Hidden Fungi, Emergent Properties: Endophytes and Microbiomes

Endophytes are microorganisms that live within plant tissues without causing symptoms of disease. They are important components of plant microbiomes. Endophytes interact with, and overlap in function with, other core microbial groups that colonize plant tissues, e.g., mycorrhizal fungi, pathogens, e...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Annual review of phytopathology 2011-01, Vol.49 (1), p.291-315
Hauptverfasser: Porras-Alfaro, Andrea, Bayman, Paul
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 315
container_issue 1
container_start_page 291
container_title Annual review of phytopathology
container_volume 49
creator Porras-Alfaro, Andrea
Bayman, Paul
description Endophytes are microorganisms that live within plant tissues without causing symptoms of disease. They are important components of plant microbiomes. Endophytes interact with, and overlap in function with, other core microbial groups that colonize plant tissues, e.g., mycorrhizal fungi, pathogens, epiphytes, and saprotrophs. Some fungal endophytes affect plant growth and plant responses to pathogens, herbivores, and environmental change; others produce useful or interesting secondary metabolites. Here, we focus on new techniques and approaches that can provide an integrative understanding of the role of fungal endophytes in the plant microbiome. Clavicipitaceous endophytes of grasses are not considered because they have unique properties distinct from other endophytes. Hidden from view and often overlooked, endophytes are emerging as their diversity, importance for plant growth and survival, and interactions with other organisms are revealed.
doi_str_mv 10.1146/annurev-phyto-080508-081831
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_899163970</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>883853087</sourcerecordid><originalsourceid>FETCH-LOGICAL-c442t-649330e44eb80c3c667accb7323a3e666fbee7bebcdb19830c1e292d2348c0c63</originalsourceid><addsrcrecordid>eNqFkU1Lw0AQhhdRbK3-BQ148GJ09iObjeJBSqtCRUF7XjabSY00Sd1NhP57UxPw6GkO87wzzDOEnFO4olTIa1NVrcPvcPOxbeoQFESgukIVp3tkTCMRhYxCvE_GAFKGgik5IkfefwJAwgU_JCOaiK7HkzG5eyyyDKtg3lar4jKYlehWWDXBq6s36JoC_U0wq7J6twx9YKoseC6sq9OiLtEfk4PcrD2eDHVClvPZ-_QxXLw8PE3vF6EVgjWhFAnngEJgqsByK2VsrE1jzrjhKKXMU8Q4xdRmKU0UB0uRJSxjXCgLVvIJuejnblz91aJvdFl4i-u1qbBuvVZJQrtzYvifVFxFHFTckbc92V3jvcNcb1xRGrfVFPROtB5E61_Ruhete9Fd-nTY06YlZn_ZwWwHnPVAbmptVq7wevnGgEbdF4BBJPkPfkyGrA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>883853087</pqid></control><display><type>article</type><title>Hidden Fungi, Emergent Properties: Endophytes and Microbiomes</title><source>Annual Reviews Complete A-Z List</source><source>MEDLINE</source><creator>Porras-Alfaro, Andrea ; Bayman, Paul</creator><creatorcontrib>Porras-Alfaro, Andrea ; Bayman, Paul</creatorcontrib><description>Endophytes are microorganisms that live within plant tissues without causing symptoms of disease. They are important components of plant microbiomes. Endophytes interact with, and overlap in function with, other core microbial groups that colonize plant tissues, e.g., mycorrhizal fungi, pathogens, epiphytes, and saprotrophs. Some fungal endophytes affect plant growth and plant responses to pathogens, herbivores, and environmental change; others produce useful or interesting secondary metabolites. Here, we focus on new techniques and approaches that can provide an integrative understanding of the role of fungal endophytes in the plant microbiome. Clavicipitaceous endophytes of grasses are not considered because they have unique properties distinct from other endophytes. Hidden from view and often overlooked, endophytes are emerging as their diversity, importance for plant growth and survival, and interactions with other organisms are revealed.</description><identifier>ISSN: 0066-4286</identifier><identifier>EISSN: 1545-2107</identifier><identifier>DOI: 10.1146/annurev-phyto-080508-081831</identifier><identifier>PMID: 19400639</identifier><language>eng</language><publisher>United States: Annual Reviews, Inc</publisher><subject>Animals ; Biodegradation, Environmental ; Climate Change ; endophytes ; Endophytes - genetics ; Endophytes - isolation &amp; purification ; Endophytes - physiology ; epiphytes ; Fungi - genetics ; Fungi - isolation &amp; purification ; Fungi - physiology ; Genetic Variation ; grasses ; herbivores ; Insecta ; Metagenome - physiology ; microbiome ; Mycorrhizae - genetics ; Mycorrhizae - isolation &amp; purification ; Mycorrhizae - physiology ; mycorrhizal fungi ; new methods ; pathogens ; Pest Control, Biological ; plant growth ; plant response ; plant tissues ; Plants - microbiology ; saprotrophs ; secondary metabolites ; Systems Biology</subject><ispartof>Annual review of phytopathology, 2011-01, Vol.49 (1), p.291-315</ispartof><rights>Copyright © 2011 by Annual Reviews. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-649330e44eb80c3c667accb7323a3e666fbee7bebcdb19830c1e292d2348c0c63</citedby><cites>FETCH-LOGICAL-c442t-649330e44eb80c3c667accb7323a3e666fbee7bebcdb19830c1e292d2348c0c63</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,4182,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/19400639$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Porras-Alfaro, Andrea</creatorcontrib><creatorcontrib>Bayman, Paul</creatorcontrib><title>Hidden Fungi, Emergent Properties: Endophytes and Microbiomes</title><title>Annual review of phytopathology</title><addtitle>Annu Rev Phytopathol</addtitle><description>Endophytes are microorganisms that live within plant tissues without causing symptoms of disease. They are important components of plant microbiomes. Endophytes interact with, and overlap in function with, other core microbial groups that colonize plant tissues, e.g., mycorrhizal fungi, pathogens, epiphytes, and saprotrophs. Some fungal endophytes affect plant growth and plant responses to pathogens, herbivores, and environmental change; others produce useful or interesting secondary metabolites. Here, we focus on new techniques and approaches that can provide an integrative understanding of the role of fungal endophytes in the plant microbiome. Clavicipitaceous endophytes of grasses are not considered because they have unique properties distinct from other endophytes. Hidden from view and often overlooked, endophytes are emerging as their diversity, importance for plant growth and survival, and interactions with other organisms are revealed.</description><subject>Animals</subject><subject>Biodegradation, Environmental</subject><subject>Climate Change</subject><subject>endophytes</subject><subject>Endophytes - genetics</subject><subject>Endophytes - isolation &amp; purification</subject><subject>Endophytes - physiology</subject><subject>epiphytes</subject><subject>Fungi - genetics</subject><subject>Fungi - isolation &amp; purification</subject><subject>Fungi - physiology</subject><subject>Genetic Variation</subject><subject>grasses</subject><subject>herbivores</subject><subject>Insecta</subject><subject>Metagenome - physiology</subject><subject>microbiome</subject><subject>Mycorrhizae - genetics</subject><subject>Mycorrhizae - isolation &amp; purification</subject><subject>Mycorrhizae - physiology</subject><subject>mycorrhizal fungi</subject><subject>new methods</subject><subject>pathogens</subject><subject>Pest Control, Biological</subject><subject>plant growth</subject><subject>plant response</subject><subject>plant tissues</subject><subject>Plants - microbiology</subject><subject>saprotrophs</subject><subject>secondary metabolites</subject><subject>Systems Biology</subject><issn>0066-4286</issn><issn>1545-2107</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1Lw0AQhhdRbK3-BQ148GJ09iObjeJBSqtCRUF7XjabSY00Sd1NhP57UxPw6GkO87wzzDOEnFO4olTIa1NVrcPvcPOxbeoQFESgukIVp3tkTCMRhYxCvE_GAFKGgik5IkfefwJAwgU_JCOaiK7HkzG5eyyyDKtg3lar4jKYlehWWDXBq6s36JoC_U0wq7J6twx9YKoseC6sq9OiLtEfk4PcrD2eDHVClvPZ-_QxXLw8PE3vF6EVgjWhFAnngEJgqsByK2VsrE1jzrjhKKXMU8Q4xdRmKU0UB0uRJSxjXCgLVvIJuejnblz91aJvdFl4i-u1qbBuvVZJQrtzYvifVFxFHFTckbc92V3jvcNcb1xRGrfVFPROtB5E61_Ruhete9Fd-nTY06YlZn_ZwWwHnPVAbmptVq7wevnGgEbdF4BBJPkPfkyGrA</recordid><startdate>20110101</startdate><enddate>20110101</enddate><creator>Porras-Alfaro, Andrea</creator><creator>Bayman, Paul</creator><general>Annual Reviews, Inc</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope></search><sort><creationdate>20110101</creationdate><title>Hidden Fungi, Emergent Properties: Endophytes and Microbiomes</title><author>Porras-Alfaro, Andrea ; Bayman, Paul</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c442t-649330e44eb80c3c667accb7323a3e666fbee7bebcdb19830c1e292d2348c0c63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Animals</topic><topic>Biodegradation, Environmental</topic><topic>Climate Change</topic><topic>endophytes</topic><topic>Endophytes - genetics</topic><topic>Endophytes - isolation &amp; purification</topic><topic>Endophytes - physiology</topic><topic>epiphytes</topic><topic>Fungi - genetics</topic><topic>Fungi - isolation &amp; purification</topic><topic>Fungi - physiology</topic><topic>Genetic Variation</topic><topic>grasses</topic><topic>herbivores</topic><topic>Insecta</topic><topic>Metagenome - physiology</topic><topic>microbiome</topic><topic>Mycorrhizae - genetics</topic><topic>Mycorrhizae - isolation &amp; purification</topic><topic>Mycorrhizae - physiology</topic><topic>mycorrhizal fungi</topic><topic>new methods</topic><topic>pathogens</topic><topic>Pest Control, Biological</topic><topic>plant growth</topic><topic>plant response</topic><topic>plant tissues</topic><topic>Plants - microbiology</topic><topic>saprotrophs</topic><topic>secondary metabolites</topic><topic>Systems Biology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Porras-Alfaro, Andrea</creatorcontrib><creatorcontrib>Bayman, Paul</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Annual review of phytopathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Porras-Alfaro, Andrea</au><au>Bayman, Paul</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Hidden Fungi, Emergent Properties: Endophytes and Microbiomes</atitle><jtitle>Annual review of phytopathology</jtitle><addtitle>Annu Rev Phytopathol</addtitle><date>2011-01-01</date><risdate>2011</risdate><volume>49</volume><issue>1</issue><spage>291</spage><epage>315</epage><pages>291-315</pages><issn>0066-4286</issn><eissn>1545-2107</eissn><abstract>Endophytes are microorganisms that live within plant tissues without causing symptoms of disease. They are important components of plant microbiomes. Endophytes interact with, and overlap in function with, other core microbial groups that colonize plant tissues, e.g., mycorrhizal fungi, pathogens, epiphytes, and saprotrophs. Some fungal endophytes affect plant growth and plant responses to pathogens, herbivores, and environmental change; others produce useful or interesting secondary metabolites. Here, we focus on new techniques and approaches that can provide an integrative understanding of the role of fungal endophytes in the plant microbiome. Clavicipitaceous endophytes of grasses are not considered because they have unique properties distinct from other endophytes. Hidden from view and often overlooked, endophytes are emerging as their diversity, importance for plant growth and survival, and interactions with other organisms are revealed.</abstract><cop>United States</cop><pub>Annual Reviews, Inc</pub><pmid>19400639</pmid><doi>10.1146/annurev-phyto-080508-081831</doi><tpages>25</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0066-4286
ispartof Annual review of phytopathology, 2011-01, Vol.49 (1), p.291-315
issn 0066-4286
1545-2107
language eng
recordid cdi_proquest_miscellaneous_899163970
source Annual Reviews Complete A-Z List; MEDLINE
subjects Animals
Biodegradation, Environmental
Climate Change
endophytes
Endophytes - genetics
Endophytes - isolation & purification
Endophytes - physiology
epiphytes
Fungi - genetics
Fungi - isolation & purification
Fungi - physiology
Genetic Variation
grasses
herbivores
Insecta
Metagenome - physiology
microbiome
Mycorrhizae - genetics
Mycorrhizae - isolation & purification
Mycorrhizae - physiology
mycorrhizal fungi
new methods
pathogens
Pest Control, Biological
plant growth
plant response
plant tissues
Plants - microbiology
saprotrophs
secondary metabolites
Systems Biology
title Hidden Fungi, Emergent Properties: Endophytes and Microbiomes
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-06T02%3A30%3A51IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Hidden%20Fungi,%20Emergent%20Properties:%20Endophytes%20and%20Microbiomes&rft.jtitle=Annual%20review%20of%20phytopathology&rft.au=Porras-Alfaro,%20Andrea&rft.date=2011-01-01&rft.volume=49&rft.issue=1&rft.spage=291&rft.epage=315&rft.pages=291-315&rft.issn=0066-4286&rft.eissn=1545-2107&rft_id=info:doi/10.1146/annurev-phyto-080508-081831&rft_dat=%3Cproquest_cross%3E883853087%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=883853087&rft_id=info:pmid/19400639&rfr_iscdi=true