Attenuation of ionic interactions profoundly lowers the kinetic thermal stability of Pyrococcus furiosus triosephosphate isomerase
We investigate here the high structural stability of Pyrococcus furiosus triosephosphate isomerase (PfuTIM) by exploring the effects – upon the protein's structure and kinetic thermal stability – of modulation of its ionic interactions through pH variations, and mutations. PfuTIM shows comparab...
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Veröffentlicht in: | Biochimica et biophysica acta 2009-06, Vol.1794 (6), p.905-912 |
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description | We investigate here the high structural stability of
Pyrococcus furiosus triosephosphate isomerase (PfuTIM) by exploring the effects – upon the protein's structure and kinetic thermal stability – of modulation of its ionic interactions through pH variations, and mutations. PfuTIM shows comparable structural contents at pH 3.0, 7.0 and 10.0. However, at pH 3.0, subtle changes are seen in the protein's surface hydrophobicity and association status, and its kinetic thermal stability is profoundly reduced (as evidenced by its facile heat- and cold-mediated denaturation, characterized by a high degree of hysteresis and irreversibility). Increase in ionic strength through addition of salt counters the reduction of stability, and reversal of pH facilitates partial refolding. Further, a mutated form of PfuTIM (mPfuTIM) lacking 4 key charged residues involved in ionic interactions displays a structural content identical to PfuTIM but profound reduction in kinetic stability to thermal and chemical denaturation, as well as evidence of partial unfolding at temperatures between 90 °C and 100 °C, unlike PfuTIM. We conclude, therefore, that ionic interactions (which are known to determine protein thermodynamic stability) can also contribute significantly to protein kinetic thermal stability. |
doi_str_mv | 10.1016/j.bbapap.2009.03.005 |
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Pyrococcus furiosus triosephosphate isomerase (PfuTIM) by exploring the effects – upon the protein's structure and kinetic thermal stability – of modulation of its ionic interactions through pH variations, and mutations. PfuTIM shows comparable structural contents at pH 3.0, 7.0 and 10.0. However, at pH 3.0, subtle changes are seen in the protein's surface hydrophobicity and association status, and its kinetic thermal stability is profoundly reduced (as evidenced by its facile heat- and cold-mediated denaturation, characterized by a high degree of hysteresis and irreversibility). Increase in ionic strength through addition of salt counters the reduction of stability, and reversal of pH facilitates partial refolding. Further, a mutated form of PfuTIM (mPfuTIM) lacking 4 key charged residues involved in ionic interactions displays a structural content identical to PfuTIM but profound reduction in kinetic stability to thermal and chemical denaturation, as well as evidence of partial unfolding at temperatures between 90 °C and 100 °C, unlike PfuTIM. We conclude, therefore, that ionic interactions (which are known to determine protein thermodynamic stability) can also contribute significantly to protein kinetic thermal stability.</description><identifier>ISSN: 1570-9639</identifier><identifier>ISSN: 0006-3002</identifier><identifier>EISSN: 1878-1454</identifier><identifier>DOI: 10.1016/j.bbapap.2009.03.005</identifier><identifier>PMID: 19306952</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Cold denaturation ; Enzyme Stability ; Hydrogen-Ion Concentration ; Kinetic stability ; Kinetics ; Mutagenesis ; Protein thermal stability ; Protein unfolding ; Pyrococcus furiosus ; Pyrococcus furiosus - enzymology ; Salt bridge and ionic interaction ; Spectrometry, Fluorescence ; Triose-Phosphate Isomerase - genetics ; Triose-Phosphate Isomerase - metabolism</subject><ispartof>Biochimica et biophysica acta, 2009-06, Vol.1794 (6), p.905-912</ispartof><rights>2009 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-95271e074be66a87b507b5c37e284430f0d938cd944dfb914de226beb321a8983</citedby><cites>FETCH-LOGICAL-c423t-95271e074be66a87b507b5c37e284430f0d938cd944dfb914de226beb321a8983</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.bbapap.2009.03.005$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19306952$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chandrayan, Sanjeev Kumar</creatorcontrib><creatorcontrib>Guptasarma, Purnananda</creatorcontrib><title>Attenuation of ionic interactions profoundly lowers the kinetic thermal stability of Pyrococcus furiosus triosephosphate isomerase</title><title>Biochimica et biophysica acta</title><addtitle>Biochim Biophys Acta</addtitle><description>We investigate here the high structural stability of
Pyrococcus furiosus triosephosphate isomerase (PfuTIM) by exploring the effects – upon the protein's structure and kinetic thermal stability – of modulation of its ionic interactions through pH variations, and mutations. PfuTIM shows comparable structural contents at pH 3.0, 7.0 and 10.0. However, at pH 3.0, subtle changes are seen in the protein's surface hydrophobicity and association status, and its kinetic thermal stability is profoundly reduced (as evidenced by its facile heat- and cold-mediated denaturation, characterized by a high degree of hysteresis and irreversibility). Increase in ionic strength through addition of salt counters the reduction of stability, and reversal of pH facilitates partial refolding. Further, a mutated form of PfuTIM (mPfuTIM) lacking 4 key charged residues involved in ionic interactions displays a structural content identical to PfuTIM but profound reduction in kinetic stability to thermal and chemical denaturation, as well as evidence of partial unfolding at temperatures between 90 °C and 100 °C, unlike PfuTIM. We conclude, therefore, that ionic interactions (which are known to determine protein thermodynamic stability) can also contribute significantly to protein kinetic thermal stability.</description><subject>Cold denaturation</subject><subject>Enzyme Stability</subject><subject>Hydrogen-Ion Concentration</subject><subject>Kinetic stability</subject><subject>Kinetics</subject><subject>Mutagenesis</subject><subject>Protein thermal stability</subject><subject>Protein unfolding</subject><subject>Pyrococcus furiosus</subject><subject>Pyrococcus furiosus - enzymology</subject><subject>Salt bridge and ionic interaction</subject><subject>Spectrometry, Fluorescence</subject><subject>Triose-Phosphate Isomerase - genetics</subject><subject>Triose-Phosphate Isomerase - metabolism</subject><issn>1570-9639</issn><issn>0006-3002</issn><issn>1878-1454</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2009</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kU2L1TAUhoMozjj6D0Sy0lXryUebZiMMg18woAtdhzQ95ebaNjVJHe7WX27KveBuFuF9Cc_5SF5CXjOoGbD2_bHue7vateYAugZRAzRPyDXrVFcx2cinxTcKKt0KfUVepHQE4KBU85xcMS2g1Q2_Jn9vc8Zls9mHhYaRFvGO-iVjtG6_THSNYQzbMkwnOoUHjInmA9JffsFc0OLjbCeasu395PNp7_L9FIMLzm2Jjlv0IRWTd8X1ENJ6sBmpT2EuQxK-JM9GOyV8ddEb8vPTxx93X6r7b5-_3t3eV05ykauyrmIISvbYtrZTfQPlOKGQd1IKGGHQonODlnIYe83kgJy3PfaCM9vpTtyQd-e-5UG_N0zZzD45nCa7YNiS6bRmijEtC_n2UZJDq7iUrIDyDLoYUoo4mjX62caTYWD2lMzRnFMye0oGhCkplbI3l_5bP-Pwv-gSSwE-nAEs__HHYzTJeVwcDj6iy2YI_vEJ_wAv1aiT</recordid><startdate>20090601</startdate><enddate>20090601</enddate><creator>Chandrayan, Sanjeev Kumar</creator><creator>Guptasarma, Purnananda</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope></search><sort><creationdate>20090601</creationdate><title>Attenuation of ionic interactions profoundly lowers the kinetic thermal stability of Pyrococcus furiosus triosephosphate isomerase</title><author>Chandrayan, Sanjeev Kumar ; Guptasarma, Purnananda</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-95271e074be66a87b507b5c37e284430f0d938cd944dfb914de226beb321a8983</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Cold denaturation</topic><topic>Enzyme Stability</topic><topic>Hydrogen-Ion Concentration</topic><topic>Kinetic stability</topic><topic>Kinetics</topic><topic>Mutagenesis</topic><topic>Protein thermal stability</topic><topic>Protein unfolding</topic><topic>Pyrococcus furiosus</topic><topic>Pyrococcus furiosus - enzymology</topic><topic>Salt bridge and ionic interaction</topic><topic>Spectrometry, Fluorescence</topic><topic>Triose-Phosphate Isomerase - genetics</topic><topic>Triose-Phosphate Isomerase - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chandrayan, Sanjeev Kumar</creatorcontrib><creatorcontrib>Guptasarma, Purnananda</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Biochimica et biophysica acta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chandrayan, Sanjeev Kumar</au><au>Guptasarma, Purnananda</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Attenuation of ionic interactions profoundly lowers the kinetic thermal stability of Pyrococcus furiosus triosephosphate isomerase</atitle><jtitle>Biochimica et biophysica acta</jtitle><addtitle>Biochim Biophys Acta</addtitle><date>2009-06-01</date><risdate>2009</risdate><volume>1794</volume><issue>6</issue><spage>905</spage><epage>912</epage><pages>905-912</pages><issn>1570-9639</issn><issn>0006-3002</issn><eissn>1878-1454</eissn><abstract>We investigate here the high structural stability of
Pyrococcus furiosus triosephosphate isomerase (PfuTIM) by exploring the effects – upon the protein's structure and kinetic thermal stability – of modulation of its ionic interactions through pH variations, and mutations. PfuTIM shows comparable structural contents at pH 3.0, 7.0 and 10.0. However, at pH 3.0, subtle changes are seen in the protein's surface hydrophobicity and association status, and its kinetic thermal stability is profoundly reduced (as evidenced by its facile heat- and cold-mediated denaturation, characterized by a high degree of hysteresis and irreversibility). Increase in ionic strength through addition of salt counters the reduction of stability, and reversal of pH facilitates partial refolding. Further, a mutated form of PfuTIM (mPfuTIM) lacking 4 key charged residues involved in ionic interactions displays a structural content identical to PfuTIM but profound reduction in kinetic stability to thermal and chemical denaturation, as well as evidence of partial unfolding at temperatures between 90 °C and 100 °C, unlike PfuTIM. We conclude, therefore, that ionic interactions (which are known to determine protein thermodynamic stability) can also contribute significantly to protein kinetic thermal stability.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>19306952</pmid><doi>10.1016/j.bbapap.2009.03.005</doi><tpages>8</tpages></addata></record> |
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subjects | Cold denaturation Enzyme Stability Hydrogen-Ion Concentration Kinetic stability Kinetics Mutagenesis Protein thermal stability Protein unfolding Pyrococcus furiosus Pyrococcus furiosus - enzymology Salt bridge and ionic interaction Spectrometry, Fluorescence Triose-Phosphate Isomerase - genetics Triose-Phosphate Isomerase - metabolism |
title | Attenuation of ionic interactions profoundly lowers the kinetic thermal stability of Pyrococcus furiosus triosephosphate isomerase |
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