Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers
Polymerase chain reaction-based bovine papillomavirus (BPV) detection methods using a combination of two primer sets, subAup/subAdw and subBup/subBdw, have enabled the broad-spectrum detection of most characterized BPV types. These methods were used to detect the partial L1 nucleotide sequence of BP...
Gespeichert in:
| Veröffentlicht in: | Archives of virology 2011-07, Vol.156 (7), p.1281-1285 |
|---|---|
| Hauptverfasser: | , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 1285 |
|---|---|
| container_issue | 7 |
| container_start_page | 1281 |
| container_title | Archives of virology |
| container_volume | 156 |
| creator | Hatama, Shinichi Ishihara, Ryoko Ueda, Yasuko Kanno, Toru Uchida, Ikuo |
| description | Polymerase chain reaction-based bovine papillomavirus (BPV) detection methods using a combination of two primer sets, subAup/subAdw and subBup/subBdw, have enabled the broad-spectrum detection of most characterized BPV types. These methods were used to detect the partial L1 nucleotide sequence of BPV types from 167 cutaneous warts in cattle. Three potentially new viruses were detected using subBup/subBdw primer sets. The partial nucleotide sequences of these viruses were most similar to BPV-4, -6 and -9. Whole genome sequencing of one sample defines a new BPV type in the genus
Xipapillomavirus
, designated BPV-11. |
| doi_str_mv | 10.1007/s00705-011-0970-7 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_883040036</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2385825531</sourcerecordid><originalsourceid>FETCH-LOGICAL-p242t-981221fc756cf1d67216404a026e86c7aa8ddf1482cf9cbe0a75c828c4e8b8363</originalsourceid><addsrcrecordid>eNqNkU1P3DAQQC1EBQvtD-gFWVygB1OP49jOka-2SEjtAXq1vN4JGGXtECcr9tLfXq-WqhInLuOR52lGM4-Qz8DPgHP9NZfAa8YBGG80Z3qHzEBWghndmF0y4xWXzChu9slBzk-cl4-q3iP7AqSQWjQz8ucKR_RjSJGmljoa0wo7Ok-rEJH2rg9dl5ZuFYYp03HdIwWgpxe_fjOAL3TKIT7Ql_CG8ylmjLlkferWSxxcRuofXYh0QLcd1g-hFPJH8qF1XcZPr-8huf92fXf5g93-_H5zeX7LeiHFyBoDQkDrda18CwulBSjJpeNCoVFeO2cWixakEb5t_By507U3wniJZm4qVR2Sk23ffkjPE-bRLkP22HUuYpqyNaacqpznHaSW0Eij60IevyGf0jTEskaBKlODUhvo6BWa5ktc2M3ebljbfwYKILZALqX4gMP_LsDtRrPdarZFs91otrr6C2WomEE</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>873851665</pqid></control><display><type>article</type><title>Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers</title><source>MEDLINE</source><source>SpringerLink Journals - AutoHoldings</source><creator>Hatama, Shinichi ; Ishihara, Ryoko ; Ueda, Yasuko ; Kanno, Toru ; Uchida, Ikuo</creator><creatorcontrib>Hatama, Shinichi ; Ishihara, Ryoko ; Ueda, Yasuko ; Kanno, Toru ; Uchida, Ikuo</creatorcontrib><description>Polymerase chain reaction-based bovine papillomavirus (BPV) detection methods using a combination of two primer sets, subAup/subAdw and subBup/subBdw, have enabled the broad-spectrum detection of most characterized BPV types. These methods were used to detect the partial L1 nucleotide sequence of BPV types from 167 cutaneous warts in cattle. Three potentially new viruses were detected using subBup/subBdw primer sets. The partial nucleotide sequences of these viruses were most similar to BPV-4, -6 and -9. Whole genome sequencing of one sample defines a new BPV type in the genus
Xipapillomavirus
, designated BPV-11.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-011-0970-7</identifier><identifier>PMID: 21424729</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Animals ; Biomedical and Life Sciences ; Biomedicine ; Bovine papillomavirus ; Brief Report ; Cattle ; Cattle Diseases - virology ; Cloning ; Consensus Sequence ; DNA Primers - genetics ; Genes ; Genomes ; Infectious Diseases ; Medical Microbiology ; Molecular Sequence Data ; Phylogenetics ; Phylogeny ; Polymerase chain reaction ; Polymerase Chain Reaction - instrumentation ; Polymerase Chain Reaction - methods ; Skin ; Virology ; Warts ; Warts - veterinary ; Warts - virology ; Xipapillomavirus - classification ; Xipapillomavirus - genetics ; Xipapillomavirus - isolation & purification</subject><ispartof>Archives of virology, 2011-07, Vol.156 (7), p.1281-1285</ispartof><rights>Springer-Verlag 2011</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-p242t-981221fc756cf1d67216404a026e86c7aa8ddf1482cf9cbe0a75c828c4e8b8363</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-011-0970-7$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-011-0970-7$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27923,27924,41487,42556,51318</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/21424729$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hatama, Shinichi</creatorcontrib><creatorcontrib>Ishihara, Ryoko</creatorcontrib><creatorcontrib>Ueda, Yasuko</creatorcontrib><creatorcontrib>Kanno, Toru</creatorcontrib><creatorcontrib>Uchida, Ikuo</creatorcontrib><title>Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>Polymerase chain reaction-based bovine papillomavirus (BPV) detection methods using a combination of two primer sets, subAup/subAdw and subBup/subBdw, have enabled the broad-spectrum detection of most characterized BPV types. These methods were used to detect the partial L1 nucleotide sequence of BPV types from 167 cutaneous warts in cattle. Three potentially new viruses were detected using subBup/subBdw primer sets. The partial nucleotide sequences of these viruses were most similar to BPV-4, -6 and -9. Whole genome sequencing of one sample defines a new BPV type in the genus
Xipapillomavirus
, designated BPV-11.</description><subject>Animals</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Bovine papillomavirus</subject><subject>Brief Report</subject><subject>Cattle</subject><subject>Cattle Diseases - virology</subject><subject>Cloning</subject><subject>Consensus Sequence</subject><subject>DNA Primers - genetics</subject><subject>Genes</subject><subject>Genomes</subject><subject>Infectious Diseases</subject><subject>Medical Microbiology</subject><subject>Molecular Sequence Data</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Polymerase Chain Reaction - instrumentation</subject><subject>Polymerase Chain Reaction - methods</subject><subject>Skin</subject><subject>Virology</subject><subject>Warts</subject><subject>Warts - veterinary</subject><subject>Warts - virology</subject><subject>Xipapillomavirus - classification</subject><subject>Xipapillomavirus - genetics</subject><subject>Xipapillomavirus - isolation & purification</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2011</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkU1P3DAQQC1EBQvtD-gFWVygB1OP49jOka-2SEjtAXq1vN4JGGXtECcr9tLfXq-WqhInLuOR52lGM4-Qz8DPgHP9NZfAa8YBGG80Z3qHzEBWghndmF0y4xWXzChu9slBzk-cl4-q3iP7AqSQWjQz8ucKR_RjSJGmljoa0wo7Ok-rEJH2rg9dl5ZuFYYp03HdIwWgpxe_fjOAL3TKIT7Ql_CG8ylmjLlkferWSxxcRuofXYh0QLcd1g-hFPJH8qF1XcZPr-8huf92fXf5g93-_H5zeX7LeiHFyBoDQkDrda18CwulBSjJpeNCoVFeO2cWixakEb5t_By507U3wniJZm4qVR2Sk23ffkjPE-bRLkP22HUuYpqyNaacqpznHaSW0Eij60IevyGf0jTEskaBKlODUhvo6BWa5ktc2M3ebljbfwYKILZALqX4gMP_LsDtRrPdarZFs91otrr6C2WomEE</recordid><startdate>20110701</startdate><enddate>20110701</enddate><creator>Hatama, Shinichi</creator><creator>Ishihara, Ryoko</creator><creator>Ueda, Yasuko</creator><creator>Kanno, Toru</creator><creator>Uchida, Ikuo</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20110701</creationdate><title>Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers</title><author>Hatama, Shinichi ; Ishihara, Ryoko ; Ueda, Yasuko ; Kanno, Toru ; Uchida, Ikuo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p242t-981221fc756cf1d67216404a026e86c7aa8ddf1482cf9cbe0a75c828c4e8b8363</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2011</creationdate><topic>Animals</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Bovine papillomavirus</topic><topic>Brief Report</topic><topic>Cattle</topic><topic>Cattle Diseases - virology</topic><topic>Cloning</topic><topic>Consensus Sequence</topic><topic>DNA Primers - genetics</topic><topic>Genes</topic><topic>Genomes</topic><topic>Infectious Diseases</topic><topic>Medical Microbiology</topic><topic>Molecular Sequence Data</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Polymerase chain reaction</topic><topic>Polymerase Chain Reaction - instrumentation</topic><topic>Polymerase Chain Reaction - methods</topic><topic>Skin</topic><topic>Virology</topic><topic>Warts</topic><topic>Warts - veterinary</topic><topic>Warts - virology</topic><topic>Xipapillomavirus - classification</topic><topic>Xipapillomavirus - genetics</topic><topic>Xipapillomavirus - isolation & purification</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hatama, Shinichi</creatorcontrib><creatorcontrib>Ishihara, Ryoko</creatorcontrib><creatorcontrib>Ueda, Yasuko</creatorcontrib><creatorcontrib>Kanno, Toru</creatorcontrib><creatorcontrib>Uchida, Ikuo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hatama, Shinichi</au><au>Ishihara, Ryoko</au><au>Ueda, Yasuko</au><au>Kanno, Toru</au><au>Uchida, Ikuo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers</atitle><jtitle>Archives of virology</jtitle><stitle>Arch Virol</stitle><addtitle>Arch Virol</addtitle><date>2011-07-01</date><risdate>2011</risdate><volume>156</volume><issue>7</issue><spage>1281</spage><epage>1285</epage><pages>1281-1285</pages><issn>0304-8608</issn><eissn>1432-8798</eissn><abstract>Polymerase chain reaction-based bovine papillomavirus (BPV) detection methods using a combination of two primer sets, subAup/subAdw and subBup/subBdw, have enabled the broad-spectrum detection of most characterized BPV types. These methods were used to detect the partial L1 nucleotide sequence of BPV types from 167 cutaneous warts in cattle. Three potentially new viruses were detected using subBup/subBdw primer sets. The partial nucleotide sequences of these viruses were most similar to BPV-4, -6 and -9. Whole genome sequencing of one sample defines a new BPV type in the genus
Xipapillomavirus
, designated BPV-11.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><pmid>21424729</pmid><doi>10.1007/s00705-011-0970-7</doi><tpages>5</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0304-8608 |
| ispartof | Archives of virology, 2011-07, Vol.156 (7), p.1281-1285 |
| issn | 0304-8608 1432-8798 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_883040036 |
| source | MEDLINE; SpringerLink Journals - AutoHoldings |
| subjects | Animals Biomedical and Life Sciences Biomedicine Bovine papillomavirus Brief Report Cattle Cattle Diseases - virology Cloning Consensus Sequence DNA Primers - genetics Genes Genomes Infectious Diseases Medical Microbiology Molecular Sequence Data Phylogenetics Phylogeny Polymerase chain reaction Polymerase Chain Reaction - instrumentation Polymerase Chain Reaction - methods Skin Virology Warts Warts - veterinary Warts - virology Xipapillomavirus - classification Xipapillomavirus - genetics Xipapillomavirus - isolation & purification |
| title | Detection of a novel bovine papillomavirus type 11 (BPV-11) using xipapillomavirus consensus polymerase chain reaction primers |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-12T09%3A32%3A52IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Detection%20of%20a%20novel%20bovine%20papillomavirus%20type%2011%20(BPV-11)%20using%20xipapillomavirus%20consensus%20polymerase%20chain%20reaction%20primers&rft.jtitle=Archives%20of%20virology&rft.au=Hatama,%20Shinichi&rft.date=2011-07-01&rft.volume=156&rft.issue=7&rft.spage=1281&rft.epage=1285&rft.pages=1281-1285&rft.issn=0304-8608&rft.eissn=1432-8798&rft_id=info:doi/10.1007/s00705-011-0970-7&rft_dat=%3Cproquest_pubme%3E2385825531%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=873851665&rft_id=info:pmid/21424729&rfr_iscdi=true |