A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease

With an overall prevalence of 10–20%, gallstone disease (cholelithiasis) represents one of the most frequent and economically relevant health problems of industrialized countries 1 , 2 . We performed an association scan of >500,000 SNPs in 280 individuals with gallstones and 360 controls. A follo...

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Veröffentlicht in:Nature genetics 2007-08, Vol.39 (8), p.995-999
Hauptverfasser: Buch, Stephan, Schafmayer, Clemens, Völzke, Henry, Becker, Christian, Franke, Andre, von Eller-Eberstein, Huberta, Kluck, Christian, Bässmann, Ingelore, Brosch, Mario, Lammert, Frank, Miquel, Juan Francisco, Nervi, Flavio, Wittig, Michael, Rosskopf, Dieter, Timm, Birgit, Höll, Christine, Seeger, Marcus, ElSharawy, Abdou, Lu, Tim, Egberts, Jan, Fändrich, Fred, Fölsch, Ulrich R, Krawczak, Michael, Schreiber, Stefan, Nürnberg, Peter, Tepel, Jürgen, Hampe, Jochen
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container_issue 8
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container_title Nature genetics
container_volume 39
creator Buch, Stephan
Schafmayer, Clemens
Völzke, Henry
Becker, Christian
Franke, Andre
von Eller-Eberstein, Huberta
Kluck, Christian
Bässmann, Ingelore
Brosch, Mario
Lammert, Frank
Miquel, Juan Francisco
Nervi, Flavio
Wittig, Michael
Rosskopf, Dieter
Timm, Birgit
Höll, Christine
Seeger, Marcus
ElSharawy, Abdou
Lu, Tim
Egberts, Jan
Fändrich, Fred
Fölsch, Ulrich R
Krawczak, Michael
Schreiber, Stefan
Nürnberg, Peter
Tepel, Jürgen
Hampe, Jochen
description With an overall prevalence of 10–20%, gallstone disease (cholelithiasis) represents one of the most frequent and economically relevant health problems of industrialized countries 1 , 2 . We performed an association scan of >500,000 SNPs in 280 individuals with gallstones and 360 controls. A follow-up study of the 235 most significant SNPs in 1,105 affected individuals and 873 controls replicated the disease association of SNP A-1791411 in ABCG8 (allelic P value P CCA = 4.1 × 10 −9 ), which was subsequently attributed to coding variant rs11887534 (D19H). Additional replication was achieved in 728 German ( P = 2.8 × 10 −7 ) and 167 Chilean subjects ( P = 0.02). The overall odds ratio for D19H carriership was 2.2 (95% confidence interval: 1.8–2.6, P = 1.4 × 10 −14 ) in the full German sample. Association was stronger in subjects with cholesterol gallstones (odds ratio = 3.3), suggesting that His19 might be associated with a more efficient transport of cholesterol into the bile.
doi_str_mv 10.1038/ng2101
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We performed an association scan of &gt;500,000 SNPs in 280 individuals with gallstones and 360 controls. A follow-up study of the 235 most significant SNPs in 1,105 affected individuals and 873 controls replicated the disease association of SNP A-1791411 in ABCG8 (allelic P value P CCA = 4.1 × 10 −9 ), which was subsequently attributed to coding variant rs11887534 (D19H). Additional replication was achieved in 728 German ( P = 2.8 × 10 −7 ) and 167 Chilean subjects ( P = 0.02). The overall odds ratio for D19H carriership was 2.2 (95% confidence interval: 1.8–2.6, P = 1.4 × 10 −14 ) in the full German sample. Association was stronger in subjects with cholesterol gallstones (odds ratio = 3.3), suggesting that His19 might be associated with a more efficient transport of cholesterol into the bile.</abstract><cop>New York</cop><pub>Nature Publishing Group US</pub><pmid>17632509</pmid><doi>10.1038/ng2101</doi><tpages>5</tpages></addata></record>
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identifier ISSN: 1061-4036
ispartof Nature genetics, 2007-08, Vol.39 (8), p.995-999
issn 1061-4036
1546-1718
language eng
recordid cdi_proquest_miscellaneous_877597770
source MEDLINE; Nature; SpringerLink Journals - AutoHoldings
subjects Adult
Aged
Agriculture
Animal Genetics and Genomics
ATP Binding Cassette Transporter, Sub-Family G, Member 8
ATP-Binding Cassette Transporters - genetics
ATP-Binding Cassette Transporters - metabolism
Biological and medical sciences
Biological transport
Biomedical and Life Sciences
Biomedicine
Cancer Research
Cholelithiasis - genetics
Cholelithiasis - metabolism
Cholesterol
Cholesterol - metabolism
Diagnosis
Fundamental and applied biological sciences. Psychology
Gallstones
Gastroenterology. Liver. Pancreas. Abdomen
Gene Function
Genetic aspects
Genetic Predisposition to Disease
Genetics of eukaryotes. Biological and molecular evolution
Genomics
Health problems
Human Genetics
Humans
letter
Liver
Liver. Biliary tract. Portal circulation. Exocrine pancreas
Medical sciences
Middle Aged
Other diseases. Semiology
Physiological aspects
Polymorphism, Single Nucleotide
Population genetics
Single nucleotide polymorphisms
title A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease
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