrode arrays
Abstract Extracellular field potential (FP) recordings with microelectrode arrays (MEAs) from cardiomyocyte cultures offer a non-invasive way of studying the electrophysiological properties of these cells at the population level. Several studies have examined the FP properties of cardiomyocytes of v...
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Veröffentlicht in: | Computer methods and programs in biomedicine 2011-11, Vol.104 (2), p.199-205 |
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creator | Kujala, Ville J Jimenez, Zaida C Väisänen, Juho Tanskanen, Jarno M.A Kerkelä, Erja Hyttinen, Jari Aalto-Setälä, Katriina |
description | Abstract Extracellular field potential (FP) recordings with microelectrode arrays (MEAs) from cardiomyocyte cultures offer a non-invasive way of studying the electrophysiological properties of these cells at the population level. Several studies have examined the FP properties of cardiomyocytes of various origins, including stem cell-derived cardiomyocytes. This focus reflects growing importance and interest in the field of MEA. High-quality cardiac FP signals are often difficult to obtain, especially from stem cell-derived cardiomyocyte cultures, which represent an important new field in cardiac electrophysiology. One way to improve the quality of these recordings is to average the cardiac FP signals. To date, however, no studies have examined the effect of averaging on cardiac FP signals. We report here that cardiac FP averaging can yield higher-quality signals than original individual FPs, and therefore promise more accurate detection of different phases and analysis of the cardiac FP signal. Averaged signals improved the signal-to-noise ratio (SNR), and obtaining reliable averages required approximately 50 cardiac cycles. We therefore propose that routine cardiac FP averaging can serve as a tool to compare the effects of different experimental conditions or stimuli on the properties of cardiac FPs. |
doi_str_mv | 10.1016/j.cmpb.2011.04.001 |
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Several studies have examined the FP properties of cardiomyocytes of various origins, including stem cell-derived cardiomyocytes. This focus reflects growing importance and interest in the field of MEA. High-quality cardiac FP signals are often difficult to obtain, especially from stem cell-derived cardiomyocyte cultures, which represent an important new field in cardiac electrophysiology. One way to improve the quality of these recordings is to average the cardiac FP signals. To date, however, no studies have examined the effect of averaging on cardiac FP signals. We report here that cardiac FP averaging can yield higher-quality signals than original individual FPs, and therefore promise more accurate detection of different phases and analysis of the cardiac FP signal. Averaged signals improved the signal-to-noise ratio (SNR), and obtaining reliable averages required approximately 50 cardiac cycles. We therefore propose that routine cardiac FP averaging can serve as a tool to compare the effects of different experimental conditions or stimuli on the properties of cardiac FPs.</description><identifier>ISSN: 0169-2607</identifier><identifier>EISSN: 1872-7565</identifier><identifier>DOI: 10.1016/j.cmpb.2011.04.001</identifier><identifier>PMID: 21645941</identifier><language>eng</language><publisher>Kidlington: Elsevier Ireland Ltd</publisher><subject>Arrays ; Averaging ; Biological and medical sciences ; Cardiomyocyte ; Culture ; Electrocardiography - methods ; Embryonic Stem Cells - cytology ; Field potential ; Filled plastics ; Heart - physiology ; Humans ; In Vitro Techniques ; Internal Medicine ; Medical sciences ; Microelectrode array ; Microelectrodes ; Other ; Phases ; Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects) ; Recording ; Signal-To-Noise Ratio ; Stimuli ; Technology. Biomaterials. Equipments. Material. Instrumentation</subject><ispartof>Computer methods and programs in biomedicine, 2011-11, Vol.104 (2), p.199-205</ispartof><rights>Elsevier Ireland Ltd</rights><rights>2011 Elsevier Ireland Ltd</rights><rights>2015 INIST-CNRS</rights><rights>Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c505t-95a9032f190fa5009b808d86c5267b61001e2b414b8517449622923cd558956f3</citedby><cites>FETCH-LOGICAL-c505t-95a9032f190fa5009b808d86c5267b61001e2b414b8517449622923cd558956f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.cmpb.2011.04.001$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24697733$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21645941$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kujala, Ville J</creatorcontrib><creatorcontrib>Jimenez, Zaida C</creatorcontrib><creatorcontrib>Väisänen, Juho</creatorcontrib><creatorcontrib>Tanskanen, Jarno M.A</creatorcontrib><creatorcontrib>Kerkelä, Erja</creatorcontrib><creatorcontrib>Hyttinen, Jari</creatorcontrib><creatorcontrib>Aalto-Setälä, Katriina</creatorcontrib><title>Averaging in vitro cardiac field potential recordings obtained with microelectrode arrays</title><title>Computer methods and programs in biomedicine</title><addtitle>Comput Methods Programs Biomed</addtitle><description>Abstract Extracellular field potential (FP) recordings with microelectrode arrays (MEAs) from cardiomyocyte cultures offer a non-invasive way of studying the electrophysiological properties of these cells at the population level. Several studies have examined the FP properties of cardiomyocytes of various origins, including stem cell-derived cardiomyocytes. This focus reflects growing importance and interest in the field of MEA. High-quality cardiac FP signals are often difficult to obtain, especially from stem cell-derived cardiomyocyte cultures, which represent an important new field in cardiac electrophysiology. One way to improve the quality of these recordings is to average the cardiac FP signals. To date, however, no studies have examined the effect of averaging on cardiac FP signals. We report here that cardiac FP averaging can yield higher-quality signals than original individual FPs, and therefore promise more accurate detection of different phases and analysis of the cardiac FP signal. Averaged signals improved the signal-to-noise ratio (SNR), and obtaining reliable averages required approximately 50 cardiac cycles. We therefore propose that routine cardiac FP averaging can serve as a tool to compare the effects of different experimental conditions or stimuli on the properties of cardiac FPs.</description><subject>Arrays</subject><subject>Averaging</subject><subject>Biological and medical sciences</subject><subject>Cardiomyocyte</subject><subject>Culture</subject><subject>Electrocardiography - methods</subject><subject>Embryonic Stem Cells - cytology</subject><subject>Field potential</subject><subject>Filled plastics</subject><subject>Heart - physiology</subject><subject>Humans</subject><subject>In Vitro Techniques</subject><subject>Internal Medicine</subject><subject>Medical sciences</subject><subject>Microelectrode array</subject><subject>Microelectrodes</subject><subject>Other</subject><subject>Phases</subject><subject>Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects)</subject><subject>Recording</subject><subject>Signal-To-Noise Ratio</subject><subject>Stimuli</subject><subject>Technology. Biomaterials. Equipments. Material. 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Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects)</topic><topic>Recording</topic><topic>Signal-To-Noise Ratio</topic><topic>Stimuli</topic><topic>Technology. Biomaterials. Equipments. Material. Instrumentation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kujala, Ville J</creatorcontrib><creatorcontrib>Jimenez, Zaida C</creatorcontrib><creatorcontrib>Väisänen, Juho</creatorcontrib><creatorcontrib>Tanskanen, Jarno M.A</creatorcontrib><creatorcontrib>Kerkelä, Erja</creatorcontrib><creatorcontrib>Hyttinen, Jari</creatorcontrib><creatorcontrib>Aalto-Setälä, Katriina</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Computer methods and programs in biomedicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kujala, Ville J</au><au>Jimenez, Zaida C</au><au>Väisänen, Juho</au><au>Tanskanen, Jarno M.A</au><au>Kerkelä, Erja</au><au>Hyttinen, Jari</au><au>Aalto-Setälä, Katriina</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Averaging in vitro cardiac field potential recordings obtained with microelectrode arrays</atitle><jtitle>Computer methods and programs in biomedicine</jtitle><addtitle>Comput Methods Programs Biomed</addtitle><date>2011-11-01</date><risdate>2011</risdate><volume>104</volume><issue>2</issue><spage>199</spage><epage>205</epage><pages>199-205</pages><issn>0169-2607</issn><eissn>1872-7565</eissn><abstract>Abstract Extracellular field potential (FP) recordings with microelectrode arrays (MEAs) from cardiomyocyte cultures offer a non-invasive way of studying the electrophysiological properties of these cells at the population level. Several studies have examined the FP properties of cardiomyocytes of various origins, including stem cell-derived cardiomyocytes. This focus reflects growing importance and interest in the field of MEA. High-quality cardiac FP signals are often difficult to obtain, especially from stem cell-derived cardiomyocyte cultures, which represent an important new field in cardiac electrophysiology. One way to improve the quality of these recordings is to average the cardiac FP signals. To date, however, no studies have examined the effect of averaging on cardiac FP signals. We report here that cardiac FP averaging can yield higher-quality signals than original individual FPs, and therefore promise more accurate detection of different phases and analysis of the cardiac FP signal. Averaged signals improved the signal-to-noise ratio (SNR), and obtaining reliable averages required approximately 50 cardiac cycles. We therefore propose that routine cardiac FP averaging can serve as a tool to compare the effects of different experimental conditions or stimuli on the properties of cardiac FPs.</abstract><cop>Kidlington</cop><pub>Elsevier Ireland Ltd</pub><pmid>21645941</pmid><doi>10.1016/j.cmpb.2011.04.001</doi><tpages>7</tpages></addata></record> |
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subjects | Arrays Averaging Biological and medical sciences Cardiomyocyte Culture Electrocardiography - methods Embryonic Stem Cells - cytology Field potential Filled plastics Heart - physiology Humans In Vitro Techniques Internal Medicine Medical sciences Microelectrode array Microelectrodes Other Phases Radiotherapy. Instrumental treatment. Physiotherapy. Reeducation. Rehabilitation, orthophony, crenotherapy. Diet therapy and various other treatments (general aspects) Recording Signal-To-Noise Ratio Stimuli Technology. Biomaterials. Equipments. Material. Instrumentation |
title | Averaging in vitro cardiac field potential recordings obtained with microelectrode arrays |
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