Candida middelhoveniana sp. nov., a new yeast species found on the rhizoplane of organically cultivated sugarcane
A novel yeast species within the Metschnikowiaceae is described based on a strain from the sugarcane ( Saccharum sp.) rhizoplane of an organically managed farm in Rio de Janeiro, Brazil. The D1/D2 domain of the large subunit ribosomal RNA gene sequence analysis showed that the closest related specie...
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| Veröffentlicht in: | Antonie van Leeuwenhoek 2011-10, Vol.100 (3), p.341-347 |
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| creator | de A. Ribeiro, José R. de Carvalho, Patrícia M. B. de S. Cabral, Anderson Macrae, Andrew Mendonça-Hagler, Leda C. S. Berbara, Ricardo L. L. Hagler, Allen N. |
| description | A novel yeast species within the Metschnikowiaceae is described based on a strain from the sugarcane (
Saccharum
sp.) rhizoplane of an organically managed farm in Rio de Janeiro, Brazil. The D1/D2 domain of the large subunit ribosomal RNA gene sequence analysis showed that the closest related species were
Candida tsuchiyae
with 86.2% and
Candida thailandica
with 86.7% of sequence identity. All three are anamorphs in the
Clavispora
opuntiae
clade. The name
Candida middelhoveniana
sp. nov. is proposed to accommodate this highly divergent organism with the type strain Instituto de Microbiologia, Universidade Federal do Rio de Janeiro (IMUFRJ) 51965
T
(=Centraalbureau voor Schimmelcultures (CBS) 12306
T
, Universidade Federal de Minas Gerais (UFMG)-70
T
, DBVPG 8031
T
) and the GenBank/EMBL/DDBJ accession number for the D1/D2 domain LSU rDNA sequence is FN428871. The Mycobank deposit number is MB 519801. |
| doi_str_mv | 10.1007/s10482-011-9589-7 |
| format | Article |
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Saccharum
sp.) rhizoplane of an organically managed farm in Rio de Janeiro, Brazil. The D1/D2 domain of the large subunit ribosomal RNA gene sequence analysis showed that the closest related species were
Candida tsuchiyae
with 86.2% and
Candida thailandica
with 86.7% of sequence identity. All three are anamorphs in the
Clavispora
opuntiae
clade. The name
Candida middelhoveniana
sp. nov. is proposed to accommodate this highly divergent organism with the type strain Instituto de Microbiologia, Universidade Federal do Rio de Janeiro (IMUFRJ) 51965
T
(=Centraalbureau voor Schimmelcultures (CBS) 12306
T
, Universidade Federal de Minas Gerais (UFMG)-70
T
, DBVPG 8031
T
) and the GenBank/EMBL/DDBJ accession number for the D1/D2 domain LSU rDNA sequence is FN428871. The Mycobank deposit number is MB 519801.</description><identifier>ISSN: 0003-6072</identifier><identifier>EISSN: 1572-9699</identifier><identifier>DOI: 10.1007/s10482-011-9589-7</identifier><identifier>PMID: 21614495</identifier><identifier>CODEN: ANLEDR</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Biological and medical sciences ; Biomedical and Life Sciences ; Brazil ; Candida - classification ; Candida - genetics ; Candida - isolation & purification ; DNA, Fungal - genetics ; DNA, Ribosomal - genetics ; Farm management ; Fundamental and applied biological sciences. Psychology ; Genetic diversity ; Life Sciences ; Medical Microbiology ; Microbiology ; Miscellaneous ; Molecular Sequence Data ; Mycology ; Organic Agriculture ; Organic farming ; Original Paper ; Phylogeny ; Plant Sciences ; Saccharum - growth & development ; Saccharum - microbiology ; Soil Microbiology ; Soil microorganisms ; Soil Science & Conservation ; Sugarcane ; Yeast ; Yeasts</subject><ispartof>Antonie van Leeuwenhoek, 2011-10, Vol.100 (3), p.341-347</ispartof><rights>Springer Science+Business Media B.V. 2011</rights><rights>2015 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c400t-61e3d16ffb61bc02147c3c81a6c91e9ca5c87c220fe51f72922610241dfb6b223</citedby><cites>FETCH-LOGICAL-c400t-61e3d16ffb61bc02147c3c81a6c91e9ca5c87c220fe51f72922610241dfb6b223</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10482-011-9589-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10482-011-9589-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=24523976$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21614495$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>de A. Ribeiro, José R.</creatorcontrib><creatorcontrib>de Carvalho, Patrícia M. B.</creatorcontrib><creatorcontrib>de S. Cabral, Anderson</creatorcontrib><creatorcontrib>Macrae, Andrew</creatorcontrib><creatorcontrib>Mendonça-Hagler, Leda C. S.</creatorcontrib><creatorcontrib>Berbara, Ricardo L. L.</creatorcontrib><creatorcontrib>Hagler, Allen N.</creatorcontrib><title>Candida middelhoveniana sp. nov., a new yeast species found on the rhizoplane of organically cultivated sugarcane</title><title>Antonie van Leeuwenhoek</title><addtitle>Antonie van Leeuwenhoek</addtitle><addtitle>Antonie Van Leeuwenhoek</addtitle><description>A novel yeast species within the Metschnikowiaceae is described based on a strain from the sugarcane (
Saccharum
sp.) rhizoplane of an organically managed farm in Rio de Janeiro, Brazil. The D1/D2 domain of the large subunit ribosomal RNA gene sequence analysis showed that the closest related species were
Candida tsuchiyae
with 86.2% and
Candida thailandica
with 86.7% of sequence identity. All three are anamorphs in the
Clavispora
opuntiae
clade. The name
Candida middelhoveniana
sp. nov. is proposed to accommodate this highly divergent organism with the type strain Instituto de Microbiologia, Universidade Federal do Rio de Janeiro (IMUFRJ) 51965
T
(=Centraalbureau voor Schimmelcultures (CBS) 12306
T
, Universidade Federal de Minas Gerais (UFMG)-70
T
, DBVPG 8031
T
) and the GenBank/EMBL/DDBJ accession number for the D1/D2 domain LSU rDNA sequence is FN428871. The Mycobank deposit number is MB 519801.</description><subject>Biological and medical sciences</subject><subject>Biomedical and Life Sciences</subject><subject>Brazil</subject><subject>Candida - classification</subject><subject>Candida - genetics</subject><subject>Candida - isolation & purification</subject><subject>DNA, Fungal - genetics</subject><subject>DNA, Ribosomal - genetics</subject><subject>Farm management</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Genetic diversity</subject><subject>Life Sciences</subject><subject>Medical Microbiology</subject><subject>Microbiology</subject><subject>Miscellaneous</subject><subject>Molecular Sequence Data</subject><subject>Mycology</subject><subject>Organic Agriculture</subject><subject>Organic farming</subject><subject>Original Paper</subject><subject>Phylogeny</subject><subject>Plant Sciences</subject><subject>Saccharum - growth & development</subject><subject>Saccharum - microbiology</subject><subject>Soil Microbiology</subject><subject>Soil microorganisms</subject><subject>Soil Science & Conservation</subject><subject>Sugarcane</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>0003-6072</issn><issn>1572-9699</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNp1kVuLUzEUhYMoTmf0B_giQZB58dTsnJxcHqV4gwFf9DmkubQZTpNOck6l_npTWh0QfNpk51t7L_ZC6BWQJRAi3lcgTNKOAHRqkKoTT9ACBkE7xZV6ihaEkL7jRNArdF3rfXsqLsVzdEWBA2NqWKCHlUkuOoN30Tk_bvPBp2iSwXW_xCkflu-wwcn_xEdv6tS63kZfcchzcjgnPG09Ltv4K-9HkzzOAeeyMSlaM45HbOdxigczeYfrvDHFNuYFehbMWP3LS71BPz59_L760t19-_x19eGus4yQqePgewc8hDWHtSUUmLC9lWC4VeCVNYOVwlJKgh8gCKoo5UAoA9cUa0r7G3R7nrsv-WH2ddK7WK0fTz7zXLVUhAuhBGvkm3_I-zyX1MxpKRUTggnZIDhDtuRaiw96X-LOlKMGok9p6HMauqWhT2lo0TSvL4Pn9c67v4o_52_A2wtgartYKCbZWB85NtBeCd44euZq-0obXx4d_n_7b5brogU</recordid><startdate>20111001</startdate><enddate>20111001</enddate><creator>de A. 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Ribeiro, José R.</au><au>de Carvalho, Patrícia M. B.</au><au>de S. Cabral, Anderson</au><au>Macrae, Andrew</au><au>Mendonça-Hagler, Leda C. S.</au><au>Berbara, Ricardo L. L.</au><au>Hagler, Allen N.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Candida middelhoveniana sp. nov., a new yeast species found on the rhizoplane of organically cultivated sugarcane</atitle><jtitle>Antonie van Leeuwenhoek</jtitle><stitle>Antonie van Leeuwenhoek</stitle><addtitle>Antonie Van Leeuwenhoek</addtitle><date>2011-10-01</date><risdate>2011</risdate><volume>100</volume><issue>3</issue><spage>341</spage><epage>347</epage><pages>341-347</pages><issn>0003-6072</issn><eissn>1572-9699</eissn><coden>ANLEDR</coden><abstract>A novel yeast species within the Metschnikowiaceae is described based on a strain from the sugarcane (
Saccharum
sp.) rhizoplane of an organically managed farm in Rio de Janeiro, Brazil. The D1/D2 domain of the large subunit ribosomal RNA gene sequence analysis showed that the closest related species were
Candida tsuchiyae
with 86.2% and
Candida thailandica
with 86.7% of sequence identity. All three are anamorphs in the
Clavispora
opuntiae
clade. The name
Candida middelhoveniana
sp. nov. is proposed to accommodate this highly divergent organism with the type strain Instituto de Microbiologia, Universidade Federal do Rio de Janeiro (IMUFRJ) 51965
T
(=Centraalbureau voor Schimmelcultures (CBS) 12306
T
, Universidade Federal de Minas Gerais (UFMG)-70
T
, DBVPG 8031
T
) and the GenBank/EMBL/DDBJ accession number for the D1/D2 domain LSU rDNA sequence is FN428871. The Mycobank deposit number is MB 519801.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>21614495</pmid><doi>10.1007/s10482-011-9589-7</doi><tpages>7</tpages></addata></record> |
| fulltext | fulltext |
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| ispartof | Antonie van Leeuwenhoek, 2011-10, Vol.100 (3), p.341-347 |
| issn | 0003-6072 1572-9699 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_890677974 |
| source | MEDLINE; SpringerLink Journals |
| subjects | Biological and medical sciences Biomedical and Life Sciences Brazil Candida - classification Candida - genetics Candida - isolation & purification DNA, Fungal - genetics DNA, Ribosomal - genetics Farm management Fundamental and applied biological sciences. Psychology Genetic diversity Life Sciences Medical Microbiology Microbiology Miscellaneous Molecular Sequence Data Mycology Organic Agriculture Organic farming Original Paper Phylogeny Plant Sciences Saccharum - growth & development Saccharum - microbiology Soil Microbiology Soil microorganisms Soil Science & Conservation Sugarcane Yeast Yeasts |
| title | Candida middelhoveniana sp. nov., a new yeast species found on the rhizoplane of organically cultivated sugarcane |
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